KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:46 2014 Check: 00 .. Name: BACU014124/1-1077 Len: 1077 Check: 9139 Weight: 1.00 Name: ENSP00000393667/1-530 Len: 1077 Check: 5142 Weight: 1.00 Name: ENSBTAP00000042066/1-530 Len: 1077 Check: 5706 Weight: 1.00 Name: bmy_20062T0/1-340 Len: 1077 Check: 8981 Weight: 1.00 Name: ENSTTRP00000007338/1-530 Len: 1077 Check: 5913 Weight: 1.00 // 1 50 BACU014124/1-1077 MLGSERGVVE EWLSEFKALP DTQITNYAAT LHRKKTLVPA LYKVIQDSNN ENSP00000393667/1-530 MLGTDRCVVE EWLSEFKALP DTQITSYAAT LHRKKTLVPA LYKVIQDSNN ENSBTAP00000042066/1-530 MLGSERGVVE EWLSEFKALP DTQITNYAAT LHRKKTLVPA LYKVIQDSNN bmy_20062T0/1-340 ---------- ---------- ---------- -HR------- ---------- ENSTTRP00000007338/1-530 MLGSERGVVE EWLSEFKALP DTQITNYAAT LHRKKTLVPA LYKVIQDSNN 51 100 BACU014124/1-1077 ELLEPVCHQL FELYRSSEVR LKRFTLQFLP ELMWVYLRLT VSRDRQSNGC ENSP00000393667/1-530 ELLEPVCHQL FELYRSSEVR LKRFTLQFLP ELMWVYLRLT VSRDRQSNGC ENSBTAP00000042066/1-530 ELLEPVCHQL FELYRSSEVR LKRFTLQFLP ELMWVYLRLT VSRDRQSNGC bmy_20062T0/1-340 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007338/1-530 ELLEPVCHQL FELYRSSEVR LKRFTLQFLP ELMWVYLRLT VSRDRQSNGC 101 150 BACU014124/1-1077 IEALLLGIYN LEIADKDGNN KVLSFTIPSL SKPSIYHEPS TIGSMALTEG ENSP00000393667/1-530 IEALLLGIYN LEIADKDGNN KVLSFTIPSL SKPSIYHEPS TIGSMALTEG ENSBTAP00000042066/1-530 IEALLLGIYN LEIADKDGNN KVLSFTIPSL SKPSIYHEPS TIGSMALTEG bmy_20062T0/1-340 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007338/1-530 IEALLLGIYN LEIADKDGNN KVLSFTIPSL SKPSIYHEPS TIGSMALTEG 151 200 BACU014124/1-1077 ALCQHDLIRV VYSDLHPQRE TFTAQNRFEV LSFLMLCYNS AIVYMPASSY ENSP00000393667/1-530 ALCQHDLIRV VYSDLHPQRE TFTAQNRFEV LSFLMLCYNS AIVYMPASSY ENSBTAP00000042066/1-530 ALCQHDLIRV VYSDLHPQRE TFTAQNRFEV LSFLMLCYNS AIVYMPASSY bmy_20062T0/1-340 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007338/1-530 ALCQHDLIRV VYSDLHPQRE TFTAQNRFEV LSFLMLCYNS AIVYMPASSY 201 250 BACU014124/1-1077 QSLCRMGSRV CVSGFPRQHE KHWKELCGRI VLDPEFMVQL LTGVYYAMYN ENSP00000393667/1-530 QSLCRMGSRV CVSGFPRQHE KHWKELCGRI VLDPEFMVQL LTGVYYAMYN ENSBTAP00000042066/1-530 QSLCRMGSRV CVSGFPRQHE KQWKELCGRI VLDPEFMVQL LTGVYYAMYN bmy_20062T0/1-340 ---------- ---------- ---------- ---------- --------YN ENSTTRP00000007338/1-530 QSLCRMGSRV CVSGFPRQHE KHWKELCGRI VLDPEFMVQL LTGVYYAMYN 251 300 BACU014124/1-1077 GQWDLGQEVL DDIIYRAQLE LFSQPLLVAN AMKNSLPFDA PDSSQEGQKV ENSP00000393667/1-530 GQWDLGQEVL DDIIYRAQLE LFSQPLLVAN AMKNSLPFDA PDSTQEGQKV ENSBTAP00000042066/1-530 GQWDLGQEVL DDIIYRAQLE LFSQPLLVAN AMKNSLPFDA PDSSQEGQKV bmy_20062T0/1-340 GQWDLGQEVL DDIIYRAQLE LFSQPLLVAN AMKNSLPFDA PDSSQEGQKV ENSTTRP00000007338/1-530 GQWDLGQEVL DDIIYRAQLE LFSQPLLVAN AMKNSLPFDA PDSSQEGQKV 301 350 BACU014124/1-1077 LKVEVTPTVP RISRTAITTA SIRRHRWRRE DGFDFSNEAD SSIPGSPIQH ENSP00000393667/1-530 LKVEVTPTVP RISRTAITTA SIRRHRWRR- ---------- ---------- ENSBTAP00000042066/1-530 LKVEVTPTVP RISRSAITTA