KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:09 2014 Check: 00 .. Name: ENSP00000263181/1-898 Len: 898 Check: 8370 Weight: 1.00 Name: ENSBTAP00000042140/1-893 Len: 898 Check: 6456 Weight: 1.00 Name: ENSTTRP00000009813/1-891 Len: 898 Check: 673 Weight: 1.00 Name: BACU008860/1-637 Len: 898 Check: 7958 Weight: 1.00 Name: bmy_13431T0/1-616 Len: 898 Check: 1186 Weight: 1.00 // 1 50 ENSP00000263181/1-898 MSVTEEDLCH HMKVVVRVRP ENTKEKAAGF HKVVHVVDKH ILVFDPKQEE ENSBTAP00000042140/1-893 MSVTEEDLCH HMKVVVRVRP ENTKEKASGF HKVVHVVDKH ILVFDPKQEE ENSTTRP00000009813/1-891 MSVTEEDLCH HMKVVVRVRP ENTKEKTSGF HKVVHVVDKH ILVFDPKQEE BACU008860/1-637 ---------- ---------- ---------- ---------- ---------- bmy_13431T0/1-616 MSVTEEDLCH HMKVVVRVRP ENTKEKASGF HKVVHVVDKH ILVFDPKQEE 51 100 ENSP00000263181/1-898 VSFFHGKKTT NQNVIKKQNK DLKFVFDAVF DETSTQSEVF EHTTKPILRS ENSBTAP00000042140/1-893 ISFFHGKKTM NRDITKRQNK DLKFVFDAVF DETSTQLEVF EHTTKPILRS ENSTTRP00000009813/1-891 ISFFHGKKTI NRDITKRQNK DLKFVFDAVF DETSTQLEVF EHTTKPILRS BACU008860/1-637 ---------- ---------- ---------- ---------- ---------- bmy_13431T0/1-616 ISFFHGKKTV NRDITKRQNK DLKFVFDAVF DETSTQLEVF EHTTKPILRS 101 150 ENSP00000263181/1-898 FLNGYNCTVL AYGATGAGKT HTMLGSADEP GVMYLTMLHL YKCMDEIKEE ENSBTAP00000042140/1-893 FLNGYNCTVL AYGATGAGKT HTMLGSAAEP GVMYLTMLDL YKSMDEIKEE ENSTTRP00000009813/1-891 FLNGYNCTVL AYGATGAGKT HTMLGSAAEP GVMYQTMLDL YKSMDEIKEE BACU008860/1-637 ---------- ---------- ---------- --MYQTMLDL YKSMDEIKEE bmy_13431T0/1-616 FLNGYNCTVL AYGATGAGKT HTMLGSAAEP GVMYQTMLDL YKSMDEIKEE 151 200 ENSP00000263181/1-898 KICSTAVSYL EVYNEQIRDL LVNSGPLAVR EDTQKGVVVH GLTLHQPKSS ENSBTAP00000042140/1-893 KVCSTAVSYL EVYNEQIRDL LVNSGPLAVR EDAQKGVVVQ GLTLHQPKSS ENSTTRP00000009813/1-891 KVCSTAVSYL EVYNEQIRDL LVNSGPLAVR EDAQKGVVVQ GLTLHQPKSS BACU008860/1-637 KVCSTAVSYL EVYNEQIRDL LVNSGPLAVR EDAQKGVVVQ GLTLHQPKSS bmy_13431T0/1-616 KVCSTAVSYL EVYNEQIRDL LVNSGPLAVR EDAQKGVVVQ GLTLHQPKSS 201 250 ENSP00000263181/1-898 EEILHLLDNG NKNRTQHPTD MNATSSRSHA VFQIYLRQQD KTASINQNVR ENSBTAP00000042140/1-893 EEILQLLDNG NRNRTQHPTD MNATSSRSHA VFQIYLRQQD KTASINQNVR ENSTTRP00000009813/1-891 EEILQLLDNG NKNRTQHPTD MNATSSRSHA VFQIYLRQQD KTASINQNVR BACU008860/1-637 EEILQLLDNG NKNRTQHPTD MNATSSRSHA VFQIYLRQQD KTASINQNVR bmy_13431T0/1-616 EEILQLLDNG NKNRTQHPTD MNATSSRSHA VFQIYLRQQD KTASINQNVR 251 300 ENSP00000263181/1-898 IAKMSLIDLA GSERASTSGA KGTRFVEGTN INRSLLALGN VINALADSKR ENSBTAP00000042140/1-893 IAKMTLIDLA