KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:15 2014 Check: 00 .. Name: ENSBTAP00000042227/1-764 Len: 955 Check: 3294 Weight: 1.00 Name: BACU012265/1-945 Len: 955 Check: 7705 Weight: 1.00 Name: ENSP00000312778/1-777 Len: 955 Check: 2528 Weight: 1.00 Name: bmy_07621T0/1-630 Len: 955 Check: 4381 Weight: 1.00 Name: ENSTTRP00000000067/1-777 Len: 955 Check: 3209 Weight: 1.00 // 1 50 ENSBTAP00000042227/1-764 ---------- --HQELVSCV GWTTAEELYS CSDDHQIVKW NLLTGETSQI BACU012265/1-945 ---------M VTHQELVSCV GWNTAEELYS CSDDHQIVKW DLLTSETSQI ENSP00000312778/1-777 MRLKISLLKE PKHQELVSCV GWTTAEELYS CSDDHQIVKW NLLTSETTQI bmy_07621T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000067/1-777 MRLKISLLKE PKHQELVSCV GWNTAEELYS CSDDHQIVKW NLLTSETSQI 51 100 ENSBTAP00000042227/1-764 VKLPDDIYPI DLHWFPKSLG IKKQTQAEIF VLTSSDGKFH LISKLGRVEK BACU012265/1-945 VKLPDDLYPV DLHWFPKSLG IKKQTQAESF VLTSSDGKFH LISKLGRVEK ENSP00000312778/1-777 VKLPDDIYPI DFHWFPKSLG VKKQTQAESF VLTSSDGKFH LISKLGRVEK bmy_07621T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000067/1-777 VKLPDDIYPI DLHWFPKSLG IKKQTQAESF VLTSSDGKFH LISKLGRVEK 101 150 ENSBTAP00000042227/1-764 SVEAHSGAVL AGRWNYEGTA LVTVGEDGQI KIWSKTGMLR STLAHQGMSV BACU012265/1-945 SVEAHCGAVL AGRWNYEGTA LVTVGEDGQI KIWSKTGMLR STLAQQGTPV ENSP00000312778/1-777 SVEAHCGAVL AGRWNYEGTA LVTVGEDGQI KIWSKTGMLR STLAQQGTPV bmy_07621T0/1-630 ---------- ---------- ---------- ---------- -------TPV ENSTTRP00000000067/1-777 SVEAHCGAVL AGRWNYEGTA LVTVGEDGQI KIWSKTGMLR STLAQQGTPV 151 200 ENSBTAP00000042227/1-764 YSITWPPDVK IYLYTSSKEK SERPWQPTPV LLPGKSPSSL FLRLQWYHQK BACU012265/1-945 YSVAWGPDSE KVLYTAGKQL IIKPLQPNAK VLQWKAHDGI ILKVDWNSVN ENSP00000312778/1-777 YSVAWGPDSE KVLYTAGKQL IIKPLQPNAK VLQWKAHDGI ILKVDWNSVN bmy_07621T0/1-630 YSVAWGPDSE KVLYTAGKQL IIKPLQPNAK VLQWKAHDGI ILKVDWNSVN ENSTTRP00000000067/1-777 YSVAWGPDSE KVLYTAGKQL IIKPLQPNAK VLQWKAHDGI ILKVDWNSVN 201 250 ENSBTAP00000042227/1-764 SLIIDQSEDI K-KRWQESTE ELYKKDLHDP DNHDGAWRAD GNLLKILTVD BACU012265/1-945 DLILSAGEDC KYKVWDSYGR PLYSSQPHEH PITSVAWAPD GELFAVGSFH ENSP00000312778/1-777 DLILSAGEDC KYKVWDSYGR PLYNSQPHEH PITSVAWAPD GELFAVGSFH bmy_07621T0/1-630 DLILSAGEDC KYKVWDSYGR PLYSSQPHEH PITSVAWAPD GELFAVGSFH ENSTTRP00000000067/1-777 DLILSAGEDC KYKVWDSYGR PLYSSQPHEH PITSVAWAPD GELFAVGSFH 251 300 ENSBTAP00000042227/1-764 TLSICGETGW SYALEKPNTG SIFNIAWSVD GTQIAGACGN GHVVFAHVVE BACU012265/1-945 TLRLCDKTGW SYALEKPNTG SIFNITWSID GTQIAGACGN GHVVFAHVVE ENSP00000312778/1-777 TLRLCDKTGW SYALEKPNTG SIFNIAWSID GTQIAGACGN GHVVFAHVVE bmy_07621T0/1-630 TLRLCDKTGW SYALEKPNTG SIFNIAWSID GTQIAGACGN GHVVFAHVVE ENSTTRP00000000067/1-777 