KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:28 2014 Check: 00 .. Name: ENSP00000359376/1-436 Len: 453 Check: 1719 Weight: 1.00 Name: BACU018537/1-414 Len: 453 Check: 6274 Weight: 1.00 Name: ENSBTAP00000042417/1-453 Len: 453 Check: 7982 Weight: 1.00 Name: bmy_16421T0/1-436 Len: 453 Check: 560 Weight: 1.00 Name: ENSTTRP00000001698/1-436 Len: 453 Check: 415 Weight: 1.00 // 1 50 ENSP00000359376/1-436 MQPPPDEARR DMAGDTQWSR PECQAWTGTL LLGTCLLYCA RSSMPICTVS BACU018537/1-414 ---------- ---------R PECQVWTGAL LLGTCLLYCA RASMPVCAAT ENSBTAP00000042417/1-453 MQPPPDETRR DAAEDTQWSR PECQVWTGTL LLGTCLLYCA RVSMPVCAAS bmy_16421T0/1-436 MQPAPDEARR DAAEDAQWSR PECQVWTGTL LLGTCLLYCA RTSMPVCAAT ENSTTRP00000001698/1-436 MQPLPDEARR EAAEDAQWSR PECQVWTGTL LLGTCLLYCA RVSMPVCAAA 51 100 ENSP00000359376/1-436 MSQDFGWNKK EAGIVLSSFF WGYCLTQVVG GHLGDRIGGE KVILLSASAW BACU018537/1-414 MSQDFGWNKK EAGVVLSSFF WGYCLTQVVG GHLGDRIGGE KVILLSASAW ENSBTAP00000042417/1-453 MSQDFGWNKK EAGVVLSSFF WGYCLTQVVG GHLGDRIGGE KVILLSASAW bmy_16421T0/1-436 MSQDFGWNKK EAGVVLSSFF WGYCLTQVVG GHLGDRIGGE KVILLSASAW ENSTTRP00000001698/1-436 MSQDFGWNKK EAGVVLSSFF WGYCLTQVVG GHLGDRIGGE KVILLSASAW 101 150 ENSP00000359376/1-436 GSITAVTPLL AHLSSAHLAF MTFSRILMGL LQGVYFPALT SLLSQKVRES BACU018537/1-414 GFITAATPLL SHLGSAHLAF MTFSRVLTGL LQGVYFPALT SLLSQKERES ENSBTAP00000042417/1-453 GFITVATPLL AHLGSAHLAF MTFSRILTGL LQGVYFPALT SLLSQKVRES bmy_16421T0/1-436 GFITAATPLL SHLGSAHLAF MTFSRILTGL LQGVYFPALT SLLSQKVRES ENSTTRP00000001698/1-436 GFITAATPLL SRLSSAHLAF MTFSRILTGL LQGVYFPALT SLLSQKVRES 151 200 ENSP00000359376/1-436 ERAFTYSIVG AGSQFGTLLT GAVGSLLLEW YGWQSIFYFS GGLTLLWVWY BACU018537/1-414 ERAFTYSTVG AGSQFGTLVT GAVGSLLLDW YGWPSVFYFS GGLTLLWVCY ENSBTAP00000042417/1-453 ERAFTYSTVG AGSQFGTLVT GAVGSLLLDW YGWPSVFYFS GGLTLLWVGY bmy_16421T0/1-436 ERAFTYSTVG AGSQFGTLVT GAVGSLLLDW YGWPSVFYFS GGLTLLWVCY ENSTTRP00000001698/1-436 ERAFTYSTVG AGSQFGTLVT GAVGSLLLDW YGWPSVFYFS GGLTLLWVCY 201 250 ENSP00000359376/1-436 VYRYLLSEK- ---------- ------DLIL ALGVLAQSRP VSRHNRVPWR BACU018537/1-414 VYRCLLGEK- ---------- ------DLIL ALGVLAQGLP VGLGGVDP-E ENSBTAP00000042417/1-453 VYRCLLSERG PSSHLDGFHV DLPPPSDLIL ALGILAQGLP VSRHTKVPWR bmy_16421T0/1-436 VYRCLLGEK- ---------- ------DLIL ALGVLAQGLP VSRHTKVPWR ENSTTRP00000001698/1-436 VYRCLLGEK- ---------- ------DLIL ALGVLAQGLP VSRHTKVPWR 251 300 ENSP00000359376/1-436 RLFRKPAVWA AVVSQLSAAC SFFILLSWLP TFFEETFPDA KGWIFNVVPW BACU018537/1-414 PGPRPPR--A AIISQLSAAC SFFILLSWLP TFFKETFPGS KGWVFNVVPW ENSBTAP00000042417/1-453 QLFRKPSVWA AIISQLSAAC SFFILLSWLP TFFKETFPSS KGWVFNVVPW bmy_16421T0/1-436 QLFRKPSVWA AIISQLSAAC SFFILLSWLP TFFKETFPSS KGWVFNVVPW ENSTTRP00000001698/1-436 QLFRKPSVWA AIISQLSAAC SFFILLSWLP TFFKETFPSS KGWVFNVVPW 301 350 ENSP00000359376/1-436 LVAIPASLFS GFLSDHLINQ GYRAITVRKL MQGMGLGLSS VFALCLGHTS BACU018537/1-414 LVAIPASLFS GLLSDRLINQ GYRTITVRKF MQVMGLGLSS VFALCLGHTS ENSBTAP00000042417/1-453 LVAIPASLLS GLLSDHLINQ GYRTITVRKF MQVMGLGLSS VFALCLGHTS bmy_16421T0/1-436 LVAIPASLFS GLLSDRLINQ GYRTITVRKF MQVMGLGLSS VFALCLGHTS ENSTTRP00000001698/1-436 LVAIPASLFS GLLSDRLINQ GYRTITVRKF MQAMGLGLSS VFALCLGHTS 351 400 ENSP00000359376/1-436 SFCESVVFAS ASIGLQTFNH SGISVNIQDL APSCAGFLFG VANTAGALAG BACU018537/1-414 SFCKSVVFAS ASIGLQTFNH SGISVNIQDL APSCAGFLFG VANTAGALAG ENSBTAP00000042417/1-453 SFCNSVVFAS ASIGLQTFNH SGISVNIQDL APSCAGFLFG VANTAGALAG bmy_16421T0/1-436 SFCKSVVFAS ASIGLQTFNH SGISVNIQDL APSCAGFLFG VANTAGALAG ENSTTRP00000001698/1-436 SFCKSVVFAS ASIGLQTFNH SGISVNIQDL APSCAGFLFG VANTAGALAG 401 450 ENSP00000359376/1-436 VVGVCLGGYL METTGSWTCL FNLVAIISNL GLCTFLVFGQ AQRVDLSSTH BACU018537/1-414 VVGVCLGGYL IETTGSWTSV FNLAAAISSL GLCTFLVLGK AQRVDLSPTH ENSBTAP00000042417/1-453 VVGVCLGGYL IETTGSWTSV FNLVAAISSL GLCTFLVFGK AQRVDLSPAH bmy_16421T0/1-436 VVGVCLGGYL IETTGSWTSV FNLVAAISSL GLCTFLVFGK AQRVDLSPAH ENSTTRP00000001698/1-436 VVGVCLGGYL IETTGSWTSV FDLVAAVSSL GLCTFLVFGK AQRVDLSPAH 451 500 ENSP00000359376/1-436 EDL BACU018537/1-414 EDL ENSBTAP00000042417/1-453 EDL bmy_16421T0/1-436 EDL ENSTTRP00000001698/1-436 EDL