GSERASATSA KGTRFIEGTN INRSLLALGN VINALADTKK ENSTTRP00000009813/1-891 IAKMSLIDLA GSERASSTSA KGTRFIEGTN INRSLLALGN VINALADTKR BACU008860/1-637 IAKMSLIDLA GSERASSTSA KGTRFIEGTN INRSLLALGN VINALADTKR bmy_13431T0/1-616 IAKMSLIDLA GSERASSTSA KGTRFIEGTN INRSLLALGN VINALADTKR 301 350 ENSP00000263181/1-898 KNQHIPYRNS KLTRLLKDSL GGNCQTIMIA AVSPSSVFYD DTYNTLKYAN ENSBTAP00000042140/1-893 KNQHIPYRNS KLTRLLKDSL GGNCQTIMIA AVSPSSVFYD DTYNTLKYAN ENSTTRP00000009813/1-891 KNQHIPYRNS KLTRLLKDSL GGNCQTIMIA AVSPSSVFYD DTYNTLKYAN BACU008860/1-637 KNQHIPYRNS KLTRLLKDSL GGNCQTIMIA AVSPSSVFYD DTYNTLKYAN bmy_13431T0/1-616 KNQHIPYRNS KLTRLLKDSL GGNCQTIMIA AVSPSSVFYD DTYNTLKYAN 351 400 ENSP00000263181/1-898 RAKDIKSSLK SNVLNVNNHI TQYVKICNEQ KAEILLLKEK LKAYEEQKAF ENSBTAP00000042140/1-893 RAKDIKSSLK SNVLNLDNHI TQYVKICNEQ KKEILMLKEK LKAYEEQKAF ENSTTRP00000009813/1-891 RAKDIKSSLK SNVLNLDNHI TQYVKICNEQ KEEILMLKEK LKAYEEQKAF BACU008860/1-637 RAKDIKSSLK SNVLNLDNHI TQYVKICNEQ KEEILMLKEK LKAYEEQKAF bmy_13431T0/1-616 RAKDIKSSLK SNVLNLDNHI TQYVKICNEQ KEEILMLKEK LKAYEEQKAF 401 450 ENSP00000263181/1-898 TNENDQAKLM ISNPQEKEIE RFQEILNCLF QNREEIRQEY LKLEMLLKEN ENSBTAP00000042140/1-893 TDESS--KVM ISNPQKKEIE RFQEILNCLF QNREEIRQEY LKLEMLLKEN ENSTTRP00000009813/1-891 TDENN--KVM ISNPQEKEIE RFQEILNCLF QNREEIRQEY LKLEMLLKEN BACU008860/1-637 TDENN--KVM ISNPQEKETE R--------- ---------- ---------K bmy_13431T0/1-616 TDENN--KVM ISNPQEKEIE R--------- ---------- ---------K 451 500 ENSP00000263181/1-898 ELKSFYQQQC HKQIEMMCSE DKVEKATGKR DHRLAMLKTR RSYLEKRREE ENSBTAP00000042140/1-893 ELKSFYQQQC HKQIEMMCSE DKVEKATCKR DHRLAMLKTR RCYLEKKREE ENSTTRP00000009813/1-891 ELKSFYQQQC HKQIEMMCSE DKVEKATCKR DHRLAMLKTR RCYLEKKKEE BACU008860/1-637 SLNWSYIAHI GGQ------- -----ATCKR DHRLAMLKTR RCYLEKKREE bmy_13431T0/1-616 SLNWSYIAHV GGQ------- -----ATCKR DHRLAMLKTR RCYLEKKREE 501 550 ENSP00000263181/1-898 ELKQFDENTN WLHRVEKEMG LLSQNGHIPK ELKKDLHCHH LHLQNKDLKA ENSBTAP00000042140/1-893 ELKQFDENTN WLHRVQTEMG LLGPNGHIPK ELSKELHCHH LHLQNKDLKA ENSTTRP00000009813/1-891 ELKQFDENTN WLHRVETEMG LLGQNGHIPK ELNKELHCHH LHLQNKDLKT BACU008860/1-637 ELKQFDENTN WLHRVETEMG LLGQNGHIPK ELNKELHCHH LHLQNKDLKA bmy_13431T0/1-616 ELKQFDENTN WLHRVETEMG LLGQNGHIPK ELNKELHCHH LHLQNKDLKA 551 600 ENSP00000263181/1-898 QIRHMMDLAC LQEQQHRQTE AVLNALLPTL RKQYCTLKEA GLSNAAFESD ENSBTAP00000042140/1-893 QIKHIMDLAS LQEQQHRQTE AVLNALLPAL RKQYCALKES GLLNATFEAD ENSTTRP00000009813/1-891 QIKHMMDLAC LQEQQHRQTE AV-NALLPAL