KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:25 2014 Check: 00 .. Name: ENSP00000300145/1-246 Len: 257 Check: 4383 Weight: 1.00 Name: ENSBTAP00000042356/1-257 Len: 257 Check: 1740 Weight: 1.00 Name: bmy_03861T0/1-173 Len: 257 Check: 6979 Weight: 1.00 Name: ENSTTRP00000014781/1-246 Len: 257 Check: 4015 Weight: 1.00 Name: BACU008171/1-246 Len: 257 Check: 4178 Weight: 1.00 // 1 50 ENSP00000300145/1-246 ---------- -MAGAPDERR RGPAAGEQLQ QQHVSCQVFP ERLAQGNPQQ ENSBTAP00000042356/1-257 EEEAAAKSVG GMAEAPDERE PGSVAGEQLQ QQHVGCQVFS ERLAQGKPQQ bmy_03861T0/1-173 ---------- -MV------- ---------- ---------- -------PQ- ENSTTRP00000014781/1-246 ---------- -MAGAPDERG PGPAAGEQLQ QQHVGCQVFP ERLAQGKPQQ BACU008171/1-246 ---------- -MAGAPGERG PGPAAGEQLQ QQHVGCQVFP ERLAQGKPQQ 51 100 ENSP00000300145/1-246 GFFSSFFTSN QKCQLRLLKT LETNPYVKLL LDAMKHSGCA VNKDRHFSCE ENSBTAP00000042356/1-257 GFLSSFFTNN QKCQLMLLKT LATNPYVKLL LDAMKHSGCA VNKDRHFSCE bmy_03861T0/1-173 ---------- ---------- LVPDPYVKLL LDAMKHSGC- ---------- ENSTTRP00000014781/1-246 GFLSSFFTNN QKCQLMLLQT LETNPYVKLL LDAMKHSGCA VNRERHFSCE BACU008171/1-246 GFLSSFFTNN QKCQLMLLQT LETNPYVKLL LDAMKHSGCA VNKERHFSCE 101 150 ENSP00000300145/1-246 DCNGNVSGGF DASTSQIVLC QNNIHNQAHM NRVVTHELIH AFDHCRAHVD ENSBTAP00000042356/1-257 DCNGNVSGGF DSSVSQIVLC QNNIRNQAHM NRVVTHELIH AFDHCRAHVN bmy_03861T0/1-173 -------GGF DASVSQIVLC QNNICNQAHM NRVVTHELIH AFDHCRAHVD ENSTTRP00000014781/1-246 DCNGNVSGGF DASVSQIVLC QNNICNQAHM NRVVTHELIH AFDHCRAHVD BACU008171/1-246 DCNGNVSGGF DASVSQIVLC QNNICNQAHM NRVVTHELIH AFDHCRAHVD 151 200 ENSP00000300145/1-246 WFTNIRHLAC SEVRAANLSG DCSLVNEIFR LHFGLKQHHQ TCVRDRATLS ENSBTAP00000042356/1-257 WFTNVRHLAC SEVRAANLSG DCSFLNEIFR LHFGLKQHHQ TCVRDRAIRS bmy_03861T0/1-173 WFTDVRHLAC SEVRAANLSG DCSLLNEILR LHFGLKQHHQ TCVRDRAIRS ENSTTRP00000014781/1-246 WFTNVRHLAC SEVRAANLSG DCSLLNEIFR LHFGLKRHHQ TCVRDRAIRS BACU008171/1-246 WFTNVRHLAC SEVRAANLSG DCSLLNEILR LHFGLKQHHQ TCVRDRAIRS 201 250 ENSP00000300145/1-246 ILAVRNISKE VAKKAVDEVF ESCFNDHEPF GRIPHNKTYA RYAHRDFENR ENSBTAP00000042356/1-257 ILAVRNINKE VAQKAVDEVF ESCFNDHEPF GRIPHNKTYA RYAHRDFQNR bmy_03861T0/1-173 ILAVRNISKE VAQKAVDEVF ESCFNDHEPF GRIPHNKTYA RYAHRDFQNR ENSTTRP00000014781/1-246 ILAVRNISKE VAQKAVDEVF ESCFNDHEPF GRIPHNKTYA RYAHRDFQNR BACU008171/1-246 ILAVRNISKE VAQKAVDEVF ESCFNDHEPF GRIPHNKTYA RYAHRDFQNR 251 300 ENSP00000300145/1-246 DRYYSNI ENSBTAP00000042356/1-257 DRYYSNI bmy_03861T0/1-173 DRYYSNI ENSTTRP00000014781/1-246 DRYYSNI BACU008171/1-246 DRYYSNI