SIRRHRWRR- ---------- ---------- bmy_20062T0/1-340 LKVEVTPTVP RISRTAITTA SIRRHRWRRE DGFDFSNEAD SSIPGSPIQH ENSTTRP00000007338/1-530 LKVEVTPTVP RISRTAITTA SIRRHRWRR- ---------- ---------- 351 400 BACU014124/1-1077 GSTDLGIKRV QEGEVLVRRT PEHGSPEPNS AAATTEGAEG VNGGEESVNL ENSP00000393667/1-530 ---------- ---------- ---------- -----EGAEG VNGGEESVNL ENSBTAP00000042066/1-530 ---------- ---------- ---------- -----EGAEG INGGEESVNL bmy_20062T0/1-340 GSTDLGIKRV QEGEVLVHRT PEHGSPEPNS AAATTEGAEG VNGGEESVNL ENSTTRP00000007338/1-530 ---------- ---------- ---------- -----EGAEG VNGGEESVNL 401 450 BACU014124/1-1077 NDADEGFSSG ASLSNQPVGT KPSSSSQRGN LRKVATGRSA KDKETTSAIK ENSP00000393667/1-530 NDADEGFSSG ASLSSQPIGT KPSSSSQRGS LRKVATGRSA KDKETASAIK ENSBTAP00000042066/1-530 NDADEGFSSG ASLSSQPIGI KPSSSSQRGS LRKVATGRSA KDKETTSAIK bmy_20062T0/1-340 NDADEGFSSG ASLSNQPVGT KPSSSSQRGN LRKVATGRSA KDKETTSAIK ENSTTRP00000007338/1-530 NDADEGFSSG ASLSSQPIGT KPSSSSQRGN LRKVATGRSA KDKETTSAIK 451 500 BACU014124/1-1077 SSESPRDSVV RRQYVQQPSD LSVDSIELTP MKKHLSLPAG QVVPKTNSIS ENSP00000393667/1-530 SSESPRDSVV RKQYVQQPTD LSVDSVELTP MKKHLSLPAG QVVPKINSLS ENSBTAP00000042066/1-530 SNESPRDSVV RRQYVQQPTD LSVDSIELTP MKKHLSLPAG QVVPKTNSIN bmy_20062T0/1-340 SSESPRDSVV RRQYVQQPSD LSVDSIELTP MKKHLSLPAG QVVPKTNSIS ENSTTRP00000007338/1-530 SSESPRDSVV RRQYVQQPAD LSVDSIELTP MKKHLSLPAG QVVPKTNSIS 501 550 BACU014124/1-1077 LIRTASASSS KSFDYVNGSQ ASTSIGVGTE GVTNLAANNG NRYSTVSLQE ENSP00000393667/1-530 LIRTASASSS KSFDYVNGSQ ASTSIGVGTE GGTNLAANNA NRYSTVSLQE ENSBTAP00000042066/1-530 LIRTASASSS KSFDYVNGSQ ASTSIGVGTE GITNLAANNA NRYSTVSLQE bmy_20062T0/1-340 LIRTASASSS KSFDYVNGSQ ASTSIGVGTE GVTNLAANNA NRYSTVSLQE ENSTTRP00000007338/1-530 LIRTASASSS KSFDYVNGSQ ASTSIGVGTE GVTNLAANNA NRYSTVSLQE 551 600 BACU014124/1-1077 DRLGQAGEGS TVRAETVLSS LKSVTLAMMS KLESKEDKML EVQFVGDDDV ENSP00000393667/1-530 DRLGQAGEG- ---------- ---------- ---------- ---------- ENSBTAP00000042066/1-530 DRLGQATEG- ---------- ---------- ---------- ---------- bmy_20062T0/1-340 DRLGQAGEG- ---------- ---------- ---------- ---------- ENSTTRP00000007338/1-530 DRLGQAGEG- ---------- ---------- ---------- ---------- 601 650 BACU014124/1-1077 LNHILDREGG AKIKKERAQL LVNTKKIIKK PEYDLEEDDQ EVLKDQNYVE ENSP00000393667/1-530 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042066/1-530 ---------- ---------- ---------- ---------- ---------- bmy_20062T0/1-340 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007338/1-530 ---------- ---------- ---------- ---------- ---------- 651 700 BACU014124/1-1077 VLGRHVQESL KNGSATDGGN KVYSFQNRKH PEKMAKLASE LAKTPRKSVS ENSP00000393667/1-530 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042066/1-530 ---------- ---------- ---------- ---------- ---------- bmy_20062T0/1-340 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007338/1-530 ---------- ---------- ---------- ---------- ---------- 701 750 BACU014124/1-1077 SNLKSDPEIT IDIPQCSKGH SASDKVQLKN NDKSEFLSTA