KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:45 2014 Check: 00 .. Name: ENSTTRP00000013998/1-386 Len: 576 Check: 2036 Weight: 1.00 Name: bmy_15169T0/1-463 Len: 576 Check: 2980 Weight: 1.00 Name: ENSP00000304429/1-451 Len: 576 Check: 6061 Weight: 1.00 Name: BACU002787/1-472 Len: 576 Check: 8820 Weight: 1.00 Name: ENSBTAP00000042058/1-451 Len: 576 Check: 5564 Weight: 1.00 // 1 50 ENSTTRP00000013998/1-386 ---------- ---------- ---------- ---------- ---------- bmy_15169T0/1-463 ---------- ---------- ---------- ---------- ---------- ENSP00000304429/1-451 MEGERRASQA PSSGLPAGGA NGESPGGGAP FPGSSGSSAL LQAEVLDLDE BACU002787/1-472 MEGECRAPQA RSSGLPAGGA GGESPGGDAP LSGSSGSSAL LQAEVLDLDE ENSBTAP00000042058/1-451 MEGECRASQA RSWGLPAGGA GGDSPGGDAP LPGSISSSSL LQAEVLDLDE 51 100 ENSTTRP00000013998/1-386 ---------- ----MDMNSF SPVMPTSPLS MINQVKFEDE PDLKDLFITV bmy_15169T0/1-463 ---------- ---------- -----MSKIT L--------- ---------- ENSP00000304429/1-451 DEDDLEVFSK DASLMDMNSF SPMMPTSPLS MINQIKFEDE PDLKDLFITV BACU002787/1-472 DEDDLEVFSK DASLMDMNSF SPMMPTSPLS MINQVKFEDE PDLKDLFITV ENSBTAP00000042058/1-451 DEDDLEVFSK DASLMDMNSF SPLMPTSPLS MINQVKFEDE PDLKDLFITV 101 150 ENSTTRP00000013998/1-386 DEPESHVTTI ETFITYRIIT KTSRGEFDSS EFEVRRRYQD FLWL-ERLEE bmy_15169T0/1-463 --GKCLLSYI ACAVIFSYFL QTSRGEFDSS EFEVRRRYQD FLWLKERLEE ENSP00000304429/1-451 DEPESHVTTI ETFITYRIIT KTSRGEFDSS EFEVRRRYQD FLWLKGKLEE BACU002787/1-472 DEPESHVTTI ETFITYRIIT KTSRGEFDSS EFEVRRRYQD FLWLKERLEE ENSBTAP00000042058/1-451 DEPESHVTTI ETFITYRIIT KTSRGEFDSS EFEVRRRYQD FLWLKEKLEE 151 200 ENSTTRP00000013998/1-386 AHPTLIIPXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_15169T0/1-463 AHPTLIIPPL PEKFIVKGMV ERFNDDFIET RRKALHKFLN RIADHPTLTF ENSP00000304429/1-451 AHPTLIIPPL PEKFIVKGMV ERFNDDFIET RRKALHKFLN RIADHPTLTF BACU002787/1-472 AHPTLIIPPL PEKFIVKGMV ERFNDDFIET RRKALHKFLN RIADHPTLTF ENSBTAP00000042058/1-451 AHPTLIIPPL PEKFIVKGMV ERFNDDFIET RRKALHKFLN RIADHPTLTF 201 250 ENSTTRP00000013998/1-386 XXXXXXXXXX XXXELSSHKK QGPGLLSRMG QTVRAVALSM RGVKSRPEEF bmy_15169T0/1-463 NEDFKVFLTA QAWELSSHKK QGPGLLSRMG QTVRAVALSM RGVKSRPEEF ENSP00000304429/1-451 NEDFKIFLTA QAWELSSHKK QGPGLLSRMG QTVRAVASSM RGVKNRPEEF BACU002787/1-472 NEDFKVFLTA QAWELSSHKK QGPGLLSRMG QTVRAVALSM RGVKSRPEEF ENSBTAP00000042058/1-451 NEDFKIFLTA QASEFSSHKK QGPGLLSRMG QSVRAVALSM RGVKSRPEEF 251 300 ENSTTRP00000013998/1-386 MEMNNFIEIF SQKINLIDKI SQRIYKEERE YFDEMKEYGP IHILWSASEE bmy_15169T0/1-463 MEMNNFIEIF