KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:14 2014 Check: 00 .. Name: ENSP00000364986/1-352 Len: 383 Check: 7850 Weight: 1.00 Name: ENSTTRP00000014946/1-349 Len: 383 Check: 4804 Weight: 1.00 Name: ENSBTAP00000042200/1-361 Len: 383 Check: 1778 Weight: 1.00 Name: BACU005671/1-316 Len: 383 Check: 669 Weight: 1.00 Name: bmy_09923T0/1-313 Len: 383 Check: 6731 Weight: 1.00 // 1 50 ENSP00000364986/1-352 MLRLLASGCA RGPGPGVG-- -------ARP AAGLFHPGRR QSRQASDAPR ENSTTRP00000014946/1-349 MLRLLASGCA RGPGGGGG-- -------ARH AAGLCDPGSS QSRQASDAPR ENSBTAP00000042200/1-361 MLRLLASTCA RGLGGRGGSR RLVSRGRARP VAGLCDPSRR LSRQASDAPR BACU005671/1-316 ---------- ---------- ---------- ---------- ---------- bmy_09923T0/1-313 ---------- ---GGRG--- --------RP AAGLCDPGSS QSRQASDAPR 51 100 ENSP00000364986/1-352 NQPPSPEFVA RPVGVCSMMR LPVQTSPEGL DAAFIGVPLD TGTSNRPGAR ENSTTRP00000014946/1-349 NQPPSSEFVA RSVGICSMMR LPVQASPEGL DAAFIGVPLD IGTSNRPGAR ENSBTAP00000042200/1-361 NQPPSPEFVA RSVGICSMMR LPVQATPEGL DAAFVGVPLD IGTSNRPGAR BACU005671/1-316 ---------- -------MMR LPVQASPEGL DAAFIGVPLD IGTSNRPGAR bmy_09923T0/1-313 NQPPSSEFVA RSVGICSMMR LPVQASPEGL DAAFIGVPLD IGTSNRPGAR 101 150 ENSP00000364986/1-352 FGPRRIREES VMLGTVNPST GALPFQSLMV ADLGDVNVNL YNLQDSCRRI ENSTTRP00000014946/1-349 FGPRRIREES VLLRTANPST GALPFQSLMV ADLGDVNVNL YNLQDSCRLI ENSBTAP00000042200/1-361 FGPRRIREES VLLRTTNPST GAVPFQFLRV ADLGDVNVNL YNLQDSCRLI BACU005671/1-316 FGPRRIREES VLLRPANPST GALPFQSLMV ADLGDVNVNL YNLQDSCRLI bmy_09923T0/1-313 FGPRRIREES VLLRPANPST GALPFQSLMV ADLGDVNVNL YNLQDSCRLI 151 200 ENSP00000364986/1-352 QEAYEKIVAA GCIPLTLGGD ---------- -----HTITY -------PIL ENSTTRP00000014946/1-349 REAYQKIVAA GCIPLTLXXX ---------- -----XXXXX -------XXX ENSBTAP00000042200/1-361 RADYQKIVAA GCVPLTLGGD ---------- -----HTITY -------PIL BACU005671/1-316 REAYQKIVAA GCIPLTLGNG ICKGEGSSLS SGSIYHELEY GYFSRPSPSV bmy_09923T0/1-313 REAYQKIVAA GCIPLTLGGD ---------- -----HTITY -------PIL 201 250 ENSP00000364986/1-352 QAMAKKHGPV GLLHVDAHTD TTDKALGEKL YHGAPFRRCV DEGLLDCKRV ENSTTRP00000014946/1-349 XXXXXXHGPM GLVHVDAHMD VADKALGEKL YHGTPFRRCV DEGLLDCKRV ENSBTAP00000042200/1-361 QAIAEKHGPV GLVHVDAHMD MADKALGEKL YHGTPFRRCV DEGLLDCKRV BACU005671/1-316 SEENSGHGPV GLVHVDAHMD TADTALGEKL YHGTPFRRCV DEGLLDCKRV bmy_09923T0/1-313 QAMAEKHGPV GLVHVDAHMD TADTALGEKL YHGTPFRRCV DEGLLDCKRV 251 300 ENSP00000364986/1-352 VQIGIRGSST TLDPYRYNRS QGFRVVLAED CWMKSLVPLM GEVRQQMGGK ENSTTRP00000014946/1-349 VQIGIRGSSM TLDTYRYSRS QGFQVVLAED CWMKSLVPLM GKVRQQMGVR ENSBTAP00000042200/1-361 VQIGIRGSST TLDTYRYSRS QGFRVVLAED CWLKSLVPLM GEVRQQMGGR BACU005671/1-316 VQIGIRGSSM TLDTYRYSRS QGFRVVLAED CWMKSLVPLM GKVRQQMGVR bmy_09923T0/1-313 VQIGIRGSSM TLDTYRYSRS QGFRVVLAED CWMKSLVPLM GKVRQQMGVR 301 350 ENSP00000364986/1-352 PIYISFDIDA LDPAYAPGTG TPEIAGLTPS QALEIIRGCQ GLNVMGCDLV ENSTTRP00000014946/1-349 PIYISFDIDG LDPAYAPGTG TPEIAGLTPS QXXXIIRGCQ GLNVVGCDL- ENSBTAP00000042200/1-361 PIYISFDIDG LDPAYAPGTG TPEIAGLTPS QALEIIRGCQ GLNVVGCDLV BACU005671/1-316 PIYISFDIDG LDPAYAPGTG TPEIAGLTPS QALEIIRGCQ GLNVVGCDLV bmy_09923T0/1-313 PIYISFDIDG LDPAYAPGTG TPEIAGLTPS QALEIIRGCQ GLNVVGCDLV 351 400 ENSP00000364986/1-352 EVSPPYDLSG NTALLAANLL FEMLCALPKV TTV ENSTTRP00000014946/1-349 -VSPPYDL-G NTALVAANLL FEMLCVLPKV TVA ENSBTAP00000042200/1-361 EVSPPYDPSG NTALVAANLL FEMLCVLPKV TVA BACU005671/1-316 EVSPPYDPSG NTALVAANLL FEMLCVLPKV TVV bmy_09923T0/1-313 EVSPPYDPS- ---------- ---------- ---