KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:35 2014 Check: 00 .. Name: ENSTTRP00000009843/1-592 Len: 592 Check: 3868 Weight: 1.00 Name: ENSP00000346298/1-592 Len: 592 Check: 2432 Weight: 1.00 Name: ENSBTAP00000041891/1-592 Len: 592 Check: 319 Weight: 1.00 Name: bmy_14851T0/1-543 Len: 592 Check: 2488 Weight: 1.00 Name: BACU002458/1-592 Len: 592 Check: 3629 Weight: 1.00 // 1 50 ENSTTRP00000009843/1-592 MDEARPLWAT PLQFVFACIS YAVGLGNVWR FPYLCQMYGG GSFLVPYIIM ENSP00000346298/1-592 MEKARPLWAN SLQFVFACIS YAVGLGNVWR FPYLCQMYGG GSFLVPYIIM ENSBTAP00000041891/1-592 MEKTRPLWAT PLQFVFACIS YAVGLGNVWR FPYLCQMYGG GSFLVPYIIM bmy_14851T0/1-543 ---------- ---------- ---------- ---------- ---------M BACU002458/1-592 MDEARPLWAT PLQFVFACIS YAVGLGNVWR FPYLCQMYGG GSFLVPYIIM 51 100 ENSTTRP00000009843/1-592 LTVEGMPLLY LELAVGQRMR QGSIGAWRTI NPYLSGVGVA SVVVSFFLSM ENSP00000346298/1-592 LIVEGMPLLY LELAVGQRMR QGSIGAWRTI SPYLSGVGVA SVVVSFFLSM ENSBTAP00000041891/1-592 LVVEGMPLLY LELAVGQRMR QGSIGAWRTV SPYLSGVGVA SVVVSFFLCM bmy_14851T0/1-543 LTVEGMPLLY LELAVGQRMR QGSIGAWRTI SPYLSGVGVA SVVVSFFLSM BACU002458/1-592 LAVEGMPLLY LELAVGQRMR QGSIGAWRTI SPYLSGVGVA SVVVSFFLSM 101 150 ENSTTRP00000009843/1-592 YYNVINAWAF WYLFHSFQDP LPWSVCPLNG NRTGYDEECE KASSTQYFWY ENSP00000346298/1-592 YYNVINAWAF WYLFHSFQDP LPWSVCPLNG NHTGYDEECE KASSTQYFWY ENSBTAP00000041891/1-592 YYNVVNAWAF WYLFHSFQDP LPWSVCPLNG NRTGYIEECE KASSTQYFWY bmy_14851T0/1-543 YYNVINAWAF WYLFHSFQDP LPWSVCPLNG NRTGYDEECE KASSTQYFWY BACU002458/1-592 YYNVINAWAF WYLFHSFQDP LPWSVCPLNG NRTGYDEECE KASSTQYFWY 151 200 ENSTTRP00000009843/1-592 RKTLNISPSI QESGAVQWEP ALCLILAWLL VYLCILRGTE STGKVVYFTA ENSP00000346298/1-592 RKTLNISPSL QENGGVQWEP ALCLLLAWLV VYLCILRGTE STGKVVYFTA ENSBTAP00000041891/1-592 RKTLNISPSI QESGAVQWEP ALCLILAWLV VYLCILRGTE STGRVVYFTA bmy_14851T0/1-543 RKTLNISPSI QESGAVQWEP ALCLILAWLL VYLCILRGTE STGKVVYFTA BACU002458/1-592 RKTLNISPSI QESGAVQWEP ALCLILAWLL VYLCILRGTE STGKVVYFTA 201 250 ENSTTRP00000009843/1-592 LLPYCVLIVY LVRGLTLHGA TNGLAYMFTP KMEQLANPKA WINAATQIFF ENSP00000346298/1-592 SLPYCVLIIY LIRGLTLHGA TNGLMYMFTP KIEQLANPKA WINAATQIFF ENSBTAP00000041891/1-592 LLPYCVLIIY LVRGLTLHGA TNGLAYMFTP KMEQLANPKA WINAATQIFF bmy_14851T0/1-543 LLPYCVLIIY LVRGLTLHGA TNGLAYMFTP KMEQLANPKA WINAATQIFF BACU002458/1-592 LLPYCVLMIY LVRGLTLHGA TNGLAYMFTP KVEQLANPKA WINAATQIFF 251 300 ENSTTRP00000009843/1-592 SLGLGFGSLI AFASYNEPSN NCQKHAVIVS IINSSTSIFA SVVTFSIYGF ENSP00000346298/1-592 SLGLGFGSLI AFASYNEPSN NCQKHAIIVS LINSFTSIFA SIVTFSIYGF ENSBTAP00000041891/1-592 