KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:34 2014 Check: 00 .. Name: ENSTTRP00000005732/1-554 Len: 583 Check: 6957 Weight: 1.00 Name: ENSP00000419279/1-554 Len: 583 Check: 7621 Weight: 1.00 Name: ENSBTAP00000041851/1-553 Len: 583 Check: 4764 Weight: 1.00 Name: bmy_04319T0/1-553 Len: 583 Check: 1138 Weight: 1.00 Name: BACU006750/1-523 Len: 583 Check: 433 Weight: 1.00 // 1 50 ENSTTRP00000005732/1-554 ---------- ---------- ---------M MLSRAKHAVG RDLPHTDKRK ENSP00000419279/1-554 ---------- ---------- ---------M MLSRAKPAVG RGVQHTDKRK ENSBTAP00000041851/1-553 ---------- ---------- ---------- MLSRAKPAVG GDPPHTDKRK bmy_04319T0/1-553 MGTKTWRAPV LRRALLRNGP VPRRGCRGDR MLSRAKPAVG RDLPHTDKRK BACU006750/1-523 ---------- ---------- ---------M MLSRAKPAVG RDLPHTDKRK 51 100 ENSTTRP00000005732/1-554 KKGRKIPKLE ELLSQRDFTG AITLLEFKRH VGEQEEDTNL WIGYCAFHLG ENSP00000419279/1-554 KKGRKIPKLE ELLSKRDFTG AITLLEFKRH VGEEEEDTNL WIGYCAFHLG ENSBTAP00000041851/1-553 KKGRKIPKLE ELLSQRDFTG AITLLEFKRH VGEQEEDTNL WIGYCAFHLG bmy_04319T0/1-553 KKGRKIPKLE ELLSQRDFTG AITLLEFKRH VGEQEEDTNL WIGYCAFHLG BACU006750/1-523 KKGRKIPKLE ELLSQRDFTG AITL------ ---------- ---------- 101 150 ENSTTRP00000005732/1-554 DYKRALEEYE NATKEENCNP EVWVNLACTY FFLGMYKQAE AAGFKAPKSR ENSP00000419279/1-554 DYKRALEEYE NATKEENCNS EVWVNLACTY FFLGMYKQAE AAGFKASKSR ENSBTAP00000041851/1-553 DYKRALEEYE NATKDENCSP EVWVNLACTY FFLGMYKQAE AAGFKAPKSR bmy_04319T0/1-553 DYKRALEEYE NATKEENCNP EVWVNLACTY FFLGMYKQAE AAGFKAPKSR BACU006750/1-523 -----LEEYE NATKEENCNP EVWVNLACTY FFLGMYKQAE AAGFKAPKSR 151 200 ENSTTRP00000005732/1-554 LQNRLLFHLA HKFNDEKKLM NFHQNLQDIT EDQLSLASIH YMRSHYQEAI ENSP00000419279/1-554 LQNRLLFHLA HKFNDEKKLM SFHQNLQDVT EDQLSLASIH YMRSHYQEAI ENSBTAP00000041851/1-553 LQNRLLFHLA HKFNDEKKLM NFHQNLQDIT EDQLSLASIH YMRSHYQEAI bmy_04319T0/1-553 LQNRLLFHLA HKFNDEKKLM NFHQNLQDIT EDQLSLASIH YMRSHYQEAI BACU006750/1-523 LQNRLLFHLA HKFNDEKKLM NFHQNLQDIT EDQLSLASIH YMRSHYQEAI 201 250 ENSTTRP00000005732/1-554 DIYKRILLDN REYLALNVYV ALCYYKLDYY DVSQEVLAVY LQQIPDSTIA ENSP00000419279/1-554 DIYKRILLDN REYLALNVYV ALCYYKLDYY DVSQEVLAVY LQQIPDSTIA ENSBTAP00000041851/1-553 DIYKRILLDN REYLALNVYV ALCYYKLDYY DVSQEVLAVY LQQIPDSTIA bmy_04319T0/1-553 DIYKRILLDN REYLALNVYV ALCYYKLDYY DVSQEVLA-- ---------- BACU006750/1-523 DIYKRILLDN REYLALNVYV ALCYYKLDYY DVSQEVLAVY LQQIPDSTIA 251 300 ENSTTRP00000005732/1-554 LNLKACNHFR LYNGKAAEAE LKSLMDNASS SFEFAKELIR HNLVVFRGGE ENSP00000419279/1-554 LNLKACNHFR LYNGRAAEAE LKSLMDNASS SFEFAKELIR