KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:53:21 2014 Check: 00 .. Name: ENSP00000316649/1-480 Len: 519 Check: 7698 Weight: 1.00 Name: ENSTTRP00000010509/1-480 Len: 519 Check: 5704 Weight: 1.00 Name: ENSBTAP00000042296/1-480 Len: 519 Check: 7384 Weight: 1.00 Name: bmy_20336T0/1-519 Len: 519 Check: 9342 Weight: 1.00 // 1 50 ENSP00000316649/1-480 MNGEEEFFDA VT-------- ---------- ---------- ---------- ENSTTRP00000010509/1-480 MNGEEEFFDA VT-------- ---------- ---------- ---------- ENSBTAP00000042296/1-480 MNGEEEFFDA VT-------- ---------- ---------- ---------- bmy_20336T0/1-519 MNGEEEFFDA VTDTAWPVTL GLAFLSEMRG CYGSPELLVG CALTEVVKVI 51 100 ENSP00000316649/1-480 -GFDSDNSSG EFSEANQKVT GMIDLDTSKN NRIGKTGERP SQENGIQKHR ENSTTRP00000010509/1-480 -XXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000042296/1-480 -GFDSDNSSG EFSEANQRLT GVIHVDTSKS NGIGKVGDGP PQENGIQKHR bmy_20336T0/1-519 DSFDSDNSSG EFSEANQRVT GVIHVDTSKS NGIGKVGERP PQENGIQKHR 101 150 ENSP00000316649/1-480 TSLPAPMFSR SDFSVWTILK KCVGLELSKI TMPIAFNEPL SFLQRITEYM ENSTTRP00000010509/1-480 TSLPAPMFTR SDFSVWSILK KCIGLELSKI TMPIAFNEPL SFLQRITEYM ENSBTAP00000042296/1-480 TSLPAPMFTR SDFSVWSILK KCIGLELSKI TMPIAFNEPL SFLQRITEYM bmy_20336T0/1-519 TSLPAPMFTR SDFSVWSILK KCIGLELSKI TMPIAFNEPL SFLQRITEYM 151 200 ENSP00000316649/1-480 EHVYLIHRAS CQPQPLERMQ SVAAFAVSAV ASQWERTGKP FNPLLGETYE ENSTTRP00000010509/1-480 EHVYLIHKAS CQPQPLERMQ SVAAFAVSAV ASQWERTGKP FNPLLGETYE ENSBTAP00000042296/1-480 EHVYLIHRAS RQPQSLERMQ SVAAFAVSAV ASQWERTGKP FNPLLGETYE bmy_20336T0/1-519 EHVYLVHKAS CQPQPLERMQ SVAAFAVSAV ASQWERTGKP FNPLLGETYE 201 250 ENSP00000316649/1-480 LIREDLGFRF ISEQVSHHPP ISAFHSEGLN HDFLFHGSIY PKLKFWGKSV ENSTTRP00000010509/1-480 LTREDLGFRF ISEQVSHHPP ISAFYSEGLH QDFLFHGSIY PKLKFWGKSV ENSBTAP00000042296/1-480 LIREDLGFRF ISEQVSHHPP ISAFYSEGLH QDFLFHGSIY PKLKFWGKSV bmy_20336T0/1-519 LTREDLGFRF ISEQVSHHPP VSAFYSEGLH QDFLFHGSIY PKLKFWGKSV 251 300 ENSP00000316649/1-480 EAEPRGTITL ELLKHNEAYT WTNPTCCVHN VIIGKLWIEQ YGTVEILNHR ENSTTRP00000010509/1-480 EAEPRGTITL ELLKHNEAYT WTNPTCCVHN VIIGKLWIEQ YGTVEIVNHR ENSBTAP00000042296/1-480 EAEPRGTITL ELLKHKEAYT WTNPTCCVHN VIIGKLWIEQ YGTVEILNHR bmy_20336T0/1-519 EAEPRGTITL ELLKHNEAYT WTNPTCCVHN VIIGKLWIEQ YGTVEIVNHR 301 350 ENSP00000316649/1-480 TGHKCVLHFK PCGLFGKELH KVEGHIQDKN KKKLFMIYGK WTECLWGIDP ENSTTRP00000010509/1-480 TGDKCVLHFK PCGLFGKELH KVEGYIQDKN KKKLFMIYGK WTECLWGLDP ENSBTAP00000042296/1-480 TGDKCVLHFK PCGLFGKELH KVEGYIQDKS KKKLFVIYGK WTECLWGIDP bmy_20336T0/1-519 TGDKCVLHFK PCGLFGKELH KVEGYIQDKN KKKLFMIYGK WTECLWGLDP 351 400 ENSP00000316649/1-480 VSYESFKKQE RRGDHLRKAK LDEDSGKADS DVADDVPVAQ ETVQVIPGSK ENSTTRP00000010509/1-480 AAYESFKKQE RRTDPLRKTK LDDCPEKADG DVVDAVPEAQ ETVQVIPGSK ENSBTAP00000042296/1-480 VTYESFRKQE RRGDSLRKTK PDDGPEKADC NVADSVPESQ ETVQVIPGSK bmy_20336T0/1-519 AAYESFKKQE RRTDSLRKTK LDDCPEKADG DVVDAVPEAQ ETVQVIPGSK 401 450 ENSP00000316649/1-480 LLWRINTRPP NSAQMYNFTS FTVSLNELET GMEKTLPPTD CRLRPDIRGM ENSTTRP00000010509/1-480 LLWRVNTRPP NSAQMYNFTS FTVSLNELET GMEKILAPTD CRLRPDIRGM ENSBTAP00000042296/1-480 LLWRVNTRPP NSAQMYNFTS FTVSLNELET GMEKILAPTD CRLRPDIRGM bmy_20336T0/1-519 LLWRINTRPP NSAQMYNFTS FTVSLNELET GMEKILAPTD CRLRPDIRGM 451 500 ENSP00000316649/1-480 ENGNMDLASQ EKERLEEKQR EARRERAKEE AEWQTRWFYP GNNPYTGTPD ENSTTRP00000010509/1-480 ENGNMDLASQ EKERLEEKQR EARRERAREE AEWQTRWFHR GSNPYTGTPD ENSBTAP00000042296/1-480 ENGNMDLASQ EKERLEEKQR EARRERAREE AEWQTRWFHR GSNPYTGTPD bmy_20336T0/1-519 ENGNMDLASQ EKERLEEKQR EARRERAREE AEWQTRWFHR GSNPYTGTPD 501 550 ENSP00000316649/1-480 WLYAGDYFER NFSDCPDIY ENSTTRP00000010509/1-480 WLYVGGYFER DFSGCPDIY ENSBTAP00000042296/1-480 WLYAGGYFER DFSGCPDIY bmy_20336T0/1-519 WLYVGGYFER DFSGCPDIY