KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:23 2014 Check: 00 .. Name: ENSP00000365401/1-627 Len: 713 Check: 2942 Weight: 1.00 Name: ENSBTAP00000042324/1-595 Len: 713 Check: 395 Weight: 1.00 Name: ENSTTRP00000016089/1-627 Len: 713 Check: 7083 Weight: 1.00 Name: BACU009765/1-525 Len: 713 Check: 3950 Weight: 1.00 Name: bmy_16651T0/1-713 Len: 713 Check: 1965 Weight: 1.00 // 1 50 ENSP00000365401/1-627 MEEADRILIH SLRQAGTAVP PDVQTLRAFT TELVVEAVVR CLRVINPAVG ENSBTAP00000042324/1-595 MEEADRILIH SLRQAGTAVP PDVQTLRAFT TELVVEAVVR CLRVINPAVG ENSTTRP00000016089/1-627 MEEADRILIH SLRQAGTAVP PDVQTLRAFT TELVVEAVVR CLRVINPAVG BACU009765/1-525 MEEADRILIH SLRQAGTAVP PDVQTLRAFT TELVVEAVVR CLRVINPAVG bmy_16651T0/1-713 MEEADRILIH SLRQAGTAVP PDVQTLRAFT TELVVEAVVR CLRVINPAVG 51 100 ENSP00000365401/1-627 SGLSPLLPLA MSARFRLAMS LAQACMDLGY PLELGYQNFL YPSEPDLRDL ENSBTAP00000042324/1-595 SGLSPLLPLA MSARFRLAMS LAQACMDLGY PLELGYQNFL YPSEPDLRDL ENSTTRP00000016089/1-627 SGLSPLLPLA MSARFRLAMS LAQACMDLGY PLELGYQNFL YPSEPDLRDL BACU009765/1-525 SGLSPLLPLA MSARFRLAMS LAQACMDLGY PLELGYQNFL YPSEPDLRDL bmy_16651T0/1-713 SGLSPLLPLA MSARFRLAMS LAQACMDLGY PLELGYQNFL YPSEPDLRDL 101 150 ENSP00000365401/1-627 LLFLAERLPT DASEDADQPA GDSAILLRAI GSQIRDQLAL PWVPPHLRTP ENSBTAP00000042324/1-595 LLFLAERLPT DASEDADQSA GESAILLRAI GSRIRDHLAL PWVPPLLRTP ENSTTRP00000016089/1-627 LLFLAERLPT DASEDADQPA GDSAILLRAI GSQIRDQLAL PWVPPLLRTP BACU009765/1-525 LLFLAERLPT DASEDADQPA GDSAILLRAI GSQIRDQLAL PWVPPLLRTP bmy_16651T0/1-713 LLFLAERLPT DASEDADQPA GDSAILLRAI GSQIRDQLAL PWVPPLLRTP 151 200 ENSP00000365401/1-627 KLQHLQGSAL QKPFHASRLV VPELSSRGEP REFQASPLLL PVPTQVPQPV ENSBTAP00000042324/1-595 KLQYLQGSAH QKPFHASRLV MPELSSRGES REFQAGPLLL PVPAQVPQPA ENSTTRP00000016089/1-627 KLQHLQGSAH QKPFHASRLF MPDLLSRGEP REFQASPLLL PAPAQVPQPA BACU009765/1-525 KLQRLQGSAH QKPFHASRLF MPDLLSRGEP QEFQASPLLL PAPAQVPQPA bmy_16651T0/1-713 KLQHLQGSAH QKPFHASRLF MPDLLSRGEP REFQASPLLL PAPAQVPQPA 201 250 ENSP00000365401/1-627 GRVASLLEHH ALQLCQQTGR DRPGDEDWVH RTSRLPPQED TRAQRQRLQK ENSBTAP00000042324/1-595 ARAASLLEHH AIQLCQHTGR DRAGDEDWGH RTSRLPAQED TRAQRQRLQK ENSTTRP00000016089/1-627 ARVASLLECH AIQLCQHTGR DRPRDEDWVH RASRLPVQED TRAQRQRLQK BACU009765/1-525 ARVASLLERH AIQLCQHTGR DCPRDEDWVH RASRLPVQED TRAQRQRLQK bmy_16651T0/1-713 ARVASLLERH AIQLCQHTGR DRPRDEDWVH RASRLPVQED TRAQRQRLQK 251 300 ENSP00000365401/1-627 QLTEHLRQSW GLLGAPIQAR DLGELLQAWG AGAKTGAPKG SRFTHSEKFT ENSBTAP00000042324/1-595 HLAEHLRQTW GRPGPPQQAR DLGEVLQAWG AGARPGTPKG SRFTHSKKFT ENSTTRP00000016089/1-627 HLAEHLRQTW GRPGPPQQAR DLGELLXXXX XXXXXXXXXX XXXXXXXXXX BACU009765/1-525 HLAEHLRQTW GRPGPPQQAR DLGELLQAWG AGARTGAPKG SRFTHSEKFT bmy_16651T0/1-713 HLAEHLRQTW GRPGPPQQAR DLGELLQAWG AGARTGAPKG SRFTHSEKFT 301 350 ENSP00000365401/1-627 FHLEPQAQAT QVSDVPATSR RPEQVTWAAQ EQELESLREQ LEGVNRSIEE ENSBTAP00000042324/1-595 FHLEPEAQAA QVSDVPATSQ RPEQDTWAAQ EQELESLREQ LEGVNHNIEE ENSTTRP00000016089/1-627 XXXEPEAQAA QVSDVPATSR RPEQDTWAAQ EQELESLREQ LEGVNRNIEE BACU009765/1-525 FHLEPEAQAA QVSGVQTTSR