KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:52:36 2014 Check: 00 .. Name: ENSTTRP00000012553/1-992 Len: 1014 Check: 160 Weight: 1.00 Name: ENSBTAP00000041893/1-934 Len: 1014 Check: 3939 Weight: 1.00 Name: bmy_20805T0/1-483 Len: 1014 Check: 6406 Weight: 1.00 Name: BACU012849/1-738 Len: 1014 Check: 2697 Weight: 1.00 // 1 50 ENSTTRP00000012553/1-992 MSLPKTPSTS TPEGKNVKIS ASKEETGLPK LREKKSLVDP SKPLPTSLQN ENSBTAP00000041893/1-934 MSLPKTPSTS TPEGKNLKIS ASKEETGLPE LKEKKILVDR SQPLPTSLQN bmy_20805T0/1-483 ---------- ---------- ---------- ---------- ---------- BACU012849/1-738 MSLPKTPSTS TPEDKNLKIS ASKEETGLPN LREKKSLVDP SKPLPTSLQN 51 100 ENSTTRP00000012553/1-992 EFIPQEVLLS LTYTANAGPC PENLLPPKK- KTPKGTLPRP VDHVWHNPIR ENSBTAP00000041893/1-934 EFIPEEVLLS LTNAANAGPC PENLLPPKKI KTPKGTLPRS VDHVWHNPVR bmy_20805T0/1-483 ---------- ---------- ---------- ---------- ---------- BACU012849/1-738 EFIPQEVLLS LTYAANAGPC PENLLPPKKI KTPKGTLPRP VDHVWHNPIR 101 150 ENSTTRP00000012553/1-992 RNKFKYLIDH PVSLTGAGXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000041893/1-934 RNKFKYLIDH PVSLTGAGRD ISFLYDVKYV KGETRESVVC PPQTDHALQA bmy_20805T0/1-483 ---------- ---------- ---------- ---------- ---------- BACU012849/1-738 RNKFKYLIDH PVSLTGAGRD ISFLYDVKYV KGETRESTVC PPQMDRSLQP 151 200 ENSTTRP00000012553/1-992 XXXXXXXXXP KKLTDTLIPE EFHIVSNTGV SGLECYDXXX XXXXXXXXXX ENSBTAP00000041893/1-934 RDGIIVPHKP KKLTDTLIPE EFHIVSNTGV SGLECFDDKY TTLLTDSENR bmy_20805T0/1-483 ---------- ---------- ---------- ---------- ---------- BACU012849/1-738 RDGVLVPHKP KKLSDTLIPE EFHIVSNTGV SGLECYDDKY TTLLTDSENR 201 250 ENSTTRP00000012553/1-992 XXXXXXXKPN KRVEVVQLND VMDAMLERAG VENQAYTGPT KMHKLFHILK ENSBTAP00000041893/1-934 LLLFPSMKPN KRIEVVQLND VMDTMLERAG VENQEYTGPT KMHKLLHILK bmy_20805T0/1-483 ---------- ---------- ---------- ---------- ---------- BACU012849/1-738 LLLFPSMKPN KRVEVVQLND VMDTMLERAG VENRAYTGPT KMHKLLHILK 251 300 ENSTTRP00000012553/1-992 KEQTIYNIVF HELIRQVSVD CADRGELLSK IRERYVQMLD QIAWHMTDFY ENSBTAP00000041893/1-934 KEQTIYNTVF HELIRQVSVD CADRGELLSK IRERYVQMLD QIARQMIDFY bmy_20805T0/1-483 ---------- ---------- ---------- -------MLD QIAWHMTDFY BACU012849/1-738 KEQTIYNTVF HELIRQVSVD CADRGELLSK IRERYVQMLD QIAWHMTDFY 301 350 ENSTTRP00000012553/1-992 KDMVTQRVMD