KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:52:37 2014 Check: 00 .. Name: ENSP00000374237/1-559 Len: 560 Check: 6925 Weight: 1.00 Name: ENSBTAP00000041934/1-525 Len: 560 Check: 5405 Weight: 1.00 Name: bmy_21156T0/1-327 Len: 560 Check: 1795 Weight: 1.00 Name: ENSTTRP00000014120/1-555 Len: 560 Check: 7622 Weight: 1.00 // 1 50 ENSP00000374237/1-559 MVEKILIHRI LTLFPNAIAR KLLLMLTFIL IFWIIYLASK DHTKFSFNLE ENSBTAP00000041934/1-525 ---------- ---------- ---------- -----YILFS SILQFLFSLR bmy_21156T0/1-327 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014120/1-555 -ISPVLSYKV LALFPNAVAR KLLLMLMFIL VFWVIYFSFK DFEKFLFSLR 51 100 ENSP00000374237/1-559 NHIILNQGNI FKKYSHSETP LCPAVSPKET ELRIKDIMEK LDQQIPPRPF ENSBTAP00000041934/1-525 NSISLNHWNI FRNSTYLEAP PNPEISPTET ELRIQRIMEK LDQLVPPRPF bmy_21156T0/1-327 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014120/1-555 NPISLNHWNT FRKSFYPEAP LDPEFSPTET ELRIKGIMEK LDQLIPPRPF 101 150 ENSP00000374237/1-559 THVNTTTSAT HSTATILNPQ DTYCRGDQLD ILLEVRDHLG HRKQYGGDFL ENSBTAP00000041934/1-525 TNVSSTTSAT HSRATVLSPR DTYCRGDRLD VLLEMRDHLG RRKEYGGDFL bmy_21156T0/1-327 ---------- --------MK EGGSKGGK-- ---KRRGREG KGEERRGEKI ENSTTRP00000014120/1-555 SHVSSTTSAT HSKATLLSPQ DTYCRGDQLD VLLEVRDHLG RRKEYDGDFL 151 200 ENSP00000374237/1-559 RARMYSTALM AGASGKVTDF NNGTYLVSFT LFWEGQVSLS LLLIHPSEGV ENSBTAP00000041934/1-525 RARIFSPGLK AGASGKVTDF SNGTYLVSFT LFWEGQVSLS VLLIHPSEGV bmy_21156T0/1-327 K--------- -----EIEYL DNES------ ---------- ---------- ENSTTRP00000014120/1-555 RARMSSPALK AGASGKVTDF NNGTYLVSFT LFWEGRVSLS LLLILPSEGV 201 250 ENSP00000374237/1-559 SALWRARNQG CDRIIFTGLF ANRSSNVFTE CGLTLNTNAE LCQYMDDRDQ ENSBTAP00000041934/1-525 SALWRARNQG YDRVNFTGQF ANGPSPVFSK CGLTLHTSAE LCEYLDDRDQ bmy_21156T0/1-327 ---------- --------QF VNGISRVLSK CGLTLLSSAE LCEYPHYRDQ ENSTTRP00000014120/1-555 SALWRARN-G YDRVMFTGQF ANGTSHVNTD CALVLNSNAE LCENLHYRDQ 251 300 ENSP00000374237/1-559 EAFYCVRPQH MPCEALTHMT TRTRNISYLS KEEWRLFHRS NIGVEMMKNF ENSBTAP00000041934/1-525 EAFYCLKPPR VPCEALTHVT TRSANISYIR QKEWALFHRS NVGVEMMKNF bmy_21156T0/1-327 EAFYCVKPPH VPCEALTHVT TRNANISYLR EKEWFLFRRS NMGLEIMKDF ENSTTRP00000014120/1-555 EAFYCVKPPC VPCEALTHVT TRNAHISYLR EKEWIIFRSS NMGLEIMKDF 301 350 ENSP00000374237/1-559 TPIEVIPCNK -SENIKKNCQ IGMKTPFPSG YTLKKMWITA FCKQIKFNET ENSBTAP00000041934/1-525 ASIKVLACGT ESKNIEAKCR LGMKSPFPSG YTVKRKWIAA FCKQIELNET bmy_21156T0/1-327 TSIE------ ---------- ---------- ---------- ----IELNET ENSTTRP00000014120/1-555 TSIEVLPCN- -SENIETNCQ LGRKAPFPSG YTVKRRWIAA FCKQIELNET 351 400 ENSP00000374237/1-559 KNINDCLERK LIYLMGDSTL HQWIYYLQKA VKTLKYFDHH GAGIFKTHVL ENSBTAP00000041934/1-525 KTINDCLKRK LIYLMGDSTL RQWIQYLPKM VKTLKDFDLH GVGPFKTHML bmy_21156T0/1-327 KNINDCLKRK LIYLMGDSTL ---------- --PLKCFDHH GAGIFKTHVL ENSTTRP00000014120/1-555 KNINDCLKRK LIYLMGDSTL RQWIHYLPKV VKTLKCFDRH GAGIFKTHVL 401 450 ENSP00000374237/1-559 LDVERHILIQ WKKHGHPFVT KKLFSVKDEN YIPREIDQVA GDKNTAIVIT ENSBTAP00000041934/1-525 LDAERHTLIQ WKKHGHPFVT QSLFSVKDDN YIPREIDRIA GDKDTAIVIT bmy_21156T0/1-327 LDXERHILIQ WKKHGHPFIT KNLFSVKDEN YIPREIDWVA GDNDTATVIT ENSTTRP00000014120/1-555 LDAERHILIQ WKKHGHPFIT KNLFSVKDEN YIPWEIDRVA GDNDTTIVIT 451 500 ENSP00000374237/1-559 LGQHFRPFPI NIFIRRAINI QKAIERLFLR SPETKVILKT ENTREIEQNA ENSBTAP00000041934/1-525 LGQHLRPFPI KIFIRRAINV QKAIERLFLR SPETKVILKT ENTRRMFDNA bmy_21156T0/1-327 LGQHFRPFPI KIFIHRAINV QKAIERLFLR SPETKVILKT ENTRGVSQNA ENSTTRP00000014120/1-555 LGQHFRPLPI KIFIRRAINV QKAIEHLFL- SPETKMILKT ENTRGMSQNA 501 550 ENSP00000374237/1-559 EMFSDFHGYI QNLIIRDIFV DLNVGIIDAW DMTIAYCTNN AHPPDYVIQN ENSBTAP00000041934/1-525 EMFSDFHGYI QNLIMRDIFM DLNVGIIDAW DMTIADSTNN IHPPDYVIEN bmy_21156T0/1-327 EMFSDFHGYI QNLTMRDIFV DLNVGIIDAW DMTIAYNTDN AHPPDYVIGN ENSTTRP00000014120/1-555 EMFSDFHGSI QNLIMRDVFV DLNVGIVDAW DMTIAYNTDN VHPPDYVIGN 551 600 ENSP00000374237/1-559 QIGMFLNYIC ENSBTAP00000041934/1-525 QINMFLNYIC bmy_21156T0/1-327 QINMFLNYIC ENSTTRP00000014120/1-555 QINMFLNYIC