SLGLGFGSLI AFASYNEPSN NCQKHAIIVS IINSSTSIFA SIVTFSIYGF bmy_14851T0/1-543 SLGLGFGSLI AFASYNEPSN NCQKHAVIVS IINSFTSIFA SVVTFSIYGF BACU002458/1-592 SLGLGFGSLI AFASYNEPSN DCQKHTVIVS IINSSTSIFA SVVTFSIYGF 301 350 ENSTTRP00000009843/1-592 KATFNYESCL NXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000346298/1-592 KATFNYENCL KKVSLLLTNT FDLEDGFLTA SNLEQVKGYL ASAYPSKYSE ENSBTAP00000041891/1-592 KATFNYESCL NKVILLLTNS FDLEDGFLTA NNLEQVKDYL ASAYPSKYSE bmy_14851T0/1-543 KATFNYESCL NKVILLLTNS FDLEDGFLTV SNLEEVKSYL ASAYPSKYSE BACU002458/1-592 KATFNYESCL NKVILLLTNS FDLEDGFLTV SNLEEVKSYL ASAYPSKYSE 351 400 ENSTTRP00000009843/1-592 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000346298/1-592 MFPQIKNCSL ESELDTAVQG TGLAFIVYTE AIKNMEVSQL WSVLYFFMLL ENSBTAP00000041891/1-592 VFPQIKNCSL ETELETAVQG TGLAFIVYTE AIKNMEVSQL WSVLYFFMLL bmy_14851T0/1-543 VFPQIKNCSL ESELETAVQG TGLAFIVYTE AIKNMEVSQL WSVLYFFMLL BACU002458/1-592 VFPQIKNCSL ESELETAVQG TGLAFIVYTE AIKNMEVSQL WSVLYFFMLL 401 450 ENSTTRP00000009843/1-592 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXLVCLV SCAIGLVFTM ENSP00000346298/1-592 MLGIGSMLGN TAAILTPLTD SKIISSHLPK EAISGLVCLV NCAIGMVFTM ENSBTAP00000041891/1-592 LLGIGSMLGN TAAILTPLTD SKVISSYLPK EAISGLVCLA NCAIGMLFTM bmy_14851T0/1-543 MLGIGSMLGN TAAILTPLTD SKVISSYLPK EAISGLVCLV NCAIGLVFTM BACU002458/1-592 MLGIGSMLGN TAAILTPLTD SKVISSYLPK EAISGLVCLV NCAIGLVFTM 451 500 ENSTTRP00000009843/1-592 EAGNYWFDIF NDYAATLPLL LIVLVEAAAV CYLYGLRRFE SDLKAMTGHA ENSP00000346298/1-592 EAGNYWFDIF NDYAATLSLL LIVLVETIAV CYVYGLRRFE SDLKAMTGRA ENSBTAP00000041891/1-592 EAGSYWFDIF NDYAATLSLL LIVLAETVAV CYLYGLSRFE SDLKAMTGRA bmy_14851T0/1-543 EAGNYWFDIF NDYAATLSLL LIVLVETVAV CYLYGLRRFE SDLKAMTGHA BACU002458/1-592 EAGNYWFDIF NDYAATLSLL LIVLVETVAV CYLYGLRRFE SDLKAMTGHA 501 550 ENSTTRP00000009843/1-592 LNWYWKAMWG GVSPLLIISL FVFYLSDYII TGTLQYQAWD ASQGQLVTKD ENSP00000346298/1-592 VSWYWKVMWA GVSPLLIVSL FVFYLSDYIL TGTLKYQAWD ASQGQLVTKD ENSBTAP00000041891/1-592 LNWYWKAMWG GVSPLLIISL FIFYLSDYIS TGTLRYQAWD AAQGQLVTKD bmy_14851T0/1-543 LNWYWKAMWG GVSPLLIISL FVFYLSDYII TGTLQYQAWD ASQGQLVTKD BACU002458/1-592 LNWYWKAMWG GVSPLLIISL FVFYLSDYII TGTLQYQAWD ASQGQLVTKD 551 600 ENSTTRP00000009843/1-592 YPPYALAIIG LLVASSTMCI PLGALGTFIV RRLKRRDTAS VA ENSP00000346298/1-592 YPAYALAVIG LLVASSTMCI PLAALGTFVQ RRLKRGDADP VA ENSBTAP00000041891/1-592 YPPHALAVIG LLVAASTMCI PLGALGTLIT RRLKRGDTAP VA bmy_14851T0/1-543 YPPYALAIIG LLVASSTMCI PLGALGTFIV RHLKRGDTAS VA BACU002458/1-592 YPPYALAIIG LLVASSTMCI PLGALGTFIV RHLKRGDTAS VA