KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:39 2014 Check: 00 .. Name: bmy_15757T0/1-426 Len: 565 Check: 6337 Weight: 1.00 Name: ENSP00000378529/1-496 Len: 565 Check: 2494 Weight: 1.00 Name: ENSTTRP00000008307/1-494 Len: 565 Check: 6002 Weight: 1.00 Name: BACU006472/1-493 Len: 565 Check: 1868 Weight: 1.00 Name: ENSBTAP00000041964/1-493 Len: 565 Check: 1982 Weight: 1.00 // 1 50 bmy_15757T0/1-426 -LGSWERRAP TWQGTRPSPR SALCSPGGGG DRCAPAAQAD GRHGPGLRAA ENSP00000378529/1-496 MDQDYERRL- ---------- ---------- ---------- ------LRQI ENSTTRP00000008307/1-494 MDQDYERRL- ---------- ---------- ---------- ------LRQI BACU006472/1-493 MDQDYERRL- ---------- ---------- ---------- ------LRQI ENSBTAP00000041964/1-493 MDQDYERRL- ---------- ---------- ---------- ------LRQI 51 100 bmy_15757T0/1-426 PAPADRHPER EYDAVAEMRR TLTPANSPVS SPSKHGDRFI PSRAGANWSV ENSP00000378529/1-496 VI----QNEN TMPRVTEMRR TLTPASSPVS SPSKHGDRFI PSRAGANWSV ENSTTRP00000008307/1-494 VI----QNEN TMPSVAEMRR TLTPANSPVS SPSKHGDRFI PSRAGANWSV BACU006472/1-493 VI----QNEN TMPCVAEMRR TLTPANSPVS SPSKHGDRFI PSRAGANWSV ENSBTAP00000041964/1-493 VI----QNEN TMPCVAEMRR TLTPANSPVS SPSKHGDRFI PSRAGANWSV 101 150 bmy_15757T0/1-426 NFHRINENEK SPSQNRKAKD ATSDNGKDGL AYSALLKNEL LGAGIEKVQD ENSP00000378529/1-496 NFHRINENEK SPSQNRKAKD ATSDNGKDGL AYSALLKNEL LGAGIEKVQD ENSTTRP00000008307/1-494 NFHRI--NNE SPSQNRKAKD ATSDNGKDGL AYSALLKNEL LGAGIEKVQD BACU006472/1-493 NFHRINENEK SPSQNRKAKD ATSDNGKDGL AYSALLKNEL LGAGIEKVQD ENSBTAP00000041964/1-493 NFHRINENEK SPSQNRKAKD ATSDNGKDGL AYSALLKNEL LGAGIEKVQD 151 200 bmy_15757T0/1-426 PQTEDRRLQP STPERKGLFT YSLSAKRSSP DDGNDVSPYS LSPVSNKSQK ENSP00000378529/1-496 PQTEDRRLQP STPEKKGLFT YSLSTKRSSP DDGNDVSPYS LSPVSNKSQK ENSTTRP00000008307/1-494 PQTEDRRLQP STPERKGLFT YSLSTKRSSP DDGNDVSPYS LSPVSNKSQK BACU006472/1-493 PQTEDRRLQP STPERKGLFT YSLSAKRSSP DDGNDVSPYS LSPVSNKSQK ENSBTAP00000041964/1-493 PQTEDRRLQP STPERKGLFT YSLSTKRSSP DDGNDVSPYS LSPVSNKSQK 201 250 bmy_15757T0/1-426 LLRSPRKPTR KISKIPFKVL DAPELQDDFY LNLVDWSSLN VLSVGLGTCV ENSP00000378529/1-496 LLRSPRKPTR KISKIPFKVL DAPELQDDFY LNLVDWSSLN VLSVGLGTCV ENSTTRP00000008307/1-494 LLRSPRKPTR KISKIPFKVL DAPELQDDFY LNLVDWSSLN VLSVGLGTCV BACU006472/1-493 LLRSPRKPTR KISKIPFKVL DAPELQDDFY LNLVDWSSLN VLSVGLGTCV ENSBTAP00000041964/1-493 LLRSPRKPTR KISKIPFKVL DAPELQDDFY LNLVDWSSLN VLSVGLGTCV 251 300 bmy_15757T0/1-426 YLWSACTSQV TRLCDLSVEG DSVTSVGWSE RGNLVAVGTH KGFVQIWDAA ENSP00000378529/1-496 