TLRLCDKTGW SYALEKPNTG SIFNITWSID GTQIAGACGN GHVVFAHVVE 301 350 ENSBTAP00000042227/1-764 QRWEWKNFQV TLTKRRTMQV RNVLNDAVDL LEFRDRVIKA SLNYAHLVVS BACU012265/1-945 QRWEWKDFQV TLTKRRTMQV RNVLNDAVDL LEFRDRVIKA SLNYAHLVVS ENSP00000312778/1-777 QHWEWKNFQV TLTKRRAMQV RNVLNDAVDL LEFRDRVIKA SLNYAHLVVS bmy_07621T0/1-630 QRWEWKDFQV TLTKRRTMQV RNVLNDAVDL LEFRDRVIKA SLNYAHLVVS ENSTTRP00000000067/1-777 QRWEWKDFQV TLTKRRTMQV RNVLNDAVDL LEFRDRVIKA SLNYAHLVVS 351 400 ENSBTAP00000042227/1-764 TSLQCYVFST KNWNTPLIFD LKEGTVSLIL QAERHFLLVD GGGIYLYSYE BACU012265/1-945 TSLQCYVFST KNWNTPLIFD LKEGTVSLIL QAERHFLLVD GGGIYLYSYE ENSP00000312778/1-777 TSLQCYVFST KNWNTPIIFD LKEGTVSLIL QAERHFLLVD GSSIYLYSYE bmy_07621T0/1-630 TSLQCYVFST KNWNTPLIFD LKEGTVSLIL QAERHFLLVD GGGIYLYSYE ENSTTRP00000000067/1-777 TSLQCYVFST KNWNTPLIFD LKEGTVSLIL QAERHFLLVD GGGIYLYSYD 401 450 ENSBTAP00000042227/1-764 GRFLSSPKFP GMRTDILNAQ TVSLSNDTIA IKDKADEKII FLFEASTGKP BACU012265/1-945 GRFLSSPKFP GMRTDILNAQ TVSLSNDTIA IKDKADEKII FLFEASTGKP ENSP00000312778/1-777 GRFISSPKFP GMRTDILNAQ TVSLSNDTIA IRDKADEKII FLFEASTGKP bmy_07621T0/1-630 GRFLSSPKFP GMRTDILNAQ TVSLSNDTIA IKDKADEKLI FLFEASTGKP ENSTTRP00000000067/1-777 GRFLSSPKFP GMRTDILNAQ TVSLSNDTIA IKDKADEKII FLFEASTGKP 451 500 ENSBTAP00000042227/1-764 MGDGKFLSHK NEVLEIALDQ KGLTNDRKIA FIDKNRDLYI TSVKRFGKEE BACU012265/1-945 LGDGKLLSHK NEILEIALDQ KGLTNDRKIA FIDKNRDLCI TSVKRFGKEE ENSP00000312778/1-777 LGDGKFLSHK NEILEIALDQ KGLTNDRKIA FIDKNRDLCI TSVKRFGKEE bmy_07621T0/1-630 LGDGKLLSHK NEILEIALDQ KGLTNDRKIA FIDKNRDLCI TSVKRFGKEE ENSTTRP00000000067/1-777 LGDGKLLSHK NEILEIALDQ KGLTNDRKIA FIDKNRDLCI TSVKRFGKEE 501 550 ENSBTAP00000042227/1-764 QIIKLGTMVH TLAWSDTCNI LCGLQDTRFT VWYYPNTVYV DRDILPKTLY BACU012265/1-945 QIIKLGTMVH TLAWSDTCNI LCGLQDTRFT VWYYPNTVYV DRDILPKTLY ENSP00000312778/1-777 QIIKLGTMVH TLAWNDTCNI LCGLQDTRFI VWYYPNTVYV DRDILPKTLY bmy_07621T0/1-630 QIIKLGTMVH TLAWSDTCNI LCGLQDTRFT VWYYPNTVYV DRDILPKTLY ENSTTRP00000000067/1-777 QIIKLGTMVH TLAWSDTCNI LCGLQDTRFT VWYYPNTVYV DRDILPKTLY 551 600 ENSBTAP00000042227/1-764 ERDASEFSKN PHIVSFVGNQ VTIRRADGSL VHISISPYPA ILHEYVSSSK BACU012265/1-945 ERDASEFSKN PHIVSFVGNQ VTIRRADGSL IHISISPYPA ILHEYVSSSK ENSP00000312778/1-777 ERDASEFSKN PHIVSFVGNQ VTIRRADGSL VHISITPYPA ILHEYVSSSK bmy_07621T0/1-630 ERDASEFSKN PHIVSFVGNQ VTIRRADGSL IHISISPYPA ILHEYVSSSK ENSTTRP00000000067/1-777 ERDASEFSKN PHIVSFVGNQ VTIRRADGSL IHISISPYPA ILHEYVSSSK 601 650 ENSBTAP00000042227/1-764 WEDAVRLCRF VKEQTMWACL AAMAVANQDM TTAEIAYAAI GEIDKVQYIN BACU012265/1-945 WEDAVRLCRF VKEQTMWACL AAMAVANRDM TTAEIAYAAI GEIDKVQYIN ENSP00000312778/1-777 WEDAVRLCRF VKEQTMWACL AAMAVANRDM