KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:52:47 2014 Check: 00 .. Name: ENSBTAP00000042074/1-577 Len: 613 Check: 8777 Weight: 1.00 Name: ENSP00000234296/1-577 Len: 613 Check: 2891 Weight: 1.00 Name: bmy_20061T0/1-596 Len: 613 Check: 1043 Weight: 1.00 Name: ENSTTRP00000011183/1-496 Len: 613 Check: 2682 Weight: 1.00 // 1 50 ENSBTAP00000042074/1-577 MTSTLELKAD KMLKVQFVGD DDVLNHILDR EGGPKIKKER AQLLVNTQKI ENSP00000234296/1-577 -MSKPELKED KMLEVHFVGD DDVLNHILDR EGGAKLKKER AQLLVNPKKI bmy_20061T0/1-596 MMSKLESKED KMLEVQFVGD DDVLNHILDR EGGAKIKKER AQLLVNTKKI ENSTTRP00000011183/1-496 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000042074/1-577 IKKPENELEE DDQEVLKDHN YVEVLGQDVQ ESLKNGSATD GGNKVYPFQN ENSP00000234296/1-577 IKKPEYDLEE DDQEVLKDQN YVEIMGRDVQ ESLKNGSATG GGNKVYSFQN bmy_20061T0/1-596 IKKPEYDLEE DDQEVLKDQN YVEVLGRHVQ ESLKNGSATD GGNKVYSFQN ENSTTRP00000011183/1-496 ---------- ---------- ---------- -SLKNGSATD GGNKVYSFQN 101 150 ENSBTAP00000042074/1-577 RKHPEKMAKL ASELAKTPRK SVSLNMKNDP KITIDIPQCS KGHSSSDKSQ ENSP00000234296/1-577 RKHSEKMAKL ASELAKTPQK SVSFSLKNDP EITINVPQSS KGHSASDKVQ bmy_20061T0/1-596 RKHPEKMAKL ASELAKTPRK SVSSNLKSDP EITTDIPQCS KGHSASDKVQ ENSTTRP00000011183/1-496 RKHPEKMAKL ASELAKTPRK SVSSNLKSDP EITIDIPQCS KGHSASDKVQ 151 200 ENSBTAP00000042074/1-577 LKNNDKSEFL STAPRGLRKR LIVPRSHSDS ESEYSASNSE DDEGVAQEYE ENSP00000234296/1-577 PKNNDKSEFL STAPRSLRKR LIVPRSHSDS ESEYSASNSE DDEGVAQEHE bmy_20061T0/1-596 LKNNDKSEFL STAPRGLRKR LI-------- ---------G DDEGVAQEYE ENSTTRP00000011183/1-496 LKNNDKSEFL STAPRGLRKR LIVPRFHSDS ESEYSASNSE DDEGVAQECE 201 250 ENSBTAP00000042074/1-577 EDTNEDILSQ KIQAQNREVS APVFRETPSK KMKREKTSHL VEKYFEAHSS ENSP00000234296/1-577 EDTNAVIFSQ KIQAQNRVVS APVGKETPSK RMKRDKTSDL VEEYFEAHSS bmy_20061T0/1-596 EDTNEVILSE QIQAQNRVVS APVCKETPSK KMKRDKTSDL VEEYFEAHSS ENSTTRP00000011183/1-496 ENTNEVILSE QIQAQNRVVS APVCKETPSK KMRRDKTSDL VE-YFEAHSS 251 300 ENSBTAP00000042074/1-577 SKVLTSDRTL QKLKRAKLDQ QTLHNLLSKV SPSFSAELKQ LNQQHEQLFH ENSP00000234296/1-577 SKVLTSDRTL QKLKRAKLDQ QTLRNLLSKV SPSFSAELKQ LNQQYEKLFH bmy_20061T0/1-596 SKVLTSDRTL QKLKRAKLDQ QTLHNLLSKV SPSFSAELKQ LNQQYEQLFH