KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:37 2014 Check: 00 .. Name: bmy_01110T0/1-281 Len: 332 Check: 5993 Weight: 1.00 Name: ENSP00000335628/1-313 Len: 332 Check: 4210 Weight: 1.00 Name: ENSBTAP00000041918/1-301 Len: 332 Check: 2483 Weight: 1.00 Name: BACU019426/1-312 Len: 332 Check: 927 Weight: 1.00 Name: ENSTTRP00000007816/1-313 Len: 332 Check: 1217 Weight: 1.00 // 1 50 bmy_01110T0/1-281 MRHNQLCCET PPTVTVHVKS GSNRSHQPKK PINLKRPIFK DSWPATEKNA ENSP00000335628/1-313 MRHNQMCCET PPTVTVYVKS GSNRSHQPKK PITLKRPICK DNWQAFEKNT ENSBTAP00000041918/1-301 MRHNQLCCET PPTVTVHVKS GSNRLHQPKK PITLKRPIFK DSWPASEKNA BACU019426/1-312 MRHNQLCCET PPTVTVYVKS GSNRSHQPKK PINLKRPIFK DSWPASEKNA ENSTTRP00000007816/1-313 MRHNQLCCET PPTVTVHVKS ESNRSQQPKK PINLKRPIFK DSWPASEKNA 51 100 bmy_01110T0/1-281 HNSNKSKRPK GPCLVIQRQE MTAFFKLFGN LFSKDKSQLS FVVDDDLIQD ENSP00000335628/1-313 HNNNKSKRPK GPCLVIQRQD MTAFFKLF-- ---------- ---DDDLIQD ENSBTAP00000041918/1-301 HNSNKSKRPK GPCLVIQRQE MTAFFKLF-- ---------- ---DDDLIQD BACU019426/1-312 HNSNKSKRPK GPCLVIRRQE MTAFFKLF-- ---------- ---DDDLIQD ENSTTRP00000007816/1-313 HNSDKSKRPK GPCLVIQRQE MTAFFKLF-- ---------- ---DDDLIQD 101 150 bmy_01110T0/1-281 FLWMDCCCKI ADKYLLAMTF VYFKRAK-FT INEHTRINFF IALTGYMHKN ENSP00000335628/1-313 FLWMDCCCKI ADKYLLAMTF VYFKRAK-FT ISEHTRINFF IAL--YLANT ENSBTAP00000041918/1-301 FLWMDCCCKI ADK----IGK IKLRKIKCFP RSQK------ -----YLANT BACU019426/1-312 FLWMDCCCKI ADKYLLAMTF VYFKRAK-FT INEHTRINFF IAL--YLANT ENSTTRP00000007816/1-313 FLWMDCCCKI ADKYLLAMTF VYFKRAK-FT INEHTRINFF IAL--YLANT 151 200 bmy_01110T0/1-281 IH-------- ------LSAN IYMLSPNIAL TIKQE----- NLKAGVSRK- ENSP00000335628/1-313 VEEDEEETKY EIFPWALGKN WRKLFPNF-L KLRDQLWDRI DYRAIVSRRC ENSBTAP00000041918/1-301 VEEDEEESKY EIFPWALGKN WRKLFPDF-L KLRDQLWDRI DYRAIVSRRC BACU019426/1-312 VEEDEEEAKY EIFPWALGKN WRKLFPDF-L KLRDKLWDRI DYRAIVSRRC ENSTTRP00000007816/1-313 VEEDEEESKY EIFPWALGKN WRKLFPDF-L KLRDKLWDRI DYRAIVSRRC 201 250 bmy_01110T0/1-281 ---VMAIAPT HYIWQRERSV HHSGAVRNYH RDEVQLPRGP SATPVDCSLC ENSP00000335628/1-313 CEEVMAIAPT HYIWQRERSV HHSGAVRNYN RDEVQLPRGP SATPVDCSLC ENSBTAP00000041918/1-301 CEEVMAIAPT HYIWQRERSV HHSGAVRNYN RDEVQLPRGP SATPVDCSLC BACU019426/1-312 CEEVMAIAPT HYIWQRERSV HHSGAVRNYH RDEVQLPRGP SATPVDCSLC ENSTTRP00000007816/1-313 CEEVMAIAPT HYIWQRERSV HHSGAVRNYH RDEVQLPRGP SATPVDCSLC 251 300 bmy_01110T0/1-281 GRKGRYVRLG LSSSSSSSSD TVEVVEKHSQ ESHNSFSMDI IVDPSQAYSY ENSP00000335628/1-313 GKKRRYVRLG LSSSSSLSSH TAGVTEKHSQ DSYNSLSMDI IGDPSQAYTG ENSBTAP00000041918/1-301 GKKGRYVRLG LSSSSSSSSD TLEVVEKHSQ ESHNSFSVDK IVDTSQAYSY BACU019426/1-312 GRKGRYVRLG LSSSSSSSSD TVEVVEKHSQ ESHNSFSMDI IVDPSQAYSY ENSTTRP00000007816/1-313 GRKGRYVRLG LSSSSSSSSD TVEVVEKHSQ ESHNSFPMDI IVDPSQAYSC 301 350 bmy_01110T0/1-281 SQGMT----- ---------- ---------- -- ENSP00000335628/1-313 SEVVNDHQSN KGKKTNFLKK DKSMEWFTGS EE ENSBTAP00000041918/1-301 SQVANDHQSK KEKKTNFMKK DKSMEWFTGS EE BACU019426/1-312 SQ-ANDHQSN KEKKTNFMKK DKSMEWFTGS EE ENSTTRP00000007816/1-313 FQVANDHQSN KEKKTNFMKE DKSMEWFTGS EE