KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:21 2014 Check: 00 .. Name: ENSP00000465772/1-673 Len: 713 Check: 6695 Weight: 1.00 Name: ENSBTAP00000042303/1-673 Len: 713 Check: 6814 Weight: 1.00 Name: ENSTTRP00000010075/1-656 Len: 713 Check: 6597 Weight: 1.00 Name: bmy_13252T0/1-604 Len: 713 Check: 9757 Weight: 1.00 Name: BACU008341/1-654 Len: 713 Check: 6244 Weight: 1.00 // 1 50 ENSP00000465772/1-673 MNRKDSKRKS HQECTGKIGG RGRPRQVRRH KTCPSPREIS KVMASMNLGL ENSBTAP00000042303/1-673 MNRKDSKRKS HQECPVKTGG RGRPRQARRH KTCPSPREIS KVMASMALGM ENSTTRP00000010075/1-656 MNRKDSKRKS YQECPGKTGG RGRPRQARRH KTCPSPREIS KVMASMALGM bmy_13252T0/1-604 ---------- ---------- ---------- ---------- --MASMALGM BACU008341/1-654 ---------- ---------- ---------- ---------- --MASMALGM 51 100 ENSP00000465772/1-673 LSEGGCSEDE LLEKCIQSFD SAGSLCHEDH MLNMVLAMHS WVLPSADLAA ENSBTAP00000042303/1-673 LNEGGCSEDE LLEKCIQSFD SAGSLRRGDH VLNMVLAMHS WVLPSAHFAA ENSTTRP00000010075/1-656 LNEGGCSEDD LLEKCIQSFD SAGSLRRGDH ILNMVLAMHN WVLPSAHLAA bmy_13252T0/1-604 LNEGGCSEDD LLEKCIQSF- ---------- ---------- ---------- BACU008341/1-654 MNEGGCSEDD LLEKCIQSFD SAGSLRRGDH ILNMVLAMHS WVLPSAHLAA 101 150 ENSP00000465772/1-673 RLLTSY-QKA TGDTQELRRL QICHLVRYWL MRHPEVMHQD PQLEEVIGRF ENSBTAP00000042303/1-673 RLLTLY-QEA TGSTQELRRL QICHLVRYWL TQHPETMHQD PQLEEVIGRF ENSTTRP00000010075/1-656 RLLTLYYQEA TGSTQELRRL QICHLVRYWL TQHPETVHQE PQLEEVIGRF bmy_13252T0/1-604 ---------- ---------- ---------- ------VHQE PQLEEVIGRF BACU008341/1-654 RLLTLY--PP GAMSSGWRAE GRDERAWYWL TQHPETVHQE PQLEEVIGRF 151 200 ENSP00000465772/1-673 WATVAREGNS AQRRLGDSSD LLSPGGPGPP LPMSSPGLGK KRKVSLLFDH ENSBTAP00000042303/1-673 WATVEQEGNS VQQSLGDFSS RLSPGGPGPP HPMSSPGLGK KRKVSLLFDH ENSTTRP00000010075/1-656 WATVEQEGNA TQRSLGDSAN LLSPGGPGPP PPLSSPGLGK KRKVSLLFDH bmy_13252T0/1-604 WATVEQEGNA TQRSLGDSTN LLSPGGPGPP PPISSPGLGK KRKVSLLFDH BACU008341/1-654 WATVEQEGNA TQRSLGDSAN LLSPGGPGPP PPISSPGLGK KRKVSLLFDH 201 250 ENSP00000465772/1-673 LETGELAQHL TYLEFRSFQA ITPQDLRSYV LQGSVRGCPA LEGSVGLSNS ENSBTAP00000042303/1-673 LETGELAEHL TYLEFRSFQA ITPQDLRDYV LQGSVRGCPT LEGSVGLSNS ENSTTRP00000010075/1-656 LETEELAEHL TYLEFRSFQA ITPQDLRGYV LQGSVRGCPA LEGSVGLSNS bmy_13252T0/1-604 LETEELAEHL TYLEFRSFQA ITPQDLRGYV LQGSVRGCPA LEGSVGLSNS BACU008341/1-654 LETEELAEHL TYLEFRSFQA ITPQDLRGYV LQGSVRGCPA LEGSVGLSNS 251 300 ENSP00000465772/1-673 VSRWVQVMVL SRPGPLQRAQ VLDKFIHVAQ RLHQLQNFNT LMAVTGGLCH ENSBTAP00000042303/1-673 VSRWVQVMVL SRPGPAQRAQ VLDKFIQVAQ KLLQLHNFNT LMAVTGGLCH ENSTTRP00000010075/1-656 VSRWVQVMVL SRPGPAQRGQ VLDKFIHVAQ RLLQLQNFNT LMAVTGGLCH bmy_13252T0/1-604 VSRWVQVMVL SRPGPAQRGQ VLDKFIHVAQ RLLQLQNFNT LMAVTGGLCH BACU008341/1-654 VSRWVQVMVL SRPGPAQRGQ VLDKFIHVAQ RLLQMQNFNT LMAVTGGLCH 301 350 ENSP00000465772/1-673 SAISRLKDSH AHLSPDSTKA LLELTELLAS HNNYARYRRT WAGCAGFRLP ENSBTAP00000042303/1-673 SAISRLKDSH AHLSPDSTKA LLELTELLAA HNNYARYRRT WAGCMDFRLP ENSTTRP00000010075/1-656 SAISRLKDSH THLSPDSTKA LLELTELLAA HNNYACYRRT WAGCTGFRLP bmy_13252T0/1-604 SAISRLKDSY THLSPDSTKA LLELTELLAA