KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:31 2014 Check: 00 .. Name: ENSTTRP00000007153/1-117 Len: 145 Check: 9271 Weight: 1.00 Name: ENSP00000335074/1-117 Len: 145 Check: 92 Weight: 1.00 Name: ENSBTAP00000041811/1-133 Len: 145 Check: 1613 Weight: 1.00 Name: bmy_00431T0/1-86 Len: 145 Check: 8276 Weight: 1.00 Name: BACU015172/1-145 Len: 145 Check: 8612 Weight: 1.00 // 1 50 ENSTTRP00000007153/1-117 MPSPGTVCSL LLFSVLWVDL AMAGSSFLSP EHQKVQQRKE SKKPSAKPKP ENSP00000335074/1-117 MPSPGTVCSL LLLGMLWLDL AMAGSSFLSP EHQRVQQRKE SKKPPAKLQP ENSBTAP00000041811/1-133 MPAPWTICSL LLLSVLCMDL AMAGSSFLSP EHQKLQ-RKE AKKPSGRLKP bmy_00431T0/1-86 ---------- ---------- ---------- -------RKE SKKLSAKPKP BACU015172/1-145 MPSPGTICSL LLLSVLWVDL AMAGSSFLSP EHQKVQQRKE SKKLSAKPKP 51 100 ENSTTRP00000007153/1-117 RALEGWLDAD VRSQAEGAGD ELEIQXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000335074/1-117 RALAGWLRPE DGGQAEGAED ELEVRFNAPF DVGIKLSGVQ YQQHSQALGK ENSBTAP00000041811/1-133 RTLEGQFDPE VGSQAEGAED ELEIRFNAPF NIGIKLAGAQ SLQHGQTLGK bmy_00431T0/1-86 RALEGWLDAE VRSQAEGAGD ELEIQFSAPF DVGIKLSGAH SHQHGQTLGK BACU015172/1-145 RALEGWLDAE VRSQAEGAGD ELEIQFSAPF DVGIKLSGAH SHQHGQTLGK 101 150 ENSTTRP00000007153/1-117 XXXXXXXXXX XXTPAHK--- ---------- ---------- ----- ENSP00000335074/1-117 FLQDILWEEA KEAPADK--- ---------- ---------- ----- ENSBTAP00000041811/1-133 FLQDILWEEA EAHLLRPLWK GSQTGGQREE SRHS------ ----- bmy_00431T0/1-86 FLQDVLWEDA SAKSFLQFPR SPN------- ---------- ----- BACU015172/1-145 FLQDVLWEDA SGKSFLQFPR SPNVSPPMGD KTEVFFPIPA SQKSF