KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:32 2014 Check: 00 .. Name: ENSTTRP00000002569/1-478 Len: 545 Check: 4116 Weight: 1.00 Name: ENSBTAP00000041815/1-479 Len: 545 Check: 8293 Weight: 1.00 Name: ENSP00000371297/1-494 Len: 545 Check: 7084 Weight: 1.00 Name: bmy_08908T0/1-497 Len: 545 Check: 2486 Weight: 1.00 Name: BACU015616/1-542 Len: 545 Check: 562 Weight: 1.00 // 1 50 ENSTTRP00000002569/1-478 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000041815/1-479 GPLGRSGLAV ---------- ---------- ---------- ---FAQCPQL ENSP00000371297/1-494 ---------- ---------- ---------- ---------- -----MAMSL bmy_08908T0/1-497 ---------- ---------- ---------- ---------- -----MAMSL BACU015616/1-542 MPVGSGGGGA GQARASCPAL WAAPLSMFTA PGTPLIPTLT RTHSLMAMSL 51 100 ENSTTRP00000002569/1-478 ---------- -----RTSPP VSVRDAHGTS SLSSSSNSGS CKGSDSSPTP ENSBTAP00000041815/1-479 PTSQNEHLPL LPASRRTSPP VSVRDAYGTS SLSSSSNSGS CKGSDSSPTP ENSP00000371297/1-494 PGSRRTS--- AGSRRRTSPP VSVRDAYGTS SLSSSSNSGS YKGSDSSPTP bmy_08908T0/1-497 PGSRRAS--- AGSRRRTSPP VSVRDAHGTS SLSSSSNSGS CKGSDSSPTP BACU015616/1-542 PGSRRAS--- AGSRRRTSPP VSVRDAHGTS SLSSSSNSGS CKGSDSSPTP 101 150 ENSTTRP00000002569/1-478 RRAMKYTLCS DNHGIKXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000041815/1-479 RRSMKYTLCS DNHGIKPPTP EQYLTPLQQK EVCIRHLKAR LKDTQDRLQD ENSP00000371297/1-494 RRSMKYTLCS DNHGIKPPTP EQYLTPLQQK EVCIRHLKAR LKDTQDRLQD bmy_08908T0/1-497 RRAMKYTLCS DNHGIKPPTP EQYLTPLQQK EVCIRHLKAR LKDTQDRLQD BACU015616/1-542 RRAMKYTLCS DNHGIKPPTP EQYLTPLQQK EVCIRHLKAR LKDTQDRLQD 151 200 ENSTTRP00000002569/1-478 XDTEIDDLKM QLSRMQEDWI EEECHRVEAQ LALKEARKEI KQLKQVIDTV ENSBTAP00000041815/1-479 RDTEIDDLKT QLSRMQEDWI EEECHRVEAQ LALKEARKEI KQLKQVIDTV ENSP00000371297/1-494 RDTEIDDLKT QLSRMQEDWI EEECHRVEAQ LALKEARKEI KQLKQVIDTV bmy_08908T0/1-497 RDTEIDDLKM QLSRMQEDWI EEECHRVEAQ LALKEARKEI KQLKQVIDTV BACU015616/1-542 RDTEIDDLKM QLSRMQEDWI EEECHRVEAQ LALKEARKEI KQLKQVIDTV 201 250 ENSTTRP00000002569/1-478 KNNLIDKDKG LQKYFVDINI QNKKLETLLH SMEVAQNGFA KEDGAAESAG ENSBTAP00000041815/1-479 KNNLIDKDKG LQKYFVDINI QNKKLETLLH SMEVAQNGLA KEDGAGESAG ENSP00000371297/1-494 KNNLIDKDKG LQKYFVDINI QNKKLETLLH SMEVAQNGMA KEDGTGESAG bmy_08908T0/1-497 KNSLIDKDKG LQKYFVDINI QNKKLETLLH SMEVAQNGFA KEDGAAESAG BACU015616/1-542 KNSLIDKDKG LQKYFVDINI QNKKLETLLH SMEVAQNGFA