HNNYACYRRT WAGCTGFRLP BACU008341/1-654 SAISRLKDSY THLSPDSTKA LLELTKLLAA HNNYACYRRT WAGCTGFRLP 351 400 ENSP00000465772/1-673 VLGVHLKDLV SLHEAQPDRL PDGRLHLPKL NNLYLRLQEL VALQGQHPPC ENSBTAP00000042303/1-673 VLGVHLKDLV ALNEAQPDRL PDGRLHLPKL NSLYLRLQEL AALQQQHPPG ENSTTRP00000010075/1-656 VLGVHLKDLV SLHEAQPDRL PDGRLHLPKL NSLYLRLQEL AALQRQHPPC bmy_13252T0/1-604 VLGVHLKDLV SLHEAQPDRL PDGRLHLPKL NSLYLRLQEL ATLQRQHPPC BACU008341/1-654 VLGVHLKDLV SLHEAQPDRL PDGRLHLPKL NSLYLRLQEL ATLQRQHPPC 401 450 ENSP00000465772/1-673 SANEDLLHLL TLSLDLFYTE DEIYELSYAR EPRCPKSLPP SPFNAPLVVE ENSBTAP00000042303/1-673 NASEDLLHLL TLSLDLFYTE DEIYELSYAR EPRCPKSLPP SPFKAPLVVE ENSTTRP00000010075/1-656 SAKEDLLHLL TLSLDLFYTE DEIYELSYAR EPRCPKSLPP SPFQVPLVVQ bmy_13252T0/1-604 SANEDLLHLL TLSLDLFHTE DEIYELSYAR EPRCPKSLPP SPFKVPLVVE BACU008341/1-654 NANEDLLHLL TLSLDLFHTE DEIYELSYAR EPRCPKSLPP SPFKVPLVVE 451 500 ENSP00000465772/1-673 WAPGVTPKPD RVTLGRHVEQ LVESVFKNYD PEGRGTISQE DFERLSGNFP ENSBTAP00000042303/1-673 WAPGVTPKPD TVTLGRHVEQ LVESVFKNYD PDGRGTISQE DFERLSGNFP ENSTTRP00000010075/1-656 WAPGVTPKPD RVTLGRHVEQ LVESVFKNYD PEGRGTISQE DFERLSGNFP bmy_13252T0/1-604 WAPGVTPKPD RVTLGRHVEQ LVESVFKNYD PEGRGTISQE DFERLSGNFP BACU008341/1-654 WAPGVTPKPD RVTLGRHVEQ LVESVFKNYD PEGRGTISQE DFERLSGNFP 501 550 ENSP00000465772/1-673 FACHGLHPPP RQGRGSFSRE ELTGYLLRAS AICSKLGLAF LHTFHEVTFR ENSBTAP00000042303/1-673 FACHGLHPPP CQGSGSFSRE ELTGYLLRAS AICSKLGLAF LHTFQEVTFR ENSTTRP00000010075/1-656 FACHGLHPPP RQGSGSFSRE ELTGYLLQAS AICSKLGLTF LHTFQEVTFR bmy_13252T0/1-604 FACHGLHPPP RQGSGSFSRE ELTGYLLQAS AICSKLGLAF LHTFQEVTFR BACU008341/1-654 FACRGLHPPP RQGSGSFSRE ELTGYLLQAS AICSKLGLAF LHTFQEVTFR 551 600 ENSP00000465772/1-673 KPTFCDSCSG F--------- ------LWGV TKQGYRCREC GLCCHKHCRD ENSBTAP00000042303/1-673 KPTFCNSCSG F--------- ------LWGV TKQGYRCRDC GLCCHRHCRD ENSTTRP00000010075/1-656 KPTFCGICSG F--------- ------LWGV TKQGYRCRDC GLCCHKHCRD bmy_13252T0/1-604 KPTFCGSCNG FVSTPPAVTY SAFSSQLWGV TKQGYRCRDC GLCCHKHCRD BACU008341/1-654 KPTFCGSCSG F--------- ------LWGV TKQGYRCRDC GLCCHKHCRD 601 650 ENSP00000465772/1-673 QVKVECKKRP GAKGDAGPPG APVPSTPAPH ASCGSEENHS YTLSLEPETG ENSBTAP00000042303/1-673 QVKVECKKRP GAKGDASPPE APVPPTPVPQ ASCGSEDNLS YTLSLEPETG ENSTTRP00000010075/1-656 QVKVECKKRP GAKGDVSPPE APVPPTPVPH AGCGSEDNLS YTLSLEPETR bmy_13252T0/1-604 QVKVECKKRP GAKGDVSPPE APVPPTPVPH AGCGSEDNLS YTLSLEPETG BACU008341/1-654 QVKVECKKRP GAKGDVSPPE APVPPTPVPH AGCGSEDNLS YTLSLEPETG 651 700 ENSP00000465772/1-673 CQLRHAWTQT ESPHPSWETD TV----PCPV MDPPSTA--- ---------- ENSBTAP00000042303/1-673 CHVRHAWTQT ESPHPSWEPE TV----PLPA KASPPTE--- ---------- ENSTTRP00000010075/1-656 WHVCHAWTQT EPSHPSWEPE T--------- ---------- ---------- bmy_13252T0/1-604 WHVCHAWTQT EPSHPSWEPE TVRRSCPYPQ LDTGRPAYLP GGTQTDLGKH BACU008341/1-654 WHVCHAWTQT EPSHPSWEPE TVRRSCPYPQ LDTGRPAYLP GGTQTDLGKH 701 750 ENSP00000465772/1-673 -------SSK LDS ENSBTAP00000042303/1-673 -------SSK LNS ENSTTRP00000010075/1-656 ---------- --- bmy_13252T0/1-604 RKVKICKSPQ LLG BACU008341/1-654 RKVKICKSPQ LLG