HNLVVFRGGE ENSBTAP00000041851/1-553 LNLKACNHFR LYNGKAAEAE LKSLMDNASS SFEFAKELIR HNLVVFRGGE bmy_04319T0/1-553 ---------- --------AE LKSLMDNASS SFEFAKELIR HNLVVFRGGE BACU006750/1-523 LNLKACNHFR LYNGKAAEAE LKSLMDNASS SFEFAKELIR HNLVVFRGGE 301 350 ENSTTRP00000005732/1-554 GALQVLPPLV DVIPEARLNL VIYYLRQDDV QEAYNLVNDL EPTTPQEYIL ENSP00000419279/1-554 GALQVLPPLV DVIPEARLNL VIYYLRQDDV QEAYNLIKDL EPTTPQEYIL ENSBTAP00000041851/1-553 GALQVLPPLV DVIPEARLNL VIYYLRQDDV QEAYNLIKDL EPTTPQEYIL bmy_04319T0/1-553 GALQVLPPLV DVIPEARLNL VIYYLRQDDV QEAYNLIKDL EPTTPQEYIL BACU006750/1-523 GALQVLPPLV DVIPEARLNL VIYYLRQDDV QEAYNLIKDL EPTTPQEYIL 351 400 ENSTTRP00000005732/1-554 KGVVNAALGQ EMGSKDHMKI AQQFFQLVGG SASECDTIPG RQCMASCFFL ENSP00000419279/1-554 KGVVNAALGQ EMGSRDHMKI AQQFFQLVGG SASECDTIPG RQCMASCFFL ENSBTAP00000041851/1-553 KGVVNAALGQ EMCSRDHMKI AQQFFQLVGG SASECDTIPG RQCMASCFFL bmy_04319T0/1-553 KGVVNAALGQ EMGSKDHMKI AQQFFQLVGG SASECDTIPG RQCMASCFFL BACU006750/1-523 KGVVNAALGQ EMGSKDHMKI AQQFFQLVGG SASECDTIPG RQCMASCFFL 401 450 ENSTTRP00000005732/1-554 LKQFDDVLIY LNSFKSYFYN DDIFNFNYAQ AKAATGNTSE GEEIFLLIQS ENSP00000419279/1-554 LKQFDDVLIY LNSFKSYFYN DDIFNFNYAQ AKAATGNTSE GEEAFLLIQS ENSBTAP00000041851/1-553 LKQFDDVLIY LNSFKSYFYN DDIFNFNYAQ AKAATGNTSE GEEVFLLIQS bmy_04319T0/1-553 LKQFDDVLIY LNSFKSYFYN DDIFNFNYAQ AKAATGNTSE GEEIFLLIQS BACU006750/1-523 LKQFDDVLIY LNSFKSYFYN DDIFNFNYAQ AKAATGNTSE GEEIFLLIQS 451 500 ENSTTRP00000005732/1-554 EKMKNDYIYL SWLARCYIMN KKPRLAWELY LKMETSGESF SLLQLIANDC ENSP00000419279/1-554 EKMKNDYIYL SWLARCYIMN KKPRLAWELY LKMETSGESF SLLQLIANDC ENSBTAP00000041851/1-553 EKMKNDYIYL SWLARCYIMN KKPRLAWELY LKMETSGESF SLLQLIANDC bmy_04319T0/1-553 EKMKNDYIYL SWLARCYIMN KKPRLAWELY LKMETSGESF SLLQLIANDC BACU006750/1-523 EKMKNDYIYL SWLARCYIMN KKPRLAWELY LKMETSGESF SLLQLIANDC 501 550 ENSTTRP00000005732/1-554 YKXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXETL ENSP00000419279/1-554 YKMGQFYYSA KAFDVLERLD PNPEYWEGKR GACVGIFQMI IAGREPKETL ENSBTAP00000041851/1-553 YKMGQFYYSA KAFDVLERLD PNPEYWEGKR GACVGIFQMI LAGREPKETL bmy_04319T0/1-553 YKMGQFYYSA KAFDVLERLD PNPEYWEGKR GACVGIFQMI LAGREPKETL BACU006750/1-523 YKMGQFYYSA KAFDVLERLD PNPEYWEGKR GACVGIFQMI LAGREPKETL 551 600 ENSTTRP00000005732/1-554 REVLHLLRST GNTQVEYIIR IMKKWAKENR VPV ENSP00000419279/1-554 REVLHLLRST GNTQVEYMIR IMKKWAKENR VSI ENSBTAP00000041851/1-553 REVLHLLRST GNPQVEYIVR IMKKWAKENR VPV bmy_04319T0/1-553 REVLHLLRST GNTQVEYIIR IMKKWAKENR VPV BACU006750/1-523 REVLHLLRST GNTQVEYIIR IMKKWAKENR VPV