RPEQDMWAAQ EQELESLREQ LEGVNRSIEE bmy_16651T0/1-713 FHLEPEAQAA QVSDVPATSR RPEQDTWAAQ EQELESLREQ LEGVNRSIEE 351 400 ENSP00000365401/1-627 VEADMKTLGV SFVQAESECR HSKLSTAERE QALRLKSRAV ELLPDGTANL ENSBTAP00000042324/1-595 VEANMKTLGI NLVQVETECR QSELSIVERE QALRLKSQAV ELLPDGAANL ENSTTRP00000016089/1-627 VEANMKTLGI SLVQVETECR QSKLSTAEHE QALRLKSRAV ELLPDGAANL BACU009765/1-525 VEANMKTLGI SLVQVETECR QSKLSTAEHE QALRLKSRAV ELLPDGAANL bmy_16651T0/1-713 VEANMKTLGI SLVQVETECR QSKLSTAEHE QALRLKSRAV ELLPDGAANL 401 450 ENSP00000365401/1-627 AKLQLVVENS AQRVIHLAGQ WEKHRVPLLA EYRHLRKLQD CRELESSRRL ENSBTAP00000042324/1-595 AKLQLVVESS AQRVIHLAGQ WEKHRVPLLA EYRHLRKLQD CRELESSRRL ENSTTRP00000016089/1-627 AKLQLVVESS AQRVIHLAGQ WEKHRVPLLA EYRHLRKLQD CRELESSRRL BACU009765/1-525 AKLQLVVESS AQRVIHLAGQ WEKHRVPLLA EYRHLRKLQD CRE------- bmy_16651T0/1-713 AKLQLVVESS AQRVIHLAGQ WEKHRVPLLA EYRHLRKLQD CRELESSRRL 451 500 ENSP00000365401/1-627 AEIQELHQSV RAAAEEARRK EEVYKQLMSE LETLPRDVSR LAYTQRILEI ENSBTAP00000042324/1-595 AEIQELHQSV RAAAEEARRK EEVYKQLVSE LETLPKDVSR LAYTQRILEI ENSTTRP00000016089/1-627 AEIQELHQSV RAAAEEARRK EDVYKQLMSE LETLPRDVSR LAYTQRILEI BACU009765/1-525 ---------- ---------- ---------- ---------- ---------- bmy_16651T0/1-713 AEIQELHQSV RAAAEEARRK EDVYKQLMSE LETLPRDVSR LAYTQRILEI 501 550 ENSP00000365401/1-627 VGNIRKQKEE ITK------- ---------- ---------- ---------- ENSBTAP00000042324/1-595 VGNIRKQKEE ITK------- ---------- ---------- ---------- ENSTTRP00000016089/1-627 VGNIRKQKEE ITK------- ---------- ---------- ---------- BACU009765/1-525 ---------- ---------- ---------- ---------- ---------- bmy_16651T0/1-713 VGNIRKQKEE ITKVRYRGRG GWVIRVDTPK GRMCVAGLHR DLTPSESQSY 551 600 ENSP00000365401/1-627 ---------- ---------- ---------- ---------- ---------I ENSBTAP00000042324/1-595 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016089/1-627 ---------- ---------- ---------- ---------- ---------I BACU009765/1-525 ---------- ---------- ---------- ---------- ---------- bmy_16651T0/1-713 LAIPRHGTVP HSPLQPPLTL SGWDSINVNA LSWLAARPRR AHGYPGLCQI 601 650 ENSP00000365401/1-627 LSDTKELQKE INSLSGKLDR TFAVTDELVF KDAKKDDAVR KAYKYLAALH ENSBTAP00000042324/1-595 ---------- ---------- ---------- -DAKKDDAVR KAYKYLAALH ENSTTRP00000016089/1-627 LSDTKELQKE INSLSGKLDR TFAVTDELVF KDAKKDDAVR KAYKYLAALH BACU009765/1-525 ---------- ---------- ---------- -DAKKDDAVR KAYKYLAALH bmy_16651T0/1-713 LSDTKELQKE INSLSGKLDR TFAVTDELVF KDAKKDDAVR KAYKYLAALH 651 700 ENSP00000365401/1-627 ENCSQLIQTI EDTGTIMREV RDLEEQIETE LGKKTLSNLE KIREDYRALR ENSBTAP00000042324/1-595 ENCSQLIQTI EDTGTIMREV RDLEEQIETE MGKKTLSNLD KIREDYRALR ENSTTRP00000016089/1-627 ENCSQLIQTI EDTGTIMREV RDLEEQIETE MGKKTLSNLE KIREDYRALR BACU009765/1-525 ESCSQLIQTI EDTGTILREV RDLEEQIETE MGKKKLSNLE KIREDYRALR bmy_16651T0/1-713 ENCSQLIQTI EDTGTILREV RDLEEQIETE MGKKTLSNLE KIREDYRALR 701 750 ENSP00000365401/1-627 QENAGLLGRV REA ENSBTAP00000042324/1-595 QENAGLLGRV REA ENSTTRP00000016089/1-627 QENAGLLGRV REA BACU009765/1-525 QENAGLLGRV REA bmy_16651T0/1-713 QENAGLLGRV REA