RKQYCA-KES GLLNATFESD BACU008860/1-637 QIKHMMDLAC LQEQQHRQTE AVLNALLPAL RKQYCALKES GLLNATFESD bmy_13431T0/1-616 QIKHMMDLAC LQEQQHRQTE AVLNALLPAL RKQYCALKES GLLNATFESD 601 650 ENSP00000263181/1-898 FKEIEHLVER KKVVVWADQT AEQPKQNDLP GISVLMTFPQ LGPVQPIPCC ENSBTAP00000042140/1-893 IKEIEHLVER KKVVVWADQT SEPAKQNNLP EVSILMTFPQ LGPVHSSPCC ENSTTRP00000009813/1-891 FKEIEHLVER KKVVVWADQT TEHAKQNDLP GVSILMNFPQ LGPVQSSPCC BACU008860/1-637 FKEIEHLVER KKVVVWADQT TEHAKQNDLP GVSILMTFPQ LGPVQSSPCC bmy_13431T0/1-616 FIEIEHLVER KKVVVWADQT TEHAKQNDLP GVSILMTFPQ LGPVQSSPCC 651 700 ENSP00000263181/1-898 SSSGGTNLVK IPTEKRTRRK LMPSPLKGQH TLKSPPSQSV QLNDSLSKEL ENSBTAP00000042140/1-893 TSPGESNLLK IPSQKRTRRK LMPSPLNIKH TQTSVESENT QLNDSLSKEL ENSTTRP00000009813/1-891 TSPSESNLLK IPPQKRTRRK LMPSPLKAKH PQKSTLSENM QLNDSLSKEL BACU008860/1-637 TSSSESNLLK IPPQKRTRRK LMPSPLKAKH PPKSTLSENM PLNDSLSREL bmy_13431T0/1-616 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000263181/1-898 QPIVYTPEDC RKAFQNPSTV TLMKPSSFTT SFQAISSNIN SDNCLKMLCE ENSBTAP00000042140/1-893 QPIVYTPENC RKTYQNPSTG TSLKP-SHTT SFQTISSNIN SDNSLKMLCE ENSTTRP00000009813/1-891 QPIVYTPEDC RKTSQYPSAV TLLKSSSHTT SFQAINSNTN SDNSLKM-CE BACU008860/1-637 QPIVYTPEDC RKTSQYPSAV TLLKSSSHTT SFQDINSNTN SDNSLKMLCE bmy_13431T0/1-616 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000263181/1-898 VAIPHNRRKE CGQEDLDSTF TICEDIKSSK CKLPEQESLP NDNKDILQRL ENSBTAP00000042140/1-893 VDIPLSMRKE HGQEDLKSTF LICEDTRSLE SELPEQESLP NNN--ILQRL ENSTTRP00000009813/1-891 VDIPLSKRKE YGQEDLESTF VICEDTKSLK SKLPEQESLP NNN--ILQRL BACU008860/1-637 VDIPLSKRKE CGQEDLESTF IIREDTNSLK SKLPEQESLP NNN--ILQRY bmy_13431T0/1-616 ---------- ------KYSF YFIK------ ---------- ---------- 801 850 ENSP00000263181/1-898 DPSSFSTKHS MPVPSMVPSY MAMTTAAKRK RKLTSSTSNS SLTADVNSGF ENSBTAP00000042140/1-893 APSSVSTKQP LPIPSTVPSY MAMTAAAKRK RKLISSAANT SLTAELNSGS ENSTTRP00000009813/1-891 APSSFSTKHS LPIPSIVPSY MAMTAAAKRK RKLTSSTSNT SLSAEVNSGS BACU008860/1-637 TGLFANSSFV LFT------- ---------- ---------- ---------- bmy_13431T0/1-616 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000263181/1-898 AKRVRQDNSS EKHLQENKPT MEHKRNICKI NPSMVRKFGR NISKGNLR ENSBTAP00000042140/1-893 AKRVHQDNSS DKHLQENKPT MDYKRNIHKI RPNMVRKFGR SISKGNLR ENSTTRP00000009813/1-891 AKRVHQDNSS DKHFQENRPT MEYKRNIHKV KPSMVRKFGR NISKGNLR BACU008860/1-637 ---------- ---------- ---------- ---------- -------- bmy_13431T0/1-616 ---------- ---------- ---------- ---------- --------