KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:26 2014 Check: 00 .. Name: ENSP00000357535/1-290 Len: 322 Check: 9352 Weight: 1.00 Name: ENSBTAP00000042386/1-290 Len: 322 Check: 1353 Weight: 1.00 Name: ENSTTRP00000014992/1-290 Len: 322 Check: 526 Weight: 1.00 Name: bmy_20711T0/1-322 Len: 322 Check: 5112 Weight: 1.00 Name: BACU004800/1-290 Len: 322 Check: 1284 Weight: 1.00 // 1 50 ENSP00000357535/1-290 ---------- ---------- ---------- --MAALRVLL SCVRGPLRPP ENSBTAP00000042386/1-290 ---------- ---------- ---------- --MAALRALL PRVRAPLRPW ENSTTRP00000014992/1-290 ---------- ---------- ---------- --MAALRALQ PSVRVLLCTW bmy_20711T0/1-322 WPVGGAGPDW RGRGAAPRRG GPAGATCRHA RAMAALRALQ PSVRALLGTW BACU004800/1-290 ---------- ---------- ---------- --MAALRVLQ PSVRALLGTW 51 100 ENSP00000357535/1-290 VRCPAWRPFA SGANFEYIIA EKRGKNNTVG LIQLNRPKAL NALCDGLIDE ENSBTAP00000042386/1-290 LFCPVQRSFA SSAAFEYIIT AKKGRNSNVG LIQLNRPKAL NALCNGLIVE ENSTTRP00000014992/1-290 PGCPAPRSFA SSAASEYIIT AKKGKNSNVG LVQLNRPKAL NALCDGLIME bmy_20711T0/1-322 PGCPAPRSFA SSAAFEYIIT AKKGKNSNVG LVQLNRPKAL NALCDGLIVE BACU004800/1-290 PGCPAPRSFA SSAAFEYIIT AKKGKNSNVG LVQLNRPKAL NALCDGLIEE 101 150 ENSP00000357535/1-290 LNQALKTFEE DPAVGAIVLT GGDKAFAAGA DIKEMQNLSF QDCYSSKFLK ENSBTAP00000042386/1-290 LNQALQAFEE DPAVGAIVLT GGEKVFAAGA DIKEMQSLTF QNCYSGGFLS ENSTTRP00000014992/1-290 LNQALQAFEE DPAVGAIVLT GGEKAFAAGA DIKEMQNLTF QDCYSSKFLS bmy_20711T0/1-322 LNQALQAFEE DPAVGAIVLT GGEKAFAAGA DIKEMQNLTF QDCYSSKFLS BACU004800/1-290 LNQALQAFEE DPAVGAIVLT GGEKAFAAGA DIKEMQNLTF QDCYSSKFLS 151 200 ENSP00000357535/1-290 HWDHLTQVKK PVIAAVNGYA FGGGCELAMM CDIIYAGEKA QFAQPEILIG ENSBTAP00000042386/1-290 HWDQLTRVKK PVIAAVNGYA LGGGCELAMM CDIIYAGEKA QFGQPEILIG ENSTTRP00000014992/1-290 HWDRLSRVKK PVIAAVNGYA LGGGCELAMM CDIIYAGEKA QFGQPEILIG bmy_20711T0/1-322 HWDRLTWVKK PVIAAVNGYA LGGGCELAMM CDIIYAGEKA QFGQPEILIG BACU004800/1-290 HWDRLTWVKK PVIAAVNGYA LGGGCELAMM CDIIYAGEKA QFGQPEILIG 201 250 ENSP00000357535/1-290 TIPGAGGTQR LTRAVGKSLA MEMVLTGDRI SAQDAKQAGL VSKICPVETL ENSBTAP00000042386/1-290 TIPGAGGTQR LTRAVGKSLA MEMVLTGDRI SAQDAKQAGL VSKIFPVETV ENSTTRP00000014992/1-290 TIPGAGGTQR LTRAVGKSLA MEMVLTGDRI SAQDAKQAGL VSKIFPVETL bmy_20711T0/1-322 TIPGAGGTQR LTRAVGKSLA MEMVLTGDRI SAQDAKQAGL VSKIFPVETL BACU004800/1-290 TIPGAGGTQR LTRAVGKSLA MEMVLTGDRI SAQDAKQAGL VSKVLPVETL 251 300 ENSP00000357535/1-290 VEEAIQCAEK IASNSKIVVA MAKESVNAAF EMTLTEGSKL EKKLFYSTFA ENSBTAP00000042386/1-290 VEEAIQCAEK IASNSKIVTA MAKESVNAAF EMTLAEGVKL EKKLFYSTFA ENSTTRP00000014992/1-290 VEEAIKCAEK IASNSKIVAA MAKESVNAAF EMTLTEGVKL EKKLFYSTFA bmy_20711T0/1-322 VEEAVKCAEK IASNSKIVTA MAKESVNAAF EMTLTEGIKL EKKLFYSTFA BACU004800/1-290 VEEAVKCAEK IASNSKIVTA MAKESVNAAF EMTLTEGIKL EKKLFYSTFA 301 350 ENSP00000357535/1-290 TDDRKEGMTA FVEKRKANFK DQ ENSBTAP00000042386/1-290 TEDRKEGMAA FVEKRKANFK DQ ENSTTRP00000014992/1-290 TEDRKEGMSA FVEKRKASFK DQ bmy_20711T0/1-322 TEDRKEGMSA FVEKRKANFK DQ BACU004800/1-290 TEDRKEGMSA FVEKRKANFK DQ