KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:22 2014 Check: 00 .. Name: bmy_05081T0/1-334 Len: 475 Check: 6086 Weight: 1.00 Name: ENSP00000369960/1-475 Len: 475 Check: 5830 Weight: 1.00 Name: ENSBTAP00000042306/1-466 Len: 475 Check: 6492 Weight: 1.00 Name: BACU015289/1-425 Len: 475 Check: 626 Weight: 1.00 Name: ENSTTRP00000004551/1-423 Len: 475 Check: 7049 Weight: 1.00 // 1 50 bmy_05081T0/1-334 MVFLSGNASD SSNCTHPPPP VNISKAILLG VILGGLILFG VLGNILVILS ENSP00000369960/1-475 MVFLSGNASD SSNCTQPPAP VNISKAILLG VILGGLILFG VLGNILVILS ENSBTAP00000042306/1-466 MVFLSGNASD SSNCTHPPPP VNISKAILLG VILGGLILFG VLGNILVILS BACU015289/1-425 MVFLPGNASD SSNCTHPPPP ANISKAILLG VILGGLILFG VLGNILVILS ENSTTRP00000004551/1-423 MVFLSGNASD SSNCTHPPPP VNISKAILLG VILGGLILFG VLGNILVILS 51 100 bmy_05081T0/1-334 VACHRHLHSV THYYIVNLAV ADLLLTSTVL PFSAIFEILG YWAFGRVFCN ENSP00000369960/1-475 VACHRHLHSV THYYIVNLAV ADLLLTSTVL PFSAIFEVLG YWAFGRVFCN ENSBTAP00000042306/1-466 VACHRHLHSV THYYIVNLAV ADLLLTSTVL PFSAIFEILG YWAFGRVFCN BACU015289/1-425 VACHRHLHSV THYYIVNLAV ADLLLTSTVL PFSAIFEILG YWAFGRVFCN ENSTTRP00000004551/1-423 VACHRHLHSV THYYIVNLAV ADLLLTSTVL PFSAIFEILG YWAFGRVFCN 101 150 bmy_05081T0/1-334 IWAAVDVLCC TASIMGLCII SIDRYIGVSY PLRYPTIVTQ KRGLMALLCV ENSP00000369960/1-475 IWAAVDVLCC TASIMGLCII SIDRYIGVSY PLRYPTIVTQ RRGLMALLCV ENSBTAP00000042306/1-466 VWAAVDVLCC TASIMGLCII SIDRYIGVSY PLRYPTIVTQ KRGLMALLCV BACU015289/1-425 IWAAVDVLCC TASIMGLCII SIDRYIGVSY PLRYPTIVTQ KRGLMALLCV ENSTTRP00000004551/1-423 IWAAVDVLCC TASIMGLCII SIDRYIGVSY PLRYPTIVTQ KRGLMALLCV 151 200 bmy_05081T0/1-334 WALSLVISIG PLFGWRQPAP EDETICQINE EPGYVLFSAL GSFYVPLTII ENSP00000369960/1-475 WALSLVISIG PLFGWRQPAP EDETICQINE EPGYVLFSAL GSFYLPLAII ENSBTAP00000042306/1-466 WALSLVISIG PLFGWRQPAP EDETICQINE EPGYVLFSAL GSFYVPLTII BACU015289/1-425 WALSLVISIG PLFGWRQPAP EDETICQINE EPGYVLFSAL GSFYVPLTII ENSTTRP00000004551/1-423 WALSLVISIG PLFGWRQPAP EDETICQINE EPGYVLFSAL GSFYVPLTII 201 250 bmy_05081T0/1-334 LVMYCRVYVV AKRESRGLKS GLKTDKSDSE QVTLRIHRKN APVGGRGLPS ENSP00000369960/1-475 LVMYCRVYVV AKRESRGLKS GLKTDKSDSE QVTLRIHRKN APAGGSGMAS ENSBTAP00000042306/1-466 LVMYCRVYVV AKRESRGLKS GLKTDKSDSE QVTLRIHRKN AQVGGSGVTS BACU015289/1-425 LVMYCRVYVV AKRESRGLKS GLKTHKSDSE RVTLRIHRKN APVGGSGVPS ENSTTRP00000004551/1-423 LVMYCRVYVV AKRESRGLKS GLKTDKSDSE RVTLRIHRKN VPVGGSGVSS 251 300 bmy_05081T0/1-334 AKNKTHFSVR LLKFSREKKA AKTLGIVVGC FVLCWLPFFL VMPIGK---- ENSP00000369960/1-475 AKTKTHFSVR LLKFSREKKA AKTLGIVVGC FVLCWLPFFL VMPIGSFFPD ENSBTAP00000042306/1-466 AKNKTHFSVR LLKFSREKKA AKTLGIVVGC FVLCWLPFFL VMPIGSFFPD BACU015289/1-425 AKNKTHFSVR LLKFSREKKA AKTLGIVVGC FVLCWLPFFL VMPIGSFFPD ENSTTRP00000004551/1-423 AKNKTHFSVR LLKFSREKKA AKTLGIVVGC FVLCWLPFFL VMPIGSFFPD 301 350 bmy_05081T0/1-334 ---------- ---------- --------SL QHLVLAFR-- ---------- ENSP00000369960/1-475 FKPSETVFKI VFWLGYLNSC INPIIYPCSS QEFKKAFQNV LRIQCLCRKQ ENSBTAP00000042306/1-466 FRPSETVFKI AFWLGYLNSC INPIIYPCSS QEFKKAFQNV LRIQCLRRKQ BACU015289/1-425 FRPSETVFKI AFWLGYLNSC INPIIYPCSS QEFKKAFQNV LRIQCLSRKH ENSTTRP00000004551/1-423 FRPSETVFKI AFWLGYLNSC INPIIYPCSS QEFKKAFQNV LRIQCLHRRQ 351 400 bmy_05081T0/1-334 --------SL HPLPIMLPQT H--------- ---------- SQG---WK-- ENSP00000369960/1-475 SSKHALGYTL HPPSQAVEGQ HKDMVRIPVG SRETFYRISK TDGVCEWKFF ENSBTAP00000042306/1-466 SSKHTLGYTL HAPSHVLEGQ HKDLVRIPVG SAETFYKISK TDGVCEWKIF BACU015289/1-425 SSKHALGYTL HPPSHALEGQ HKDLVRIPVG SGETFYKISK TDGVCEWKFF ENSTTRP00000004551/1-423 SSKHALGYTL HAPSHALEGQ HKDLVRIPVG SGETFYKISK TDGVCEWKFF 401 450 bmy_05081T0/1-334 --------RK DLHFKQQS-- ---------- ---------- ---------- ENSP00000369960/1-475 SSMPRGSARI TVSKDQSSCT TARTKSRSVT RLECSGMILA HCNLRLPGSR ENSBTAP00000042306/1-466 SSLPRGSARM AVARDPSACT TARVRSKSFL QVCCC----- -LGPSTPSRG BACU015289/1-425 SSLPRGSARI TVPKDQSACT TARDF----- ---------- ---------- ENSTTRP00000004551/1-423 SSLPRGSARI TVPKDQSACA TAR------- ---------- ---------- 451 500 bmy_05081T0/1-334 ---------- ---------- ----- ENSP00000369960/1-475 DSPASASQAA GTTGMCHQAD ATRPS ENSBTAP00000042306/1-466 ENHQIPTIKI HTISLSENGE EV--- BACU015289/1-425 ---------- ---------- ----- ENSTTRP00000004551/1-423 ---------- ---------- -----