TTAEIAYAAI GEIDKVQYIN bmy_07621T0/1-630 WEDAVRLCRF VKEQTMWACL AAMAVANRDM TTAEIAYAAI GEIDKVQYIN ENSTTRP00000000067/1-777 WEDAVRLCRF VKEQTMWACL AAMAVANRDM TTAEIAYAAI GEIDKVQYIN 651 700 ENSBTAP00000042227/1-764 SIKNLPSKES KMAHILMFSG NIQEAEIVLL QAGLVYQAIQ ININLYNWER BACU012265/1-945 SIKNLPSKES KMAHILMFSG NIQEAEMVLL QAGLVYQAIQ ININLYNWER ENSP00000312778/1-777 SIKNLPSKES KMAHILLFSG NIQEAEIVLL QAGLVYQAIQ ININLYNWER bmy_07621T0/1-630 SIKNLPSKES KMAHILMFSG NIQEAEMVLL QAGLVYQAIQ ININLYNWER ENSTTRP00000000067/1-777 SIKNLPSKES KMAHILMFSG NIQEAEMVLL QAGLVYQAIQ ININLYNWER 701 750 ENSBTAP00000042227/1-764 ALELAVKYKT HVDTVLAYRQ KFLETFGKQE TNKRYLQYAE G--------- BACU012265/1-945 ALELAVKYKT HVDTVLAYRQ KFLETFGKQE TNKRYLQYAE GAKNQKLKAS ENSP00000312778/1-777 ALELAVKYKT HVDTVLAYRQ KFLETFGKQE TNKRYLHYAE G--------- bmy_07621T0/1-630 ALELAVKYKT HVDTVLAYRQ KFLETFGKQE TNKRYLQYAE G--------- ENSTTRP00000000067/1-777 ALELAVKYKT HVDTVLAYRQ KFLETFGKQE TNKRYLQYAE G--------- 751 800 ENSBTAP00000042227/1-764 ---------- ---------- ---------- ---------- ---------- BACU012265/1-945 ISDSVPPYLG WVSVSMGPVP LPSLFDLPPL PALPFIAPET CALLYPDNPD ENSP00000312778/1-777 ---------- ---------- ---------- ---------- ---------- bmy_07621T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000067/1-777 ---------- ---------- ---------- ---------- ---------- 801 850 ENSBTAP00000042227/1-764 ---------- ---------- ---------- --LQIDW--- ---------- BACU012265/1-945 VHSPGPTSKA TTSTWPHPRL LHLRSLKVQD PNLLLQWPIF LALLTFLLLY ENSP00000312778/1-777 ---------- ---------- ---------- --LQIDW--- ---------- bmy_07621T0/1-630 ---------- ---------- ---------- --LEIDW--- ---------- ENSTTRP00000000067/1-777 ---------- ---------- ---------- --LEIDW--- ---------- 851 900 ENSBTAP00000042227/1-764 ---------- ---------- ---------- ---------- ---------- BACU012265/1-945 LLFDIKIDTL STRPVLFSLP LAVLPCCSHP ISIFPRRLSP TVYHLNQNQS ENSP00000312778/1-777 ---------- ---------- ---------- ---------- ---------- bmy_07621T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000067/1-777 ---------- ---------- ---------- ---------- ---------- 901 950 ENSBTAP00000042227/1-764 ---------- --EKIKAKIE MEITKE---- --------RE RSSGSQPTKS BACU012265/1-945 LRPSGSFVFL FKEKIQIKKD EKNTVKSFQE KNSEDGAIKQ KTETVTSEEE ENSP00000312778/1-777 ---------- --EKIKAKIE MEITKE---- --------RE QSSSSQSSKS bmy_07621T0/1-630 ---------- --EKIKAKIE MEITKE---- --------RE RSSSSQPSKN ENSTTRP00000000067/1-777 ---------- --EKIKAKIE MEITKE---- --------RE RSSSSQPSKN 951 1000 ENSBTAP00000042227/1-764 TGLKH BACU012265/1-945 VKLV- ENSP00000312778/1-777 IGLKP bmy_07621T0/1-630 IGLKH ENSTTRP00000000067/1-777 IGLMH