QRILEELYNF NNVIEELIRE LCLVQAHDMK LTKEAEKAHR ENSBTAP00000041893/1-934 KDMVTQRVMD QRILEELYNF KNVIEELTRE LCLVRAHDIK LTKEAEKAHR bmy_20805T0/1-483 KDMVTQRVMD QRILEELYNF KNVIEELTRE LCLVRAHDMK LTKEAEKAHX BACU012849/1-738 KDMVTQRVMD QRILEELYNF KNVIEELTRE LCLVRAHDMK LTKEAEKAHR 351 400 ENSTTRP00000012553/1-992 ALAQALLDAE KNARIVEEYH DLYTLQRGRM ESDIKQLMAE RDIWSSATYE ENSBTAP00000041893/1-934 DLAQALLDAE KNARIVEEYH DLYTLQRERM ESDIKQLMAE RDIWSSATYE bmy_20805T0/1-483 ALAQALLDAE KNARIVEEYH DLYTLQRGRM ESDIKQLTAE RDIWSSATYE BACU012849/1-738 ALAQALLDAE KNARIVEEYH DLYTLQRGRM ESDIKQLMAE RDIWSSATYE 401 450 ENSTTRP00000012553/1-992 LSVKXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXDT ADVALLQKLT ENSBTAP00000041893/1-934 LSVKVIERNK VLLAKRLYLN EKSWNNYTKH FIVLLSSKDT SDLALLQKLT bmy_20805T0/1-483 LSVKVIERNN VMLAKRLYLN EKGWNKYTKH FIILLSTKDT ADLALLQKLT BACU012849/1-738 LSIKVIERNN VMLAKRLYLN EKGWNKYTKH FIILLSTKDT ADLALLQKLT 451 500 ENSTTRP00000012553/1-992 EKWRNLVNKF KQEVEENEES TREKLQSVKD GLVKWQQFF- --SGKGILSP ENSBTAP00000041893/1-934 QKWKILVNKF QQEVERNEEA TRERLQSVKD GLVKWQQFF- --SEKDILSP bmy_20805T0/1-483 EKWRNLVNKF KQEVEQNEES TREKLQSVKD GLVKWQQFFR NNTGKDILSP BACU012849/1-738 EKWRNLVNKF KQEVEQNEES TREKLQSVKD GLVKWQQFFR NNTGKDILSP 501 550 ENSTTRP00000012553/1-992 SKENRFESVV QDFKQWQK-V TEKRQ-FSGD LL--KYDCLX XXXXXXXXXX ENSBTAP00000041893/1-934 HKQKTLESIV PDFKQWLTML TEDRDKFSGD LLVSKYDSLK IIKRLQENWT bmy_20805T0/1-483 SKENTFESVV PDFKQWRKML TEDKDKFSGD LLVSKYASLK IIKHLQESWT BACU012849/1-738 SKENRFESVV PDFKQWRKML TEDKDKFSGD LLVSKYASLK IIKHLQESWA 551 600 ENSTTRP00000012553/1-992 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXISK ENSBTAP00000041893/1-934 DIGLGIFGRH KSMEGNIPPE QKLMEEILKN IARLYKEFEI RINGDNGTSK bmy_20805T0/1-483 DIGLGIFSRH KSMEGRIPPE QKHMEEIVKS TGRLYEEFEI RINGDN---- BACU012849/1-738 DIGLGIFSRH KSMEGKIPPE QKHMEEIVKS TGRLYKEFEI RINGDNGISK 601 650 ENSTTRP00000012553/1-992 ILPSLVSSLE FCSFKLKRLL EFPELLLEEW EGLNEKINEM KSQLDASLNV ENSBTAP00000041893/1-934 ILPTLISSFE FCSFKLESLL EFPDLLLEEW EGLNEKINEM KSQLDSSLYI bmy_20805T0/1-483 ---DLVSSLE FCFFKLENLL EFPELLLEEW EGLNEKINEM KSQLDAS--- BACU012849/1-738 ILPDLVSSLE FCFFKLENLL EFPELLLEEW EGLNEKINEM KSQLDVSLNI 651 700 ENSTTRP00000012553/1-992 IGTVPQYRDV DSGSXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXMDELH