KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:31 2014 Check: 00 .. Name: ENSP00000333019/1-500 Len: 556 Check: 5411 Weight: 1.00 Name: ENSBTAP00000041803/1-457 Len: 556 Check: 5658 Weight: 1.00 Name: bmy_20784T0/1-459 Len: 556 Check: 8062 Weight: 1.00 Name: ENSTTRP00000013520/1-391 Len: 556 Check: 2472 Weight: 1.00 Name: BACU006323/1-428 Len: 556 Check: 274 Weight: 1.00 // 1 50 ENSP00000333019/1-500 MVGRSCGVAT QRQGGGQRPT NLALTLSSSP AHSTALPWLP PRSLQLLSGH ENSBTAP00000041803/1-457 MSGTRASNDR PPSAGGVKRG RL-------- ---------- ---------- bmy_20784T0/1-459 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013520/1-391 ---------- ---------- ---------- ---------- ---------- BACU006323/1-428 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000333019/1-500 SVPAQPTPHL PSACGGPTRV TLGEERAWRS HGSNAGGHTC LPRRTAGAGS ENSBTAP00000041803/1-457 -------QHE AATTGSRVTV VLGAQWGDEG KGKVVDLLAT DADVVSRC-- bmy_20784T0/1-459 ---------- ---------- ---------- ---------M LSQFVFCS-- ENSTTRP00000013520/1-391 ---------- ---------- ---------- ---------- ---------- BACU006323/1-428 ---------- ----GSRVTV VLGAQWGDEG KGKVVDLLAT DADIISRC-- 101 150 ENSP00000333019/1-500 LTPGGERGGN NAGHTVVVDG KEYDFHLLPS GIINTKAVSF IGNGVVIHLP ENSBTAP00000041803/1-457 ------QGGN NAGHTVVVDG KEYDFHLLPS GIINPKAVSF IGNGVVVHLP bmy_20784T0/1-459 ------QGGN NAGHTVVVDG KEYDFHLLPS GIINTKAVSF IGNGVVVHLP ENSTTRP00000013520/1-391 -------GGN NAGHTVVVDG KEYDFHLLPS GIINTKAMSF IGNGVVVHLP BACU006323/1-428 ------QGGN NAGHTVVVDG KEYDFHLLPS GIINTKAMSF IGNGVVVHLP 151 200 ENSP00000333019/1-500 GLFEEAEKNE KKGLKDWEKR LIISDRAHL- ---------- ---------- ENSBTAP00000041803/1-457 GLFEEAEKNE KKGLKDWEKR LVISDRAHL- ---------- ---------- bmy_20784T0/1-459 GLFEEAEKNE KKGLKDWEKR LIISDRAHLG ESQALPAHLS GSLPPLADGE ENSTTRP00000013520/1-391 GLFEEAEKNE KK-MKDWEKR LILSDRAHL- ---------- ---------- BACU006323/1-428 GLFEEAEKNE KKGLKDWEKR LIISDRAHL- ---------- ---------- 201 250 ENSP00000333019/1-500 ---------- ---------- ---------- VFDFHQAVDG LQEVQRQAQE ENSBTAP00000041803/1-457 ---------- ---------- ---------- VFDFHQAVDG LQEVQRQAQE bmy_20784T0/1-459 IEARGTPVRP QRPCNRLSLP LVVPPPARPA VFDFHQAVDG LQEVQRQAQE ENSTTRP00000013520/1-391 ---------- ---------- ---------- VFDFHQAVDG LQEVQRQAQE BACU006323/1-428 ---------- ---------- ---------- VFDFHQAVDG LQEVQRQAQE 251 300 ENSP00000333019/1-500 GKN-----IG TTKKGIGPTY SSKAARTGLR ICDLLSDFDE FSSRFKNLAH