KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:46 2014 Check: 00 .. Name: ENSP00000379245/1-403 Len: 436 Check: 1518 Weight: 1.00 Name: BACU011305/1-357 Len: 436 Check: 6020 Weight: 1.00 Name: ENSBTAP00000042073/1-402 Len: 436 Check: 671 Weight: 1.00 Name: bmy_00246T0/1-434 Len: 436 Check: 564 Weight: 1.00 Name: ENSTTRP00000014097/1-403 Len: 436 Check: 3427 Weight: 1.00 // 1 50 ENSP00000379245/1-403 ---------- ---------M DRSKENCISG PVKATAPVG- GPKRVLVTQQ BACU011305/1-357 ---------- ---------- ---------- ---TTVPLGD GPKRVPVTQQ ENSBTAP00000042073/1-402 ---------- ---------M DRCKENCISG P-KTAVPLSD GPKRVPVAQQ bmy_00246T0/1-434 MFHSVIVLPE KESALHWSIM DKCKENSISG P-KTTVPLGD GPKRVPVTQQ ENSTTRP00000014097/1-403 ---------- ---------M DKCKENSISG PXXTTVPLGD GPKRVPVTQQ 51 100 ENSP00000379245/1-403 FPCQNPLPVN SGQAQRVLCP SNSSQRIPLQ AQKLVSSHKP VQNQKQKQLQ BACU011305/1-357 FPSQNPVSAN SGQAQRVLCP SNSSQRLPSQ VQKLVSSQKP VQPLKQKPAQ ENSBTAP00000042073/1-402 FPSQNPVSVN SGQAQRVLCP TNSSQRVPSQ AQKLVSIQKP VQTLKQKPPQ bmy_00246T0/1-434 FPSQNPVSAN SGQAQRVLCP SNSSQRVPSQ VPKLVSSQKP VPTLKQKPAW ENSTTRP00000014097/1-403 FPSQNPVSAN SGQAQRVLCP SNSSQRVPSQ VQKLVSSQKS VQPLKQKPTQ 101 150 ENSP00000379245/1-403 ATSVPHPVSR PLNNTQKSKQ PLPSAP---- -ENNPEEELA S--------K BACU011305/1-357 AASAPRAVSR PLSNTQKSEQ PQLPAP---- -GNNPEKEAA S--------K ENSBTAP00000042073/1-402 AASAPRPVTR PPSNTQKSKQ PQPPAP---- -GNNPEKEVA S--------K bmy_00246T0/1-434 AASAPRPVSR PLSNTQSSEQ PQLPAPDLTE LGNKPDVGMV VILVALTEIV ENSTTRP00000014097/1-403 AASAPRSVSR PLSNTQKSEQ PQLPAP---- -GNNPEKEAA S--------K 151 200 ENSP00000379245/1-403 QKNEESKKRQ WALEDFEIGR PLGKGKFGNV YLAREKQSKF ILALKVLFKA BACU011305/1-357 QKNEESKRRQ WALEDFEIGR PLGKGKFGNV YLAREKQSKF ILALKVLFKA ENSBTAP00000042073/1-402 QKNEESKKRQ WALEDFEIGR PLGKGKFGNV YLAREKQSKF ILALKVLFKA bmy_00246T0/1-434 NQGGEESRRQ WALEXFEIGR PLGKGKFGNV YLAREKQSKF ILALKVLFKA ENSTTRP00000014097/1-403 QKNEESKRRQ WALEDFEIGR PLGKGKFGNV YLAREKQSKF ILALKVLFKA 201 250 ENSP00000379245/1-403 QLEKAGVEHQ LRREVEIQSH LRHPNILRLY GYFHDATRVY LILEYAPLGT BACU011305/1-357 QLEKAGVEHQ LRREVEIQSH LRHPNILRLY GYFHDATRVY LILEYAPLGA ENSBTAP00000042073/1-402 QLEKAGVEHQ LRREVEIQSH LRHPNILRLY GYFHDATRVY LILEYAPLGA bmy_00246T0/1-434 QLEKAGVEHQ LRREVEIQSH LRHPNILRLY GYFHDATRVY LILEYAPLGA ENSTTRP00000014097/1-403 QLEKAGVEHQ LRREVEIQSH LRHPNILRLY GYFHDATRVY LILEYAPLGA 251 300 ENSP00000379245/1-403 VYRELQKLSK FDEQRTATYI TELANALSYC HSKRVIHRDI KPENLLLGSA BACU011305/1-357 VYRELQKLSK FDEQRTATYI TELANALSYC HSKRVIHRDI KPENLLLGSS ENSBTAP00000042073/1-402 VYRELQKLSK FDEQRTATYI TELANALSYC HSKRVIHRDI KPENLLLGSA bmy_00246T0/1-434 VYRELQKLSK FDEQRTATYI TELANALSYC HSKRVIHRDI KPENLLLGSS ENSTTRP00000014097/1-403 VYRELQKLSK FDEQRTATYI TELANALSYC HSKRVIHRDI KPENLLLGSS 301 350 ENSP00000379245/1-403 GELKIADFGW SVHAPSSRRT TLCGTLDYLP PEMIEGRMHD EKVDLWSLGV BACU011305/1-357 GELKIADFGW SVHAPSSRRT TLCGTLDYLP PEMIEGRMHD EKVDLWSLGV ENSBTAP00000042073/1-402 GELKIADFGW SVHAPSSRRT TLCGTLDYLP PEMIEGRMHD EKVDLWSLGV bmy_00246T0/1-434 GELKIADFGW SVHAPSSRRT TLCGTLDYLP PEMIEGRMHD EKVDLWSLGV ENSTTRP00000014097/1-403 GELKIADFGW SVHAPSSRRT TLCGTLDYLP PEMIEGRMHD EKVDLWSLGV 351 400 ENSP00000379245/1-403 LCYEFLVGKP PFEANTYQET YKRISRVEFT FPDFVTEGAR DLISRLLKHN BACU011305/1-357 LCYEFLVGKP PFEANTYQET YKRISR---- ---------- -LLCSVLTTG ENSBTAP00000042073/1-402 LCYEFLVGKP PFEADTYQET YRRISRVEFT FPDCVPEGAR DLISRLLKHN bmy_00246T0/1-434 LCYEFLVGKP PFEANTYQET YKRISRVEFT FPDFVPEGAR DLISRLLKHN ENSTTRP00000014097/1-403 LCYEFLVGKP PFEANTYQET YKRISRVEFT FPDFVPEGAR DLISRLLKHN 401 450 ENSP00000379245/1-403 PSQRPMLREV LEHPWITANS SKPSNCQNKE SASKQS BACU011305/1-357 H--------- ----W----- SGVELGLTRE RYGYLV ENSBTAP00000042073/1-402 PSQRPTLKEV LEHPWIIAN- SKPSSCQKKE STSKQS bmy_00246T0/1-434 PSQRPTLKEV LEHPWITAN- AKPSSSQKKE SASKQS ENSTTRP00000014097/1-403 PSQRPTLKEV LEHPWITAN- SKPSSSQKKE SASKQS