KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:38 2014 Check: 00 .. Name: ENSP00000413064/1-302 Len: 302 Check: 2186 Weight: 1.00 Name: ENSBTAP00000041936/1-186 Len: 302 Check: 8237 Weight: 1.00 Name: bmy_05466T0/1-222 Len: 302 Check: 6224 Weight: 1.00 Name: BACU009133/1-190 Len: 302 Check: 7059 Weight: 1.00 Name: ENSTTRP00000013023/1-134 Len: 302 Check: 1576 Weight: 1.00 // 1 50 ENSP00000413064/1-302 MHCGPPDMVC ETKIVAAEDH EALPGAKKDA LLAAAGAMWP PLPAAPGPAA ENSBTAP00000041936/1-186 ---------- ---------- ---------- ---------- ----RPRGHS bmy_05466T0/1-222 ---------- -MAGLGRPSG LAGAGGPGSV FPVLVRGAIP TGSAPPTTHR BACU009133/1-190 ---------- ---------- ---------- ---------- ---RPPGHSP ENSTTRP00000013023/1-134 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000413064/1-302 APPAPPPAPV AQPHGGAGGA GPPGGRGVCI REFRAAEQEA ARRIFYDGIM ENSBTAP00000041936/1-186 ARPLP----- ---------- ---------- ---------- ---------- bmy_05466T0/1-222 APPLP----- ---------- ---------- ---------- ---------- BACU009133/1-190 GATSP----- ---------- ---------- ---------- ---------- ENSTTRP00000013023/1-134 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000413064/1-302 ERIPNTAFRG LRQHPRAQLL YALLAALCFA VSRSLLLTCL VPAALLGLRY ENSBTAP00000041936/1-186 ---------- ---------- ----AALCFA LTRSLLLTCL VPAGLLALRY bmy_05466T0/1-222 ---------- ---------- ----AALCFA LTRSLLLTCL VPAGLLGLRY BACU009133/1-190 ---------- ---------- ----AALCFA LTRSLPLTCL VPAGLLGLRY ENSTTRP00000013023/1-134 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000413064/1-302 YYSRKVIRAY LECALHTDMA DIEQYYMKPP GSCFWVAVLD GNVVGIVAAR ENSBTAP00000041936/1-186 YYSRKVVLAY LDCALHTDMA DIEQYYMKPP GSCFWVAVLD GNVVGIVAAR bmy_05466T0/1-222 YYSRKVVLAY LDSALHTDMA DIEQYYMKPP GSCFWVAVLD GNVVGIVAAR BACU009133/1-190 YYSRKVVLAY LDSALHTDMA DIEQYYVKPP GSCFWVAVLD GNVVGIVAAR ENSTTRP00000013023/1-134 ---------- --------MA DIEQYYMKPP GSCFWVAVLD GNVVGIVAAR 201 250 ENSP00000413064/1-302 AHEEDNTVEL LRMSVDSRFR GKGIAKALGR KVLEFAVVHN YSAVVLGTTA ENSBTAP00000041936/1-186 AHAADNTVEL LRMSVDSRFR GRGIAKALGR KVLEFALAHD YSAVVLGTTA bmy_05466T0/1-222 AHAADNTVEL LRMSVDSRFR GKGIAKALGR KVLEFALVRN YSAVVLGTTA BACU009133/1-190 AHAADNTVEL LRMSVDSRFR GKGIAKALGR KVLEFALVHN YSAVVLGTTA ENSTTRP00000013023/1-134 AHAADNTVEL LRMSVDSRFR GKGIAKALGR KVLEFALVHN YSAVVLGTTA 251 300 ENSP00000413064/1-302 VKVAAHKLYE SLGFRHMGAS DHYVLPGMTL SLAERLFFQV RYHRYRLQLR ENSBTAP00000041936/1-186 VKAAAHKLYE SLGFRHMGSS DRHVMPGMTL SLAERLFFQV RYHRYRLQL- bmy_05466T0/1-222 VKVAAHKLYE SLGFRHMGSS DRYVMPGMTL SLAERLFFQV RYHRYRLQLR BACU009133/1-190 VKVAAHKLYE SLGFRHMGSS DRYVMPGMTL SLAERLFFQV RYHRYRLQLR ENSTTRP00000013023/1-134 VKVAAHKLYE SLGFRHMGSS DRYVMPGMTL SLAERLFFQV RYHRYRLQLR 301 350 ENSP00000413064/1-302 EE ENSBTAP00000041936/1-186 -- bmy_05466T0/1-222 EE BACU009133/1-190 EE ENSTTRP00000013023/1-134 EE