KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:19 2014 Check: 00 .. Name: ENSTTRP00000016271/1-588 Len: 598 Check: 167 Weight: 1.00 Name: ENSP00000377958/1-539 Len: 598 Check: 5934 Weight: 1.00 Name: ENSBTAP00000042274/1-542 Len: 598 Check: 4218 Weight: 1.00 Name: BACU013711/1-540 Len: 598 Check: 828 Weight: 1.00 Name: bmy_02993T0/1-594 Len: 598 Check: 9574 Weight: 1.00 // 1 50 ENSTTRP00000016271/1-588 ------PLSP PPPPGAGVVF RKLREGGGCL PLVPGQPESA SIRPSRAHAD ENSP00000377958/1-539 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042274/1-542 ---------- ---------- ---------- ---------- ---------- BACU013711/1-540 ---------- ---------- ---------- ---------- ---------- bmy_02993T0/1-594 AGPPGRPLSP PPPPGAGAAF WKLREGGGRL LLVPGQPESV SIRPSRAHAD 51 100 ENSTTRP00000016271/1-588 PSKLAMPENI VTRSGPPAGA AA---GRGKS AYQDRDKPAQ IRFSNISAAK ENSP00000377958/1-539 -----MPENV APRSGATAGA AG---GRGKG AYQDRDKPAQ IRFSNISAAK ENSBTAP00000042274/1-542 -----MPENV APRTGPPAGA AGAAGGRGKS AYQDRDKPAQ IRFSNISAAK BACU013711/1-540 -----MPENV APRSGPPTGV AG---GRGKS AYQDRDKPAQ IRFSNISAAK bmy_02993T0/1-594 PSKLAMPENV APRSGPPAGL AG---GRGRS AYQDRDKPAQ IRFSNISAAK 101 150 ENSTTRP00000016271/1-588 AVADAIRTSL GPKGMDKMIQ DGKGDVTITN DGATILKQMQ VLHPAARMLV ENSP00000377958/1-539 AVADAIRTSL GPKGMDKMIQ DGKGDVTITN DGATILKQMQ VLHPAARMLV ENSBTAP00000042274/1-542 AVADAIRTSL GPKGMDKMIQ DGKGDVTITN DGATILKQMQ VLHPAARMLV BACU013711/1-540 AVADAIRTSL GPKGMDKMIQ DGKGDVTITN DGATILKQMQ VLHPAARMLV bmy_02993T0/1-594 AVADAIRTSL GPKGMDKMIQ DGKGDVTITN DGATILKQMQ VLHPAARMLV 151 200 ENSTTRP00000016271/1-588 ELSKAQDIEA GDGTTSVVII AGSLLDSCTK LLQKXXXXXX XXXXXXXXXX ENSP00000377958/1-539 ELSKAQDIEA GDGTTSVVII AGSLLDSCTK LLQKGIHPTI ISESFQKALE ENSBTAP00000042274/1-542 ELSKAQDIEA GDGTTSVVII AGSLLDSCTK LLQKGIHPTI ISESFQKALE BACU013711/1-540 ELSKAQDIEA GDGTTSVVII AGSLLDSCTK LLQKGIHPTI ISESFQKALE bmy_02993T0/1-594 ELSKAQDIEA GDGTTSVVII AGSLLDSCTK LLQKGIHPTI ISESFQKALE 201 250 ENSTTRP00000016271/1-588 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXVVSQYSSL LSPMTVNAVM ENSP00000377958/1-539 KGIEILTDMS RPVELSDRET LLNSATTSLN SKVVSQYSSL LSPMSVNAVM ENSBTAP00000042274/1-542 KGIEILTDMS RPVELSDRET LLNSAATSLN SKVVSQYSSL LSPMSVDAVM BACU013711/1-540 KGTEILTDMS RPVELSDRET LLNSAATSLN SKVVSQYSSL LSPMTVNAVM bmy_02993T0/1-594 KGIEVLTDMS RPVELSDRET LLNSAATSLN SKVVSQYSSL LSPMTVNAVM 251 300 ENSTTRP00000016271/1-588 KVIDPATATS VDLRDVKIVK KLGGTIDDCE LVEGLVLTQK VANSGITRVE ENSP00000377958/1-539 KVIDPATATS VDLRDIKIVK KLGGTIDDCE LVEGLVLTQK VSNSGITRVE ENSBTAP00000042274/1-542 