KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:42 2014 Check: 00 .. Name: ENSP00000387654/1-505 Len: 509 Check: 7486 Weight: 1.00 Name: ENSBTAP00000042008/1-508 Len: 509 Check: 6912 Weight: 1.00 Name: ENSTTRP00000001120/1-509 Len: 509 Check: 8153 Weight: 1.00 Name: BACU006037/1-442 Len: 509 Check: 3110 Weight: 1.00 Name: bmy_21585T0/1-361 Len: 509 Check: 6837 Weight: 1.00 // 1 50 ENSP00000387654/1-505 MGRVVAELVS SLLGLW---- LLLCSCGCPE GAELRAPPDK IAIIGAGIGG ENSBTAP00000042008/1-508 MDPAAPGLAC SILRL-GLGL LLLCSWWYPG SAEPRAPPEK IAVIGAGIGG ENSTTRP00000001120/1-509 MERTRGRLAC SPWGLWAGGC LLLCSWGFPG GAEPRAPPEN IAIIGAGIGG BACU006037/1-442 -----MRQAG HPRRLPGRAE RAPCASGALP ---------- -AIIGAGIGG bmy_21585T0/1-361 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000387654/1-505 TSAAYYLRQK FGKDVKIDLF EREEVGGRLA TMMVQGQEYE AGGSVIHPLN ENSBTAP00000042008/1-508 TSAAYYLRQK FGKDVKIDVF EKGKVGGRLA TLNVQGQEFE SGGSVIHPLN ENSTTRP00000001120/1-509 TSAAYYLRQK FGNDVKIDVF EKGEVGGRLA TVTMQGQEYE SGGSVIHPLN BACU006037/1-442 TSAAYYLRQK FGNDVRIDVF EKGEVGGRLA TVTMQGQEYE SGGSVIHPLN bmy_21585T0/1-361 MSAKFY---- ---------- ---------- ---------- ---------- 101 150 ENSP00000387654/1-505 LHMKRFVKDL GLSAVQASGG LLGIYNGETL VFEESNWFII NVIKLVWRYG ENSBTAP00000042008/1-508 LHMKRFVKDL GLSAVQSPSG LVGVYNGETL VYEESSWFII NMIKLIWHYG ENSTTRP00000001120/1-509 LHMKRFVKDL GLSAVQSPSG LVGVYNGETL VYEESSWFII NMIKLIWHYG BACU006037/1-442 LHMKRFVKDL GLSAVQSPSG LVGVYNGETL VYEENSWFII NMIKLIWHYG bmy_21585T0/1-361 ---------- ---------- --GTFGGDDI TVD------- ------WEVG 151 200 ENSP00000387654/1-505 FQSLRMHMWV EDVLDKFMRI YRYQSHDYAF SSVEKLLHAL GGDDFLGMLN ENSBTAP00000042008/1-508 FQSLRMHMWV EDILDKFMRI YRYQSHDYAF SSVEKLLHSL GGDDYLGLFN ENSTTRP00000001120/1-509 FQSLRMHMWV EDILDKFMRI YRYQSHDYAF SSVEKLLHSL GGDDYLGLFN BACU006037/1-442 FQSLRMHMWV EDILDKFMRI YRYQSHDYAF SSVEKLLHSL GGDDYLGLFN bmy_21585T0/1-361 ---------- ---------I YRYQSHDYAF SSVEKLLHSL GGDDYLGLFN 201 250 ENSP00000387654/1-505 RTLLETLQKA GFSEKFLNEM IAPVMRVNYG QSTDINAFVG AVSLSCSDSG ENSBTAP00000042008/1-508 RSLLETLQKA GFSEKFLDEI ITPVMRVNYG QTTNINGFVG AVSMAGTDPG ENSTTRP00000001120/1-509 RSLLETLQKA GFSEKFLDEI ITPVMRVNYG QTMNINGFVG AVSMSCTDPG BACU006037/1-442 RSLLETLQKA GFSEKFLDEI