ENSBTAP00000041803/1-457 GKN-----IG TTRKGIGPAY SSKAARTGLR ICDLLSDFDE FSSRFKNLAR bmy_20784T0/1-459 GKNLWPFSIG TTRKGIGPAY SSKAARTGLR ICDLLSDFDE FSTRFKNLAH ENSTTRP00000013520/1-391 GKN-----IG TTRKGIGPAY SSKAARTGLR ICDLLSDFDE FSTRFKNLAH BACU006323/1-428 GKN-----IG TTRKGIGPAY SSKAARTGLR ICDLLSDFDE FSTRFKNLAH 301 350 ENSP00000333019/1-500 QHQSMFPTLE IDIEGQLKRL KGFAERIRPM VRDGVYFMYE ALHGPPKKIL ENSBTAP00000041803/1-457 QHQSMFPSLE VDVEGQLKRL KGFAERIRPM VRDGVYFMYE ALHGPPKKIL bmy_20784T0/1-459 QHQSMFPTLE IDVEGQLKKL KGFVERIRPM VRDGVYFMYE ALHGAPKKIL ENSTTRP00000013520/1-391 QHQSMFPTLE IDVEGQLKRL KGFAERIRPM VRDGVYFMYE ALHGAPKKIL BACU006323/1-428 QHQSMFPTLE IDVEGQLKKL KGFVERIRPM VRDGVYFMYE ALHGAPKKIL 351 400 ENSP00000333019/1-500 VEGANAALLD IDFGTYPFVT SSNCTVGGVC TGLGIPPQNI GDVYGVVKAY ENSBTAP00000041803/1-457 VEGANAALLD IDFGTYPFVT SSNCTVGGVC TGLGIPPQNI GEVYGVVKAY bmy_20784T0/1-459 VEGANAALLD IDFGTYPFVT SSNCTVGGVC TGLGIPPQNI GEVYGVVKAY ENSTTRP00000013520/1-391 VEGANAALLD IDFGTY-VVT SSNCTVGGVC TGLGIPPQNI GEVYGVVKAY BACU006323/1-428 VEGANAALLD IDFGTYPFVT SSNCTVGGVC TGLGIPPQNI GEVYGVVKAY 401 450 ENSP00000333019/1-500 TTRVGIGAFP TEQINEIGGL LQTRGHEWGV TTGRKRRCGW LDLMILRYAH ENSBTAP00000041803/1-457 TTRVGIGAFP TEQINEIGDL LQSRGHEWGV TTGRKRRCGW LDLMILRYAH bmy_20784T0/1-459 TTRVGIGAFP TEQINEIGDL LQSRGHEWGV TTGRKRRCGW LDLMILRYAH ENSTTRP00000013520/1-391 TTRVGIGAFP TEQINEIGDL LQSRGHEWGV TTGRKRRCGW LDLMTLRYAH BACU006323/1-428 TTRVGIGAFP TEQINEIGDL LQSRGHEWGV TTGRKRRCGW LDLMILRYAH 451 500 ENSP00000333019/1-500 MVNGFTALAL TKLDILDVLG EVKVGVSYKL NGKRIPYFPA NQEMLQKVEV ENSBTAP00000041803/1-457 MVNGFTALAL TKLDILDALD EIKVGVAYKL GGKRIPYFPA NQEILQKVEV bmy_20784T0/1-459 MVNGFTALAL TKLDILDALD EIKVGVAYKL SGKRIPYFPA NQEILQKVEV ENSTTRP00000013520/1-391 MVNGFTALAL TKLDILDVLD EIKVGIAYKL SGKRIPYFPA NQEILQKVEV BACU006323/1-428 MVNGFTALAL TKLDILDALD EIKVGVAYKL SGKRIPYFPA NQEILQKVEV 501 550 ENSP00000333019/1-500 EYETLPGWKA DTTGARRWED LPPQAQNYIR FVENHVGVAV KWVGVGKSRE ENSBTAP00000041803/1-457 EYETLPGWKA DTTGARKWED LPPQAQSYIR FVENHVGVAV KWVGVGKSRD bmy_20784T0/1-459 EYETLPGWKA DTAGARKWED LPPQAQSYIR FVENHVGVAV KWVGVGKSRD ENSTTRP00000013520/1-391 EYETLPGWKA DTTGARKWED LPPQAQNYIR FVENHVGVAV KWVGVGKSRD BACU006323/1-428 EYETLPGWKA DTTGARKWED LPPHAQSYIR FVENHVGVAV KWVGVGKSRD 551 600 ENSP00000333019/1-500 SMIQLF ENSBTAP00000041803/1-457 SMIQLF bmy_20784T0/1-459 SMIQLF ENSTTRP00000013520/1-391 SMIQLF BACU006323/1-428 SMIQLF