KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:36 2014 Check: 00 .. Name: bmy_01100T0/1-270 Len: 325 Check: 895 Weight: 1.00 Name: ENSTTRP00000011899/1-324 Len: 325 Check: 3371 Weight: 1.00 Name: BACU014563/1-280 Len: 325 Check: 2333 Weight: 1.00 Name: ENSP00000306817/1-322 Len: 325 Check: 8266 Weight: 1.00 Name: ENSBTAP00000041897/1-325 Len: 325 Check: 4881 Weight: 1.00 // 1 50 bmy_01100T0/1-270 ---------- ------MALG KALLGCTCKK PARGNWRLEK ---------- ENSTTRP00000011899/1-324 MAASGEPGRQ WQE-EVAAAA VVVVGSCMTD LVSLTSRLPK TGETIHGHKF BACU014563/1-280 MAASGEPGRQ WQE-KVAAAL VVVVGSCMTD LVSLTSRLPK TGETIHGHKF ENSP00000306817/1-322 MAASGEPQRQ WQE---EVAA VVVVGSCMTD LVSLTSRLPK TGETIHGHKF ENSBTAP00000041897/1-325 MAASGDPGRQ WQEEEAETAA AVVVGSCMTD LVSLTSRLPK TGETIHGHKF 51 100 bmy_01100T0/1-270 ---------- ---DAARPDE -----SEVGK DSFGNDYIEN LKKNDISTEF ENSTTRP00000011899/1-324 FIGFGGKGAN QCVQAARLGA KTSMVCKVGK DSFGNDYIEN LKQNDISTXX BACU014563/1-280 FIGFGGKGAN QCVQAARLGA KTSMVCKVGK DSFGNDYIEN LKQNDISTEF ENSP00000306817/1-322 FIGFGGKGAN QCVQAARLGA MTSMVCKVGK DSFGNDYIEN LKQNDISTEF ENSBTAP00000041897/1-325 FIGFGGKGAN QCVQAARLGA KTSMVCKVGK DSFGNDYIEN LKQNDISTEF 101 150 bmy_01100T0/1-270 TYQTKDAATG TASIIVSNEG QNIIVIVAGA NLLLNTEDLR EAASAISRAK ENSTTRP00000011899/1-324 XXXXXXXXXX XXXXXXXXXX QNIIVIVAGA NLLLNTEDLR EAASAISRAK BACU014563/1-280 TYQTKDAATG TASIIVSNEG QNIIVIVAGA NLLLNTEDLR EAASTISRAK ENSP00000306817/1-322 TYQTKDAATG TASIIVNNEG QNIIVIVAGA NLLLNTEDLR AAANVISRAK ENSBTAP00000041897/1-325 TYQTKDAATG AASIIVDNEG QNIIVIVAGA NLLLNTEDLR EAASAISRAK 151 200 bmy_01100T0/1-270 VMICQLEVTP AASLEALRIA HSSGVKTLFN PAPAIADLDP QFYTLSDVFC ENSTTRP00000011899/1-324 VMICQLEVTP AASLEALRIA HSSGVKTLFN PAPAIADLDP QFYTLSDVFC BACU014563/1-280 VMICQLEVTP AASLEALRIA HSSGVKTLFN PAPAIADLDP QFYTLSDVFC ENSP00000306817/1-322 VMVCQLEITP ATSLEALTMA RRSGVKTLFN PAPAIADLDP QFYTLSDVFC ENSBTAP00000041897/1-325 VMICQLEVTP ATSLEALRIA HSNGVKTLFN PAPAIADLDP EFYTLSDVFC 201 250 bmy_01100T0/1-270 CNESEAEILT SLEVGSPSDA GKAALVLMER GCQVVIITLG AEGCVMLSQT ENSTTRP00000011899/1-324 CNESEAEILT SLEVSSPSDA GKAALVLMER GCQVVIITLG AEGCVMMSQK BACU014563/1-280 CNESEAEILT SLEVGSPSDA GKAALVLMER GCRVVIITLG AEGCVMLSQT ENSP00000306817/1-322 CNESEAEILT GLTVGSAADA GEAALVLLKR GCQVVIITLG AEGCVVLSQT ENSBTAP00000041897/1-325 CNESEAEILT GLEVCSPTDA GRAALVLLER GCQVVIITLG AEGCVMLSQT 251 300 bmy_01100T0/1-270 EPVPKHIPTE NVKAVDTTHS LLKFLPVLHK TVQLLHKSGK EELIHLGTEM ENSTTRP00000011899/1-324 EPVPKHIPTE NVKAVDTTGA GDSFVGALAF YLAYYPNLSL EEMLKRSNFI BACU014563/1-280 EPVPKHIPTE NVKAVDTTCP G--------- ---------- ----HQCDDM ENSP00000306817/1-322 EPEPKHIPTE KVKAVDTTGA GDSFVGALAF YLAYYPNLSL EDMLNRSNFI ENSBTAP00000041897/1-325 EPVPKHIPTE KVKAVDTTGA GDSFVGALAF YLAYYSHLSL EEMLKRSNFI 301 350 bmy_01100T0/1-270 VAVAADVLG- -SVWKT---- ----- ENSTTRP00000011899/1-324 AAVSVQAIGT QSSYPYKKDL PLDLF BACU014563/1-280 A--------- -VSW------ ----- ENSP00000306817/1-322 AAVSVQAAGT QSSYPYKKDL PLTLF ENSBTAP00000041897/1-325 AAVSVQVTGT QSSYPYKKDL PLDLF