YLWSACTSQV TRLCDLSVEG DSVTSVGWSE RGNLVAVGTH KGFVQIWDAA ENSTTRP00000008307/1-494 YLWSACTSQV TRLCDLSVEG DSVTSVGWSE RGNLVAVGTH KGFVQIWDAA BACU006472/1-493 YLWSACTSQV TRLCDLSVEG DSVTSVGWSE RGNLVAVGTH KGFVQIWDAA ENSBTAP00000041964/1-493 YLWSACTSQV TRLCDLSVEG DSVTSVGWSE RGNLVAVGTH KGFVQIWDAA 301 350 bmy_15757T0/1-426 AGKKLSMLEG HTARVGEEPL GVPGVGGSRG AGSRRHPTLC PAAGALAWNA ENSP00000378529/1-496 AGKKLSMLEG HTARV----- ---------- ---------- ---GALAWNA ENSTTRP00000008307/1-494 AGKKLSMLEG HTARV----- ---------- ---------- ---GALAWNA BACU006472/1-493 AGKKLSTLEG HTARV----- ---------- ---------- ---GALAWNA ENSBTAP00000041964/1-493 AGKKLSMLEG HTARV----- ---------- ---------- ---GALAWNA 351 400 bmy_15757T0/1-426 DQLSSGSRDR MILQRDIRTP PLQSERRLQG HRQEVCGLKW STDHQLLASG ENSP00000378529/1-496 EQLSSGSRDR MILQRDIRTP PLQSERRLQG HRQEVCGLKW STDHQLLASG ENSTTRP00000008307/1-494 DQLSSGSRDR MILQRDIRTP PLQSERRLQG HRQEVCGLKW STDHQLLASG BACU006472/1-493 DQLSSGSRDR MILQRDIRTP PLQSERRLQG HRQEVCGLKW STDHQLLASG ENSBTAP00000041964/1-493 DQLSSGSRDR MILQRDIRTP PLQSERRLQG HRQEVCGLKW STDHQLLASG 401 450 bmy_15757T0/1-426 GNDNK----- ---------- ---VGPAPAL PPSPP----- ---------- ENSP00000378529/1-496 GNDNKLLVWN HSSLSPVQQY TEHLAAVKAI AWSPHQHGLL ASGGGTADRC ENSTTRP00000008307/1-494 GNDNKLLVWN HSSLSPVQQY TEHLAAVKAI AWSPHQHGLL ASGGGTADRC BACU006472/1-493 GNDNKLLVWN HSSLSPVQQY TEHLAAVKAI AWSPHQHGLL ASGGGTADRC ENSBTAP00000041964/1-493 GNDNKLLVWN HSSLSPVQQY TEHLAAVKAI AWSPHQHGLL ASGGGTADRC 451 500 bmy_15757T0/1-426 ---------A PLP------- -----WSR-- ---------- ---------- ENSP00000378529/1-496 IRFWNTLTGQ PLQCIDTGSQ VCNLAWSKHA NELVSTHGYS QNQILVWKYP ENSTTRP00000008307/1-494 IRFWNTLTGQ PLQCIDTGSQ VCNLAWSKHA NELVSTHGYS QNQILVWKYP BACU006472/1-493 IRFWNTLTGQ PLQCIDTGSQ VCNLAWSKHA NELVSTHGYS QNQILVWKYP ENSBTAP00000041964/1-493 IRFWNTLTGQ PLQCIDTGSQ VCNLAWSKHA NELVSTHGYS QNQILVWKYP 501 550 bmy_15757T0/1-426 ---------- ---------- ---------G DG-------- ---------- ENSP00000378529/1-496 SLTQVAKLTG HSYRVLYLAM SPDGEAIVTG AGDETLRFWN VFSKTRSTKV ENSTTRP00000008307/1-494 SLTQVAKLTG HSYRVLYLAM SPDGEAIVTG AGDETLRFWN VFSKTRSTKV BACU006472/1-493 SLTQVAKLTG HSYRVLYLAM SPDGEAIVTG AGDETLRFWN VFSKTRSTK- ENSBTAP00000041964/1-493 SLTQVAKLTG HSYRVLYLAM SPDGEAIVTG AGDETLRFWN VFSKTRSTK- 551 600 bmy_15757T0/1-426 ---------- ----- ENSP00000378529/1-496 KWESVSVLNL FTRIR ENSTTRP00000008307/1-494 KWESVSVLNL FTRIR BACU006472/1-493 --ESVSVLNL FTRIR ENSBTAP00000041964/1-493 --ESVSVLNL FTRIR