PRGLRKRLIV ENSP00000393667/1-530 ---------- ---------- ---------- ---------- -----KELLS ENSBTAP00000042066/1-530 ---------- ---------- ---------- ---------- -----KELLS bmy_20062T0/1-340 ---------- ---------- ---------- ---------- -----KELLS ENSTTRP00000007338/1-530 ---------- ---------- ---------- ---------- -----KELLS 751 800 BACU014124/1-1077 PRSHSDSESE YSASNSEDDE GVAQEYEEDT NEVILSEQIQ AQNRVVSAPV ENSP00000393667/1-530 PGA------- ---------- ---------- ---------- --------PL ENSBTAP00000042066/1-530 PGA------- ---------- ---------- ---------- --------PL bmy_20062T0/1-340 PGA------- ---------- ---------- ---------- --------PL ENSTTRP00000007338/1-530 PGA------- ---------- ---------- ---------- --------PL 801 850 BACU014124/1-1077 CKETPSKKMK RDKTSDLVEE YFEAHSSSKV LTSDRTLQKL KRAKLDQQTL ENSP00000393667/1-530 TKQSR----- ---------- ---------- ---------- ---------- ENSBTAP00000042066/1-530 TKQSR----- ---------- ---------- ---------- ---------- bmy_20062T0/1-340 TKQSR----- ---------- ---------- ---------- ---------- ENSTTRP00000007338/1-530 TKQSR----- ---------- ---------- ---------- ---------- 851 900 BACU014124/1-1077 HNLLSKVSPS FSAEFKQLNQ QYEQLFHKWM LQLHLGFNIV LYGLGSKRDL ENSP00000393667/1-530 -------SPS F--------- ---------- ---------- ---------- ENSBTAP00000042066/1-530 -------SPS F--------- ---------- ---------- ---------- bmy_20062T0/1-340 -------SPS F--------- ---------- ---------- ---------- ENSTTRP00000007338/1-530 -------SPS F--------- ---------- ---------- ---------- 901 950 BACU014124/1-1077 LERFRTTMLQ DCIHVVINGF FPGISVKSIL NSITEEVLNH MGTFRSVVDQ ENSP00000393667/1-530 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042066/1-530 ---------- ---------- ---------- ---------- ---------- bmy_20062T0/1-340 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007338/1-530 ---------- ---------- ---------- ---------- ---------- 951 1000 BACU014124/1-1077 LDWIINKFKE ESSLELFLLI HNLDSQMLRG DKSQQIIGQL SSLRNIYLIA ENSP00000393667/1-530 ---------- ---------- ---------- ---------- ----NMQLIS ENSBTAP00000042066/1-530 ---------- ---------- ---------- ---------- ----NMQLIS bmy_20062T0/1-340 ---------- ---------- ---------- ---------- ----NMQLIS ENSTTRP00000007338/1-530 ---------- ---------- ---------- ---------- ----NMQLIS 1001 1050 BACU014124/1-1077 SIDHLNAPLR LSFQDFYQQC REAFLVNSDL TLRAQLTEFR DHKLIRTKKG ENSP00000393667/1-530 QV-------- ---------- ---------- ---------- ---------- ENSBTAP00000042066/1-530 QV-------- ---------- ---------- ---------- ---------- bmy_20062T0/1-340 QV-------- ---------- ---------- ---------- ---------- ENSTTRP00000007338/1-530 QV-------- ---------- ---------- ---------- ---------- 1051 1100 BACU014124/1-1077 TDGVEYLLIP VDNGTLTDFL EKEEEEF ENSP00000393667/1-530 ---------- ---------- ------- ENSBTAP00000042066/1-530 ---------- ---------- ------- bmy_20062T0/1-340 ---------- ---------- ------- ENSTTRP00000007338/1-530 ---------- ---------- -------