KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:15 2014 Check: 00 .. Name: ENSP00000373364/1-401 Len: 411 Check: 2715 Weight: 1.00 Name: ENSBTAP00000042222/1-405 Len: 411 Check: 7439 Weight: 1.00 Name: ENSTTRP00000003778/1-407 Len: 411 Check: 1709 Weight: 1.00 Name: bmy_12568T0/1-328 Len: 411 Check: 8733 Weight: 1.00 Name: BACU006695/1-300 Len: 411 Check: 5420 Weight: 1.00 // 1 50 ENSP00000373364/1-401 MMGLGNGRRS MKSPPLVLAA LVACIIVLGF NYWIASSRSV DLQTRIMELE ENSBTAP00000042222/1-405 MMGLGNGRRS MKSPPLVLAA LVACIIVLGF NYWIASSRSV DLQTRIVELE ENSTTRP00000003778/1-407 -MGLGNGRRS MKSPPLVLAA L-ACIIVLGF N-WIASSRSV NL-TRIVELE bmy_12568T0/1-328 -------MKR LDDKNLSVVA VNRC------ -----QCACL LL-------- BACU006695/1-300 ---------- -------MAM PVPCVI---- -----SCPPL GL-------- 51 100 ENSP00000373364/1-401 GRVRRAAAER GAVELKKNEF QGELEKQREQ LDKIQSSHNF QLESVNKLYQ ENSBTAP00000042222/1-405 GRVRRAAAER GAVEMKKNEF QGELEKQREQ LDKIQSSHNF QMESVNKLYQ ENSTTRP00000003778/1-407 GRVRRAAAER GAVEMKKNEF QGELEKQREQ LDKIQSSHNF QMESVNKLYQ bmy_12568T0/1-328 ---------- ---------- ---------- ---------- ---------- BACU006695/1-300 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000373364/1-401 DEKA------ VLVNNITTGE RLIRVLQDQL KTLQRNYGRL QQDVLQFQKN ENSBTAP00000042222/1-405 DEKA------ VLVNNITTGE RLIRTLQDQL KALQKSYGRL QQDVLQFQKN ENSTTRP00000003778/1-407 DEKARPASLQ QLVNNITTSE RLIRTLQDQL KALQKNYGRL QQDVLQFQKN bmy_12568T0/1-328 -HRA------ VLVNNITTSE RLIRILQDQL KALQKNYGRL QQDVLQFQKN BACU006695/1-300 ---------- ---------- -------DQL KALQKNYGRL QQDVLQFQKN 151 200 ENSP00000373364/1-401 QTNLERKFSY DLSQCINQMK EVKEQCEERI EEVTKKGNEA VASRDLSENN ENSBTAP00000042222/1-405 QTNLERKFSY DLNQCISQMK EVKEQCEERI EEVTRKGNEA MPSHDLNEQK ENSTTRP00000003778/1-407 QTNLERKFSY DLNQCINQMK EVKEQCEERI EEVTKKGNEA VASRDLSEQK bmy_12568T0/1-328 QTNLERKFSY DLNQCINQMK EVKEQCEERI EEVTKKGNEA VASRDLSEQK BACU006695/1-300 QTNLERKFSY DLNQCISQMK EVKEQCEERI EEVTKKGNEA VASRDLSEQK 201 250 ENSP00000373364/1-401 DQRQQLQALS EPQPRLQAAG LPHTEVPQGK GNVLGNSKSQ TPAPSSEVVL ENSBTAP00000042222/1-405 DQSQQPRAPS ESQPRPQEAG PPQAEVPEAR GNVPSHSEPQ TPAPSSEVAF ENSTTRP00000003778/1-407 DQSQQLQAPS EPQPRPQEAG LPQAEVPQAR GNMPSNSEPQ TPVPSSEAAL bmy_12568T0/1-328 DQSQQLRAPS EPQPRPQEAG LPQAEVPQAR GNMPSNSEPQ TPVPSSEAAL BACU006695/1-300 DQSQQLRAPS EPQPRPQEAG LPQAEVPQAR GNMPSNSEPQ TPVPSSEAAL 251 300 ENSP00000373364/1-401 DSKRQVEKEE TNEIQVVN-E EPQRDR--LP QEPGREQVVE -DRPVGGRGF ENSBTAP00000042222/1-405 DLKRQGEKEE TKEIQVVSEE ELQRDSLALP KEPGREQEVE GDRQVGGKGN ENSTTRP00000003778/1-407 DLKKQGEKEG TKEIQVVSKE ELQRDGLGLS KEPGREQNAE EDRRVGGKGR bmy_12568T0/1-328 DLKKQGEKEG TKEMQVASKE ELQRDSLGLL KEPGREQNAE EDRRVGGKGH BACU006695/1-300 DLKKQGEKEG TKEMQVVSKE ELQRDGLGLP KEPGREQNAE EDRRVGGKGH 301 350 ENSP00000373364/1-401 GGAGELGQTP QVQAALSVSQ ENPEMEGPER DQLVIPDGQE EEQEAAGEGR ENSBTAP00000042222/1-405 GEPGELGQIP QVPAALLASQ ENQEAEGPER DQLVIRDGQE EGQDADEEGR ENSTTRP00000003778/1-407 GEPGELGQTP QVPAALLASQ ENQEMESPER DQLVIPDGQE EERDADEEGR bmy_12568T0/1-328 GEPGEVGHTP QVPAALLASQ ENQEMEDPER DQLVIPDGQE EEQEADEEGR BACU006695/1-300 GEPGEVGHTP QVPAALLASQ ENQEMEGPER DQLVIPDGQE EEQEADEEGR 351 400 ENSP00000373364/1-401 NQQKLRGEDD YNMDENEAES ETDKQAALAG NDRNIDVFNV EDQKRDTINL ENSBTAP00000042222/1-405 NQQKLGADDD YNMDENEAES ETDKQAALAG NDKNRNVLNA ENQKGDTINL ENSTTRP00000003778/1-407 NQQKPGAEDD YNMDENEAES ETDKQAALAG NDRNGNVLNA ENQKGGTINL bmy_12568T0/1-328 KQQKLGADDD YNMDENEAES ETDKQAALAG NDRNGNVLNA ENQKGGTINL BACU006695/1-300 NQQKLGADDD YNMDENEAES ETDKQAALAG NDRNGNVLNA ENQKGGKINL 401 450 ENSP00000373364/1-401 LDQREKRNHT L ENSBTAP00000042222/1-405 LDQHEKRNHT L ENSTTRP00000003778/1-407 REQREKRNHT L bmy_12568T0/1-328 LEQREKRNHT L BACU006695/1-300 LEQREKRNHT L