ENSTTRP00000011183/1-496 SKVLTSXXXX XXXXXXXXXX QTLHNLLSKV SPSFSAELKQ LNQQYEQLFH 301 350 ENSBTAP00000042074/1-577 KWMLQLHLGF NIVLYGLGSK RDLLERFRTT MLQDCIHIVI NGFFPGISVK ENSP00000234296/1-577 KWMLQLHLGF NIVLYGLGSK RDLLERFRTT MLQDSIHVVI NGFFPGISVK bmy_20061T0/1-596 KWMLQLHLGF NIVLYGLGSK RDLLERFRTT MLQDCIHVVI NGFFPGISVK ENSTTRP00000011183/1-496 KWMLQLHLGF NIVLYGLGSK RDLLERFRTT MLQDCIHVVI NGFFPGISVK 351 400 ENSBTAP00000042074/1-577 SVLNSVT-EV LDHVGTFRSV LDQLEWITNK FKEDSSLELF LLIHNLDSQM ENSP00000234296/1-577 SVLNSITEEV LDHMGTFRSI LDQLDWIVNK FKEDSSLELF LLIHNLDSQM bmy_20061T0/1-596 SILNSITEEV LNHMGTFRSV VDQLDWIINK FKEESSLELF LLIHNLDSQM ENSTTRP00000011183/1-496 SILNSITEEV LNHMGTFRSV LDQLDWIINK FKEESSLELF LLIHNLDSQM 401 450 ENSBTAP00000042074/1-577 LRGDKSQQII GQLSSLRNIY LIASIDHLNA PLMWDHAKQS LYNWLWYETT ENSP00000234296/1-577 LRGEKSQQII GQLSSLHNIY LIASIDHLNA PLMWDHAKQS LFNWLWYETT bmy_20061T0/1-596 LRGDKSQQII GQLSSLRNIY LIASIDHLNA PLMWDHAKQS LYNWLWYETT ENSTTRP00000011183/1-496 LRGDKSQQII GQLSSLRNIY LIASIDHLNA PLMWDHAKQS LYNWLWYETT 451 500 ENSBTAP00000042074/1-577 TYSHYTEETS YENSLLVKQS GSLPLSSLIH VLRSLTPNAR GIFR----LL ENSP00000234296/1-577 TYSPYTEETS YENSLLVKQS GSLPLSSLTH VLRSLTPNAR GIFR----LL bmy_20061T0/1-596 TYSHYTEETS YENSLLVKQS GSLPLSSLTH VLRSLTPNAS SLFKKKSTLF ENSTTRP00000011183/1-496 TYSHYTEETS YENSLLVKQS GSLPLSSLTH VLRSLTPNAR GIFR----LL 501 550 ENSBTAP00000042074/1-577 IKYQ------ ---------- ---------- -LDNQDNPSY T----GLCFQ ENSP00000234296/1-577 IKYQ------ ---------- ---------- -LDNQDNPSY I----GLSFQ bmy_20061T0/1-596 TLFKTAHGIM SYLATHFSVF FGMGIHIWGH VLNTDLCSHY LLNSPGLSFQ ENSTTRP00000011183/1-496 IKYQ------ ---------- ---------- -LDNQDNPYY I----GLSFQ 551 600 ENSBTAP00000042074/1-577 DFYQQCREAF LVNSDLTLRA QLTEFRDHKL IRTKKGTDGV EYLLIPVDNG ENSP00000234296/1-577 DFYQQCREAF LVNSDLTLRA QLTEFRDHKL IRTKKGTDGV EYLLIPVDNG bmy_20061T0/1-596 DFYQQCREAF LVNSDLTLRA QLTEFRDHKL IRAKKGTDGV EYLLIPVDNG ENSTTRP00000011183/1-496 DFYQQCREAF LVNSDLTLRA QLTEFRDHKL IRTKKGTDGV EYLLIPVDNG 601 650 ENSBTAP00000042074/1-577 ILTDFLENEE EEL ENSP00000234296/1-577 TLTDFLEKEE EEA bmy_20061T0/1-596 TLTDFLEKEE EEF ENSTTRP00000011183/1-496 TLADFLEKEE EEF