KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:28 2014 Check: 00 .. Name: ENSTTRP00000011732/1-357 Len: 630 Check: 6788 Weight: 1.00 Name: BACU006756/1-385 Len: 630 Check: 2383 Weight: 1.00 Name: ENSP00000405482/1-492 Len: 630 Check: 9957 Weight: 1.00 Name: bmy_21957T0/1-451 Len: 630 Check: 1767 Weight: 1.00 Name: ENSBTAP00000041790/1-492 Len: 630 Check: 9606 Weight: 1.00 // 1 50 ENSTTRP00000011732/1-357 WC-------- ---------- ---------- ---------- -----FFATW BACU006756/1-385 -MQKRAE--- ---------- ---------- ---------- ---------- ENSP00000405482/1-492 MATKPTEPVT ILSLRKLSLG TAEPQVKEPK TFTVEDAVET IGFGRFHIAL bmy_21957T0/1-451 MAAKRTEPVT IISLRELNLG TPEPQPKESK TFTVEDAVET IGFGRFHIAL ENSBTAP00000041790/1-492 MTAKQTEPVT IVSLRELNLG TPEPQPRESK TFTVEEAVET IGFGRFHIAL 51 100 ENSTTRP00000011732/1-357 Y--------- ---------- ------SASS LASWQTDMAA ---------- BACU006756/1-385 ---------- ---------- ---------- ---------- ---------- ENSP00000405482/1-492 FLIMGSTGVV EAMEIMLIAV VSPVIRCEWQ LENWQVALVT TMVFFGYMVF bmy_21957T0/1-451 FLIMGSTGVA EAMEIMLIAV VSPVIRCEWQ LENWQVALVT TMVFFGYMVF ENSBTAP00000041790/1-492 FLIMGSTGVA EAMEIMLIAV VSPAIRCEWQ LENWQVALVT TMVFFGYMVF 101 150 ENSTTRP00000011732/1-357 ---------- -GR------- ---------- ---------- ---------- BACU006756/1-385 ---------- ---------- ---------- ---------- ---------- ENSP00000405482/1-492 SILFGLLADR YGRWKILLIS FLWGAYFSLL TSFAPSYIWF VFLRTMVGCG bmy_21957T0/1-451 SILFGLLADR YGRWKILLIS FLWGAYFSLL TSFSPSYIWF VFLRTMVGCG ENSBTAP00000041790/1-492 SVLFGLLADR YGRWKILFIS FLWGAYFSLL TSFSPSYIWF VFLRTMVGCG 151 200 ENSTTRP00000011732/1-357 -------LII KTEVLPTKYR GYMFPLSQVF WRAGSLLII- LASVVIPTIG BACU006756/1-385 ---------- ---------- ---------- ---------- ---------- ENSP00000405482/1-492 VSGHSQGLII KTEFLPTKYR GYMLPLSQVF WLAGSLLIIG LASVIIPTIG bmy_21957T0/1-451 VSGHAQGLII KTEFLPTKYR GYMLPLSQVF WLAGSLLVIS LASVVIPTIG ENSBTAP00000041790/1-492 VSGHSQGLII KTEFLPTKYR GYMLPLSQVF WLAGSLLIIG LASVVVPTIG 201 250 ENSTTRP00000011732/1-357 WRWLICIASI PGIILIMAFM FIPESAWFGV STRNTQAALV TLERITKMNR BACU006756/1-385 ---------- ---------- ---------- --GTDTKSSS TVSQ------ ENSP00000405482/1-492 WRWLIRVASI PGIILIVAFK FIPESARFNV STGNTRAALA TLERVAKMNR bmy_21957T0/1-451 WRWLIRITSI PGIILTMAFM FIPESARFNV STGNTQAALV TLERIAKMNR ENSBTAP00000041790/1-492 WRWLIRIASI PGIILIMAFK FIPESARFNV STGNTQAALA TLERIAKMNR 251 300 ENSTTRP00000011732/1-357 SVMPEGKLVE PILEERGRFT DLLDAKYLQT TLQIWVIWLG ISFAYDGVML BACU006756/1-385 ---------- ---EKRGRFT DLLDAKYLRT TLQIWVIWLG ISFAYYGVIL ENSP00000405482/1-492 SVMPEGKLVE PVLEKRGRFA DLLDAKYLRT TLQIWVIWLG ISFAYYGVIL bmy_21957T0/1-451 SVMPEGKLVE PILEKRGRFT DLLDAKYLRT TLQIWVIWLG ISFAYYGVIL