SQKINLIDKI SQRIYKEERE YFDEMKEYGP IHILWSASEE ENSP00000304429/1-451 MEMNNFIELF SQKINLIDKI SQRIYKEERE YFDEMKEYGP IHILWSASEE BACU002787/1-472 MEMNNFIEIF SQKINLIDKI SQRIYKEERE YFDEMKEYGP IHILWSASEE ENSBTAP00000042058/1-451 MEMNNFIEIF SQKINLIDKI SQRIYKEERE YLDEMKEYGP IHILWSASEE 301 350 ENSTTRP00000013998/1-386 DLADTLKGVA SCIDRCCKAT EKRMSGLSEA LLPVVHEYVL YSEMLMGVMK bmy_15169T0/1-463 DLADTLKGVA SCIDKCCKAT EKRMSGLSEA LLP------- ------GVMK ENSP00000304429/1-451 DLVDTLKDVA SCIDRCCKAT EKRMSGLSEA LLPVVHEYVL YSEMLMGVMK BACU002787/1-472 DLADTLKGVA SCIDKCCKAT EKRMSGLSEA LLPVVHEYVL YSEMLMGVMK ENSBTAP00000042058/1-451 DLADTLKSVA SCIDKCCKAT EKRMSGFSEA LLPVVHEYVL YSEMLMAVMK 351 400 ENSTTRP00000013998/1-386 RRDQIQAELD SKVEALTSKK ADTD------ ---------- ---------- bmy_15169T0/1-463 RRDQIQAELD SKVEALTSKK ADTDLHSIND TRISSKNRLY IEYQASISDV ENSP00000304429/1-451 RRDQIQAELD SKVEVLTYKK ADTD------ ---------- ---------- BACU002787/1-472 RRDQIQAELD SKVEALTSKK ADTDLTLSIL YPRTGRNNAY FEETFFEDEL ENSBTAP00000042058/1-451 RRDQIQAELD SKVEALTSKK ADTD------ ---------- ---------- 401 450 ENSTTRP00000013998/1-386 ---------- ---------- ---------- L--------- ---------- bmy_15169T0/1-463 STNLNTKLLV LTVTQKISQE MFAELVSVKI LIYHRPSQQE NAGHILHIPL ENSP00000304429/1-451 ---------- ---------- ---------- L--------- ---------- BACU002787/1-472 MF-------- ---------- INLELVPVKI L--------- ---------- ENSBTAP00000042058/1-451 ---------- ---------- ---------- L--------- ---------- 451 500 ENSTTRP00000013998/1-386 ---------- ---------- ---------- ---------- ---------- bmy_15169T0/1-463 TRIRKAHAHM PDVVITVTCR NANTILDNAR DKENKDNQKA IQQEYNKLLK ENSP00000304429/1-451 ---------- ---------- ---------- ---------- ---------- BACU002787/1-472 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042058/1-451 ---------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000013998/1-386 LTEEIGKLED KVECANNALK ADWERWKQNM QNDIKSAFTD MAEENIHSYE bmy_15169T0/1-463 LTEEIGKLED KVECANNALK ADWERWKQNM QNDIKSAFTD MAEENIHYYE ENSP00000304429/1-451 LPEEIGKLED KVECANNALK ADWERWKQNM QNDIKLAFTD MAEENIHYYE BACU002787/1-472 LTEEIGKLED KVECANNALK ADWERWKQNM QNDIKSAFTD MAEENIHYYE ENSBTAP00000042058/1-451 LTEEIGKLED KVECANNALK ADWERWKQNM QNDIKSAFTN MAEENILYYE 551 600 ENSTTRP00000013998/1-386 QCLATWESFL TSQTDLHLEE ASEDKS bmy_15169T0/1-463 QGLQNEER-- -TKEKMFTAI PLNSK- ENSP00000304429/1-451 QCLATWESFL TSQTNLHLEE ASEDKP BACU002787/1-472 Q----WNR-- ---STLTL-- ------ ENSBTAP00000042058/1-451 QCLATWESFL TSQTDLHLEE ASEDKL