KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:53:26 2014 Check: 00 .. Name: ENSP00000292894/1-274 Len: 274 Check: 3339 Weight: 1.00 Name: ENSBTAP00000042383/1-257 Len: 274 Check: 6832 Weight: 1.00 Name: bmy_05917T0/1-228 Len: 274 Check: 8944 Weight: 1.00 Name: ENSTTRP00000003686/1-272 Len: 274 Check: 4337 Weight: 1.00 // 1 50 ENSP00000292894/1-274 MPKYCRAPNC SNTAGRLGAD NRPVSFYKFP LKDGPRLQAW LQHMGCEHWV ENSBTAP00000042383/1-257 MPKYCLAPNC SNTAGQLGAD NRPVSFYKFP LKDGPRLQAW LRHMGREHWV bmy_05917T0/1-228 MPKYCRAPNC SNNAGQLGAD NRPVSFYKLP LKDGPRLQAW LRHMGREHWV ENSTTRP00000003686/1-272 MPKYCRAPNC SNNAGQLGAD NRPVSFYKFP LKDGPRLQAW LRHMGCEHWV 51 100 ENSP00000292894/1-274 PSCHQHLCSE HFTPSCFQWR WGVRYLRPDA VPSIFSRGPP AKSQRRTRST ENSBTAP00000042383/1-257 PSCHQHLCSE HFAPSCFQWR WGVRYLRPDA VPSIFSRVPP AQRQQSSRST bmy_05917T0/1-228 PSCHQHLCSE HFAPSCFQWR WGVRYLRPDA VPSIFSRAPP AKRQTNSRST ENSTTRP00000003686/1-272 PSCHQHLCSE HFSPSCFQWR WGVRYLRLDA VPSIFSGAPP DNRQTNSRST 101 150 ENSP00000292894/1-274 QKPVSPPPPL QKNTPLPQSP AIPVSGPVRL VVLGPTSGSP KTVATMLLTP ENSBTAP00000042383/1-257 EKPVVPPP-- -----LQATP SL-ASGPVQL LVLGPASGAP EAPATVFLTP bmy_05917T0/1-228 EKPVVPPPP- QEATSLSPGP AVPAPGPVQL VVLGPASGGP EAPATVFLTP ENSTTRP00000003686/1-272 EKPVVPPTP- QEATSLSPGP AVPAPGPVQL VVLGPASGGP EVPATVFLTP 151 200 ENSP00000292894/1-274 LAPAPTPERS QPEVPAQQAQ TGLGPVLGAL QRRVRRLQRC QERHQAQLQA ENSBTAP00000042383/1-257 LSLQPAPAGP RPGASAQHPR AGLGAALGAL QRRVRRLQRR HERHQARLRA bmy_05917T0/1-228 LPLPPVPTGP RPGVSAQHPR PGLGAALGAL QRR------- ---------- ENSTTRP00000003686/1-272 LPLPPVPTGP RPGVSAQHPW PGLGAALGAL QRRVRRLQRR HERHQARLRA 201 250 ENSP00000292894/1-274 LERLAQQLHG ESLLARARRG LQRLTTAQTL GPEESQTFTI ICGGPDIAMV ENSBTAP00000042383/1-257 LEQLARQLQ- ----ARAHWG RL----CALP RPEESQAFTI ICGGPDIAVV bmy_05917T0/1-228 ---------- ---------- --------LP GPEESQAFTI ICGGPDIAAV ENSTTRP00000003686/1-272 LEQLAKQLRA ESLLAPAHRG RLR-AMAQLP GPEESQAFTI ICGGPDIAVV 251 300 ENSP00000292894/1-274 LAQDPAPATV DAKPELLDTR IPSA ENSBTAP00000042383/1-257 LAHGPASPTL DAKPELLDTQ TPGA bmy_05917T0/1-228 LAQGPAPPTL DAKPELLDTQ TPSA ENSTTRP00000003686/1-272 LAQGPAPPTL DAKPELLDTQ TPSA