KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:24 2014 Check: 00 .. Name: ENSP00000319591/1-655 Len: 655 Check: 9519 Weight: 1.00 Name: BACU002704/1-465 Len: 655 Check: 7618 Weight: 1.00 Name: ENSTTRP00000004829/1-655 Len: 655 Check: 6293 Weight: 1.00 Name: ENSBTAP00000042331/1-655 Len: 655 Check: 9559 Weight: 1.00 Name: bmy_22100T0/1-350 Len: 655 Check: 3319 Weight: 1.00 // 1 50 ENSP00000319591/1-655 MAAGVAAWLP FARAAAIGWM PVANCPMPLA PADKNKRQDE LIVLNVSGRR BACU002704/1-465 MAAGVAAWLP FARAAAIGWM PVANCPMPLA PADKNKRQDE LIVLNVSGRR ENSTTRP00000004829/1-655 MAAGVAAWLP FARAAAIGWM PVANCPMPLA PADKNKRQDE LIVLNVSGRR ENSBTAP00000042331/1-655 MAAGVAAWLP FARAAAIGWM PVANCPMPLA PADKNKRQDE LIVLNVSGRR bmy_22100T0/1-350 ---------- ---------M PVANCPMPLA PADKNKRQDE LIVLNVSGRR 51 100 ENSP00000319591/1-655 FQTWRTTLER YPDTLLGSTE KEFFFNEDTK EYFFDRDPEV FRCVLNFYRT BACU002704/1-465 FQTWRTTLER YPDTLLGSTE KEFFFNEDTK EYFFDRDPEV FRCVLNFYRT ENSTTRP00000004829/1-655 FQTWRTTLER YPDTLLGSTE KEFFFNEDTK EYFFDRDPEV FRCVLNFYRT ENSBTAP00000042331/1-655 FQTWRTTLER YPDTLLGSTE KEFFFNEDTK EYFFDRDPEV FRCVLNFYRT bmy_22100T0/1-350 FQTWRTTLER YPDTLLGSTE KEFFFNEDTK EYFFDRDPEV FRCVLNFYRT 101 150 ENSP00000319591/1-655 GKLHYPRYEC ISAYDDELAF YGILPEIIGD CCYEEYKDRK RENAERLMDD BACU002704/1-465 GKLHYPRYEC ISAYDDELAF YGILPEIIGD CCYEEYKDRK RENAERLMDD ENSTTRP00000004829/1-655 GKLHYPRYEC ISAYDDELAF YGILPEIIGD CCYEEYKDRK RENAERLMDD ENSBTAP00000042331/1-655 GKLHYPRYEC ISAYDDELAF YGILPEIIGD CCYEEYKDRK RENAERLMDD bmy_22100T0/1-350 GKLHYPRYEC ISAYDDELAF YGILPEIIGD CCYEEYKDRK RENAERLMDD 151 200 ENSP00000319591/1-655 NDSENNQESM PSLSFRQTMW RAFENPHTST LALVFYYVTG FFIAVSVITN BACU002704/1-465 NDSENNQESM PSLSFRQTMW RAFENPHTST LALVFYYVTG FFIAVSVITN ENSTTRP00000004829/1-655 NDSENNQESM PSLSFRQTMW RAFENPHTST LALVFYYVTG FFIAVSVITN ENSBTAP00000042331/1-655 NDSENNQESM PSLSFRQTMW RAFENPHTST LALVFYYVTG FFIAVSVITN bmy_22100T0/1-350 NDSENNQESM PSLSFRQTMW RAFENPHTST LALVFYYVTG FFIAVSVITN 201 250 ENSP00000319591/1-655 VVETVPCGTV PGSKELPCGE RYSVAFFCLD TACVMIFTVE YLLRLFAAPS BACU002704/1-465 VVETVPCGTV PGSKELPCGE RYSVAFFCLD TACVMIFTVE YLLRLFAAPS ENSTTRP00000004829/1-655 VVETVPCGTV PGSKELPCGE RYSVAFFCLD TACVMIFTVE YLLRLFAAPS ENSBTAP00000042331/1-655 VVETVPCGTV PGSKELPCGE RYSVAFFCLD TACVMIFTVE YLLRLFAAPS bmy_22100T0/1-350 VVETVPCGTV PGSKELPCGE RYSVAFFCLD TACVMIFTVE YLLRLFAAPS 251 300 ENSP00000319591/1-655 RYRFIRSVMS IIDVVAIMPY YIGLVMTNNE DVSGAFVTLR VFRVFRIFKF BACU002704/1-465 RYRFIRSVMS IIDVVAIMPY YIGLVMTNNE DVSGAFVTLR VFRVFRIFKF ENSTTRP00000004829/1-655 RYRFIRSVMS IIDVVAIMPY YIGLVMTNNE DVSGAFVTLR VFRVFRIFKF ENSBTAP00000042331/1-655 RYRFIRSVMS IIDVVAIMPY YIGLVMTNNE DVSGAFVTLR VFRVFRIFKF bmy_22100T0/1-350 RYRFIRSVMS IIDVVAIMPY YIGLVMTNNE DVSGAFVTLR VFRVFRIFKF 301 350 ENSP00000319591/1-655 SRHSQGLRIL