ITPVMRINYG QTMNINGFV- ---------- bmy_21585T0/1-361 RSLLETLQKA GFSEKFLDEI ITPVMRINYG QTMNINGFVG AVSMSCTDPG 251 300 ENSP00000387654/1-505 LWAVEGGNKL VCSGLLQASK SNLISGSVMY IEEKTKTKYT GNPTKMYEVV ENSBTAP00000042008/1-508 LWAVKGGNKL VCSRLLQASR SNLVSGLVMS IEEKTRTKQT GNPSKVYEVV ENSTTRP00000001120/1-509 LWAVKGGNKL VCSRLLQASK SNLISGSVMS IEEKTRTKQT GNPTKVYEAV BACU006037/1-442 ---------- ---------- ---------- ---------- GNPTKVYEAV bmy_21585T0/1-361 LWAVKGGNKL VCSRLLQASK SNLISGSVMS IEEKTRTKQT GNPTKVYEAV 301 350 ENSP00000387654/1-505 YQIGTETRSD FYDIVLVATP LNRKMSNITF LNFDPPIEEF HQYYQHIVTT ENSBTAP00000042008/1-508 YQTGSETHSD FYDIVLVATP LNRKMSNINF LNFDPPIEEF HQHYEPLVTT ENSTTRP00000001120/1-509 YQTGSETHSA FYDIVLVATP LNRKMSNITF LNFDPPIEEF HQYYEPLVTT BACU006037/1-442 YQTGSETHSD FYDIVLVATP LNRKMSNITF LNFDPPIEEF HQYYEPLVTT bmy_21585T0/1-361 YQTGSETHSX FYDIVLVATP LNRKMSNITF LNFDPPIEEF HQYYEPLVTT 351 400 ENSP00000387654/1-505 LVKGELNTSI FSSRPIDKFG LNTVLTTDNS DLFINSIGIV PSVREKEDPE ENSBTAP00000042008/1-508 LIKGELNSTV FSSRALNEFH LGTVLTTDNP DLFINSIGLV SPVEEDNNPQ ENSTTRP00000001120/1-509 LIKGQLNSTV FTSRALDEFD LGTVLTTDNP DLFINSIGFV SSVEESNNPQ BACU006037/1-442 LIKGQLNSTV FTSRALDEFD LGTILTTDNP DLFINSIGFV SSVEENNNPQ bmy_21585T0/1-361 LIKGQLNSTV FTSRALDEFD LGTILTTDNP DLFINSIGFV SSVEENNNPQ 401 450 ENSP00000387654/1-505 PSTDGTYVWK IFSQETLTKA QILKLFLSYD YAVKKPWLAY PHYKPPEKCP ENSBTAP00000042008/1-508 PKADTAHVWK IFSAAALTKE QILKLFVSYD YAVKQSWLAY PHYTPPEKCP ENSTTRP00000001120/1-509 PKADRSHVWK IFSAGPLTKE QILKLFVSYD YAVKRSWLAY PHYTPPEKCP BACU006037/1-442 PKADRAHVWK IFSAGPLTKE QILKLFVSYD YAVKRSWLAY PHYTPPEKCP bmy_21585T0/1-361 PKADRAHVWK IFSAGPLTKE QILKLFVSYD YAVKRSWLAY PHYTPPEKCP 451 500 ENSP00000387654/1-505 SIILHDRLYY LNGIECAASA MEMSAIAAHN AALLAYHRWN GHTDMIDQDG ENSBTAP00000042008/1-508 SIILHDQLYY LNGIEFAASA MEMSAIAGYN AALLAYHRWN GNTHMIDQED ENSTTRP00000001120/1-509 SIILHDRLYY LNGMEVAASA MEVSAVAGYN AALLAYHRWN GHTHMIDQED BACU006037/1-442 SIILHDRLYY LNGMEVAASA MEMSAVAGYN AALLAYHRWN GHTHMIDQEE bmy_21585T0/1-361 SIILHDRLYY LNGMEVAASA MEMSAVAGYN AALLAYHRWN GHTHMIDQEE 501 550 ENSP00000387654/1-505 LYEKLKTEL ENSBTAP00000042008/1-508 LYERLKTEL ENSTTRP00000001120/1-509 LYEKLKTEL BACU006037/1-442 LYEKLKTEL bmy_21585T0/1-361 LYEKLKTEL