KVIDPATATS VDLRDIKIVK KLGGTIDDCE LVEGLVLTQK VANSGITRVE BACU013711/1-540 KVIDPATATS VDLRDVKIVK KLGGTIDDCE LVEGLVLTQR VANSGITRVE bmy_02993T0/1-594 KVIDPATATS VDLRDVKIVK KLGGTIDDCE LVEGLVLTQK VANSGITRVE 301 350 ENSTTRP00000016271/1-588 KAKIGLIQFC LSAPKTDMDN QIVVSDYVQM DRVLREERAY ILNLVKQIKK ENSP00000377958/1-539 KAKIGLIQFC LSAPKTDMDN QIVVSDYAQM DRVLREERAY ILNLVKQIKK ENSBTAP00000042274/1-542 KAKIGLIQFC LSAPKTDMDN QIVVSDYVQM DRVLREERAY ILNLVKQIKK BACU013711/1-540 KAKIGLIQFC LSAPKTDMDN QIVVSDYVQM DRVLREERAY ILNLVKQIKK bmy_02993T0/1-594 KAKIGLIQFC LSAPKTDMDN QIVVSDYVQM DRVLREERAY ILNLVKQIKK 351 400 ENSTTRP00000016271/1-588 TGCNVLLIQK SILRDALSDL ALHFLNKMKI MVVKDIERED IEFICKTIGT ENSP00000377958/1-539 TGCNVLLIQK SILRDALSDL ALHFLNKMKI MVIKDIERED IEFICKTIGT ENSBTAP00000042274/1-542 TGCNVLLIQK SILRDALSDL ALHFLNKMKI MVVKDIERED IEFICKTIGT BACU013711/1-540 TGCNVLLIQK SILRDALSDL ALHFLNKMKI MVVKDIERED IEFICKTIGT bmy_02993T0/1-594 TGCNVLLIQK SILRDALSDL ALHFLNKMKI MVVKDIERED IEFICKTIGT 401 450 ENSTTRP00000016271/1-588 KPVAHIDQFT ADMLGSAELA EEVSLNGSGK LIKITGCASP GKTVTIVVRG ENSP00000377958/1-539 KPVAHIDQFT ADMLGSAELA EEVNLNGSGK LLKITGCASP GKTVTIVVRG ENSBTAP00000042274/1-542 KPVAHVDQFT ADMLGSAELA EEVSLNGSGK LIKITGCASP GKTVTIVVRG BACU013711/1-540 KPVAHVDQFT ADMLGSAELA EEVSLNGSGK LIKITGCASP GKTVTIVVRG bmy_02993T0/1-594 KPVAHVDQFT ADMLGSAELA EEVSLNGSGK LIKITGCASP GKTVTIVVRG 451 500 ENSTTRP00000016271/1-588 SNKLVIEQSE RSIHDAQCVI RCLVKKRALI AGGGAPEIEL ALRLTEYSRT ENSP00000377958/1-539 SNKLVIEEAE RSIHDALCVI RCLVKKRALI AGGGAPEIEL ALRLTEYSRT ENSBTAP00000042274/1-542 SNKLVIEEAE RSIHDALCVI RCLVKKRALI AGGGAPEIEL ALRLTEYSRT BACU013711/1-540 SNKLVIEEAE RSIHDALCVI RCLVKKRALI AGGGAPEIEL ALRLTEYSRT bmy_02993T0/1-594 SNKLVIEEAE RSIHDALCVI RCLVKKRALI AGGGAPEIEL ALRLTEYSRT 501 550 ENSTTRP00000016271/1-588 LSGMESYCVR AFADAMEVIP STLAENAGLN PISTVTELRN RHAQGEKTTG ENSP00000377958/1-539 LSGMESYCVR AFADAMEVIP STLAENAGLN PISTVTELRN RHAQGEKTAG ENSBTAP00000042274/1-542 LSGMESYCIR AFADAMEVIP STLAENAGLN PISTVTELRN RHAQGEKTTG BACU013711/1-540 LSGMESYCVR AFADAMEVIP STLAENAGLN PISTVTELRN RHAQGEKTTG bmy_02993T0/1-594 LSGMESYCVR AFADAMEVIP STLAENAGLN PISTVTELRN RHAQGEKTTG 551 600 ENSTTRP00000016271/1-588 INVRKGGISN ILEELVVQPL LVSVSALTLA TETVRSILKI DDVVNS-R ENSP00000377958/1-539 INVRKGGISN ILEELVVQPL LVSVSALTLA TETVRSILKI DDVVNT-R ENSBTAP00000042274/1-542 INVRKGGISN ILEELVVQPL LVSVSALTLA TETVRSILKI DDVVNT-R BACU013711/1-540 INVRKGGISN ILEELVVQPL LVSVSALTLA TETVRSILKI DDVVCIYR bmy_02993T0/1-594 INVRKGGISN ILEELVVQPL LVSVSALTLA TETVRSILKI DDVVNS-R