KEDGAAESAG 251 300 ENSTTRP00000002569/1-478 GSPARSLTRS STYTKLSDPA VCGDRLPGDH PGASVEDGAD SGFAATDDTL ENSBTAP00000041815/1-479 GSPARSLTRS STYTKLSDPA VCGDRPPGDH PGTSAEDGVD SGFAANDDTL ENSP00000371297/1-494 GSPARSLTRS STYTKLSDPA VCGDRQPGDP SSGSAEDGAD SGFAAADDTL bmy_08908T0/1-497 GSPARSLTRS STYTKLSDPA VCGDRLPGDH PGVSVEDGAD SGFVATDDTL BACU015616/1-542 GSPARSLTRS STYTKLSDPA VCGDRLPGDH PGASVEDGAD SGFVATDDTL 301 350 ENSTTRP00000002569/1-478 SRTDALEASS LLSSGVDCGP EEGSSLHGSF SLGPRFPASN TYEKLLCGTE ENSBTAP00000041815/1-479 SRTEALEASS LLS------- ---------- -LGPRFPASN TYEKLLCGTE ENSP00000371297/1-494 SRTDALEASS LLSSGVDCGT EE-TSLHSSF GLGPRFPASN TYEKLLCGME bmy_08908T0/1-497 SRTDALEASS LLSSGVDCGP EEGSSLHGSF SLGPRFPASN TYEKLLCGTE BACU015616/1-542 SRTDALEASS LLSSGVDCGP EEGSSLQGSF SLGPRFPASN TYEKLLCGTE 351 400 ENSTTRP00000002569/1-478 AGVQASCMQE RAIQTDFVQY QPDLDTILEK VTKAQVSGTV PKSGDRCPEL ENSBTAP00000041815/1-479 AGVQASCMQE RAIQTDFVPS QPDLDTILEK VTQAQVCGMV PESGDRRLEP ENSP00000371297/1-494 AGVQASCMQE RAIQTDFVQY QPDLDTILEK VTQAQVCGTD PESGDRCPEL bmy_08908T0/1-497 AGVQASCMQE RAIQTDFVQY QPDLDTILEK VTKAQVCGTV PKPGDRCLES BACU015616/1-542 AGVQASCMQE RAIQTDFVQY QPDLDTILEK VTKAQVCGTV PKPGDRCPES 401 450 ENSTTRP00000002569/1-478 DPHPLGPRDP NSAVVVTVGD ELEAPEPITR GPTPHHPGAN PNPSPSVGVA ENSBTAP00000041815/1-479 DPHPPGPRDP NSAVVVTVGD ELEAPEPITW GPTPHHPGAH PNPSPSVSVA ENSP00000371297/1-494 DAHPSGPRDP NSAVVVTVGD ELEAPEPITR GPTPQRPGAN PNPGQSVSVV bmy_08908T0/1-497 DPHPLGPRDP NSAVVVMVGD ELEAPEPITR GPTPHHPSAN PNPSLSVSVA BACU015616/1-542 DPHPLGPRDP NSAVVVMVGD ELEAPEPITR GPTPHHPGAN PNPSPSVSVA 451 500 ENSTTRP00000002569/1-478 CPVEEEEEAA AAEKEPRSYW SRHYIVDLLA VVVPAVPTVA WLCRSQSRQG ENSBTAP00000041815/1-479 CPVEEEEEAA TAEKEPKSYW SRHYIVDLLA VVVPAVPTVA WLCRSQRRQG ENSP00000371297/1-494 CPMEEEEEAA VAEKEPKSYW SRHYIVDLLA VVVPAVPTVA WLCRSQRRQG bmy_08908T0/1-497 CPVEEEEEAA AAEKEPKSYW SRHYIVDLLA VVVPAVPTVA WLCRSQRRQG BACU015616/1-542 CPVEEEEEAA AAEKEPKSYW SRHYIVDLLA VVVPAVPTVA WLCRSQRRQG 501 550 ENSTTRP00000002569/1-478 QPIYNISSLL RGCCTVALHS IRRISCRSLS QQGP--SPAG GSSQL ENSBTAP00000041815/1-479 QPIYNISSLL RGCCTVALHS IRRISCRSLS ---------- ----- ENSP00000371297/1-494 QPIYNISSLL RGCCTVALHS IRRISCRSLS QPSP--SPAG GGSQL bmy_08908T0/1-497 QPIYNISSLL RGCCTVALHS IRRISCRSLS QPGPSASTAG GSSQL BACU015616/1-542 QPIYNISSLL RGCCTVALHS IRRISCRSLS QQGPRASRAG GSSQL