GYTLKSCASE LGFLLFSLTM AIIIFATVMF YAEKGSSASK BACU002704/1-465 SRHSQGLRIL GYTLKSCASE LGFLLFSLTM AIIIFATVMF YAEKGSSASK ENSTTRP00000004829/1-655 SRHSQGLRIL GYTLKSCASE LGFLLFSLTM AIIIFATVMF YAEKGSSASK ENSBTAP00000042331/1-655 SRHSQGLRIL GYTLKSCASE LGFLLFSLTM AIIIFATVMF YAEKGSSASK bmy_22100T0/1-350 SRHSQGLRIL GYTLKSCASE LGFLLFSLTM AIIIFATVMF YAEKGSSASK 351 400 ENSP00000319591/1-655 FTSIPASFWY TIVTMTTLGY GDMVPKTIAG KIFGSICSLS GVLVIALPVP BACU002704/1-465 FTSIPASFWY TIVTMTTLG- ---------- ---------- ---------- ENSTTRP00000004829/1-655 FTSIPASFWY TIVTMTTLGY GDMVPKTIAG KIFGSICSLS GVLVIALPVP ENSBTAP00000042331/1-655 FTSIPASFWY TIVTMTTLGY GDMVPKTIAG KIFGSICSLS GVLVIALPVP bmy_22100T0/1-350 FTSIPASFWY TIVTMTTLG- ---------- ---------- ---------- 401 450 ENSP00000319591/1-655 VIVSNFSRIY HQNQRADKRR AQKKARLARI RVAKTGSSNA YLHSKRNGLL BACU002704/1-465 ---------E DEDGRADRRQ GAGPE----- ---------- ---------- ENSTTRP00000004829/1-655 VIVSNFSRIY HQNQRADKRR AQKKARLARI RVAKTGSSNA YLHSKRNGLL ENSBTAP00000042331/1-655 VIVSNFSRIY HQNQRADKRR AQKKARLARI RVAKTGSSNA YLHSKRNGLL bmy_22100T0/1-350 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000319591/1-655 NEALELTGTP EEEHMGKTTS LIESQHHHLL HCLEKTTGLS YLVDDPLLSV BACU002704/1-465 -------GKL GGNGPGLSVF YFVPAAEHLL GTVLAQKMLW FV-------- ENSTTRP00000004829/1-655 NEALELMGTP EEEHMGKTTS LIESQHHHLL HCLEKTTXXX XXXXXXXXXX ENSBTAP00000042331/1-655 NEALELLGTP EEENMGKTTS LIESQHHHLL HCLEKTTGLS YLVDDPLLSV bmy_22100T0/1-350 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000319591/1-655 RTSTIKNHEF IDEQMFEQNC MESSMQNYPS TRSPSLSSHP GLTTTCCSRR BACU002704/1-465 ---------- ---------- ---------- ---------- -----CHSCW ENSTTRP00000004829/1-655 XXXXXXNHEF IDEQMFEQNC MESSMQNYPS TRSPSLSSHP GLTTTCCSRR ENSBTAP00000042331/1-655 RTSTIKNHEF IDEQMFEQNC MESSMQNYPS TRSPSLSSHP GLTTTCCSRR bmy_22100T0/1-350 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000319591/1-655 SKKTTHLPNS NLPATRLRSM QELSTIHIQG SEQPSLTTSR SSLNLKADDG BACU002704/1-465 SLGFTHLPSS G--------- ---------- ---------- ---------- ENSTTRP00000004829/1-655 SKKTTHLPNS NLPATRLRSM QELSTIHIQG SEQPSLTTSR SSLNLKADDG ENSBTAP00000042331/1-655 SKKTTHLPNS NLPATRLRSM QELSTIHIQG SEQPSLTTSR SSLNLKADDG bmy_22100T0/1-350 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000319591/1-655 LRPNCKTSQI TTAIISIPTP PALTPEGESR PPPASPGPNT NIPSIASNVV BACU002704/1-465 ---------- ---------- ---QGENTDI PTPTGPRKQE SIITMYSNFE ENSTTRP00000004829/1-655 LRPNCKTSQI TTAIISIPTP PALTPEGEGR PPPASPGSNT NIPAMASNVV ENSBTAP00000042331/1-655 LRPNCKTSQI TTAIISIPTP PALTPEGESR PPPASPGPNT NIPSIASNVV bmy_22100T0/1-350 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000319591/1-655 KVSAL BACU002704/1-465 NN--- ENSTTRP00000004829/1-655 KVSAL ENSBTAP00000042331/1-655 KVSAL bmy_22100T0/1-350 -----