ENSBTAP00000041790/1-492 SVMPEGKLVE PILEKRGRFA DLLDAKYLRT TLQIWVIWLG ISFAYYGVIL 301 350 ENSTTRP00000011732/1-357 ASAELPERDL ACGSRSESEA VVTVGVSEES QSPCHCQVFA PSDYQTMIIS BACU006756/1-385 ASAELLERDL VCGSRSELEV VVTVGVSEES QSPCHCQVFA PSDYQTMIIS ENSP00000405482/1-492 ASAELLERDL VCGSKSDSAV VVTGGDSGES QSPCYCHMFA PSDYRTMIIS bmy_21957T0/1-451 ASAELLERDL VCGSRSESEA VVTVGVSEES QSPCHCQVFA PSDYQTMIIS ENSBTAP00000041790/1-492 ASAELLERDL VCGSRSESEV AVTVGVLEES QSPCYCHMFA PSDYRTMIIS 351 400 ENSTTRP00000011732/1-357 TIGEIALNPL TILGINFLGR RLSLSITVGC TALFFLLLNI CTSS-GLIGF BACU006756/1-385 TIGEIALNPL NILGINFLGR RLSLSITMGC TALFFLLLNI CTSSAGLIGF ENSP00000405482/1-492 TIGEIALNPL NILGINFLGR RLSLSITMGC TALFFLLLNI CTSSAGLIGF bmy_21957T0/1-451 TVGEIALNPL NILGINFLGR RLSLSITMGC TALFFLLLNI CTSSAGLIGF ENSBTAP00000041790/1-492 TIGEIALNPL NILGINFLGR RLSLSITMGC TALFFLLLNI CTSSAGLIGF 401 450 ENSTTRP00000011732/1-357 LFMLRALVAS N-NTICIYTA EVYPTTMRAL GMGTGGSSCR IGAMVTPFMS BACU006756/1-385 LFMLRALVAS NFNTIYIYTA EVYPTTMRAL GMGTSGSLCR IGAVVEPFIS ENSP00000405482/1-492 LFMLRALVAA NFNTVYIYTA EVYPTTMRAL GMGTSGSLCR IGAMVAPFIS bmy_21957T0/1-451 LFMLRALVAS NFNTIYIYTA EVYPTTMRAL GMGXSGSLCR IGAMVXPFIS ENSBTAP00000041790/1-492 LFMLRALVAA NFNTIYIYTA EVYPTAMRAL GMGTSGSLCR IGAMVAPFIS 451 500 ENSTTRP00000011732/1-357 QVLTSAS--- ---------- ------FLGA L-LFSSVCVV CAIS------ BACU006756/1-385 QAEEEAAEIT RKLEKQEKKH LKKEKKRLAA IAPAPSESSS RTLEECEETS ENSP00000405482/1-492 QVLMSAS--- ---------- ------ILGA LCLFSSVCVV CAIS------ bmy_21957T0/1-451 Q--------- ---------- ---------- ---------- ---------- ENSBTAP00000041790/1-492 QVLMSAS--- ---------- ------FLGA LCLFASVCVV CAIS------ 501 550 ENSTTRP00000011732/1-357 ---------- ---------- ---AFTLPIE TKGRAPQQLK IK-------- BACU006756/1-385 ERPKKKQKPQ EAPQENGMED PSVSFSKPPK NKSFSEEELV SSDLEETAGS ENSP00000405482/1-492 ---------- ---------- ---AFTLPIE TKGRALQQIK ---------- bmy_21957T0/1-451 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000041790/1-492 ---------- ---------- ---AFTLPIE TKGRALQQIK ---------- 551 600 ENSTTRP00000011732/1-357 ---------- ---------- ---------- ---------- ---------- BACU006756/1-385 GSLSKKKKSF PKEEPVSDPE ESGNKRSPGK RGNSLPRRSH STRAAAPRKR ENSP00000405482/1-492 ---------- ---------- ---------- ---------- ---------- bmy_21957T0/1-451 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000041790/1-492 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000011732/1-357 ---------- ---------- ---------- BACU006756/1-385 KSSETFPRKI RMDISLVGHN LRTYFPTHPL ENSP00000405482/1-492 ---------- ---------- ---------- bmy_21957T0/1-451 ---------- ---------- ---------- ENSBTAP00000041790/1-492 ---------- ---------- ----------