ENSBTAP00000041893/1-934 IGTVPQYIDM DSGLELQTHI FNMVQQWLLK IGGEINNGNM ELQRQMDELH bmy_20805T0/1-483 ---------- ----VLQTRI FNMIQQWLLK TGNEINNGNM ELQHQMDELH BACU012849/1-738 IGTVPQYIDV DSGSVLQARI FNMIQQWLLK TGNEINNGNM ELQCQVCTCR 701 750 ENSTTRP00000012553/1-992 IPMVQWMVNF LILMVPDFPD PDTLIKLEEE SAEKRDLGIA KLELDAIALA ENSBTAP00000041893/1-934 IPMIQWMVNL LILMIPDFPD PDILISL-EN SAEKRDLGIA KLELDAMALA bmy_20805T0/1-483 IPMIQWMVNL LILMVPDFPD PDTLIKLEEE SAEKRDLGIA KLELDAIALA BACU012849/1-738 --------NL LDYFLP---- ---------- ---------- ---------- 751 800 ENSTTRP00000012553/1-992 KMLSRYSIYL SSCCKEMVTA MALSKADHLG KNPTKELNEL DKMKRECYEW ENSBTAP00000041893/1-934 KKLSQYSSYL SSCCKELVVA MAVNKASHLE KNPDKELNEL EKMK------ bmy_20805T0/1-483 KKLSQYSIYL SSCWKEMVTA MAPSKAGHLE KNPTKELNEL DKMK------ BACU012849/1-738 --------WL GVFFKEKPSY AYPIEAGGWE GK-------- ---------- 801 850 ENSTTRP00000012553/1-992 ITTCSHLLSG LKGRKIKLLT REEKWHLLGE EDTVKEVTTP ETGKLLKKDE ENSBTAP00000041893/1-934 ---------- ---------- ---------- ---------- ---------- bmy_20805T0/1-483 ---------- ---------- ---------- ---------- ---------- BACU012849/1-738 ---------- ---------- ---------- ---------- ---------- 851 900 ENSTTRP00000012553/1-992 ENMEDKKLEE EKEEEKAEEK PSTSTEKEKL IRVIGVDGNV HSQPLFGTDV ENSBTAP00000041893/1-934 ---------- ---------K PSTSTEKEKI IRVIGEDENI HSQPLYGTDA bmy_20805T0/1-483 ---------- ---------- ---------- ---------- ---------- BACU012849/1-738 ---------- ---------- ---------- ---------- -----MGTYI 901 950 ENSTTRP00000012553/1-992 LPSWRESANE GTLAPRYLET MAVIERMQEK LIEVESRARQ AEEKFDDVNE ENSBTAP00000041893/1-934 LSSWRESAHQ GTLAPKYLEA MAILDRTQEK LIEVESRARQ AEERFDDVNE bmy_20805T0/1-483 ---------- ---------- ---------- ---------- ---------- BACU012849/1-738 I--------- ---------- ---------- ---------- ---------- 951 1000 ENSTTRP00000012553/1-992 KLHYTLIRNK ELRKNRGNT- ---------- ---DEVREGE EEENEEEEIR ENSBTAP00000041893/1-934 RLHYTLIRNK ELEKELEEVL MKYKVKESEV EEEENEAERE EEKEEEEEIR bmy_20805T0/1-483 ---------- ---------- ---------- ---------- ---------- BACU012849/1-738 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSTTRP00000012553/1-992 PVERASKSPK KGHC ENSBTAP00000041893/1-934 PQDRSSKSPK KGE- bmy_20805T0/1-483 ---------- ---- BACU012849/1-738 ---------- ----