KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:53:29 2014 Check: 00 .. Name: ENSP00000315554/1-309 Len: 337 Check: 2893 Weight: 1.00 Name: ENSBTAP00000042433/1-313 Len: 337 Check: 9508 Weight: 1.00 Name: bmy_01749T0/1-331 Len: 337 Check: 2379 Weight: 1.00 Name: BACU019624/1-305 Len: 337 Check: 6183 Weight: 1.00 // 1 50 ENSP00000315554/1-309 MAMVERPRPE WASYHNCNSN SCQDLGNSVL LLLGLIICIN ISINIVTLLW ENSBTAP00000042433/1-313 MAMAERPRPG WASYHNPNTN SCQDLGNSIL LLLGLIICIN IGINMVTLLW bmy_01749T0/1-331 MAMAERPRPG WASYHSPSTN NCQDLGNSIL LLLGLIICVN IGINMVTLVR BACU019624/1-305 MAMAEQPRPE WALCHSPSTN NCQDLGNSIL LLLGLIICVN FGINTVTLVW 51 100 ENSP00000315554/1-309 SRFRG----- ---------- -----VLYQV FHDTICEK-- EAPKSSLLRK ENSBTAP00000042433/1-313 RRLRG----- ---------- -----FLHQV FR-VICEK-- EASKLRSPGK bmy_01749T0/1-331 VGLGGRVLAG WLGGRLGGRG LPGVTVSQAP HQPLTCPRST EASKLCSPGK BACU019624/1-305 HGFRG----- ---------- -----FLHHE FR-IICEK-- EASKLCSPGK 101 150 ENSP00000315554/1-309 QTQPPKKQSS PAVHLRCTMD PVMMTVSPPP AHRHRRRGSP TRCAHCPVAW ENSBTAP00000042433/1-313 QTQPS-KHSS PAVHLRCTMD AVKMTVTPPP TRRRHRRGSS SRRARRPVAW bmy_01749T0/1-331 QTQPP-KQSA PAVRLRCTMD PVKMTVSPPP TRRRRRRGSS ACRAHXPVAW BACU019624/1-305 QTQPP-KQSA PAVRLRCTMD PVKMTVSPPP TRRRRRRDSS ACRAHRPTAW 151 200 ENSP00000315554/1-309 APDT----DD EKPHQYPAIC SYHWDVPEDW EGFQHTQGTW VPWSQDAPES ENSBTAP00000042433/1-313 APDTDDDDDE KPPHQHTAAC SHNWDYPEDW EGLQTAQRFW TPWAQDTLEP bmy_01749T0/1-331 APDT-DSDDE KPPRQHTTIC SHNWDCPRDW EGFQSTQGFW TPWAQDAVEP BACU019624/1-305 APDT-DSDDE KPPRQQTTIC SHNWDCPRDW EGLQSTQRFW TPWAQDAVEP 201 250 ENSP00000315554/1-309 PPQTIRFQPT VEERPLKTGI WSELGLRAYV YPVNPPPPSP EAPSHKNGGE ENSBTAP00000042433/1-313 PTQTIRFQQT IEGRPLKREM QSDLGLEAYV YPVNPPLPSP QILSHKNSGG bmy_01749T0/1-331 PTQTIRFQQT VEGRPLKREM QSELGLEAYV YPVNPPPHSP QALSHKNSGG BACU019624/1-305 PTQTIRFQQT VEGRPLKREM QSELGLEAYV YPVNPPPHSP QALSHRNSGG 251 300 ENSP00000315554/1-309 --GAVPEAEA AQYQPVPAPT LGPAVIPEFS RHRSSGRIVY DARDMRRRLR ENSBTAP00000042433/1-313 GAGAGAQAEQ EQCAPAEPPI LGPANVPDIP RRRSSGRVTY DARDVRRRLR bmy_01749T0/1-331 ----GPQAEQ EQCSPAQPPI LGPAHVPDIP RRHSSGRVAY NARDVRRRLR BACU019624/1-305 ----GPQAEQ GQCSPA---I LGPAHVPDIP RRHSSGRIAY NARDLRRRLR 301 350 ENSP00000315554/1-309 ELTREVEALS GCYPLASGSS TAEETSKNWV YRSLTGR ENSBTAP00000042433/1-313 ELTREVEALS HCYPLASGSS TAEGTRKDWV YRSLTER bmy_01749T0/1-331 ELTREVEALS HCYPPVSGSS TAEGTGKAWV YRSLTER BACU019624/1-305 ELTRELEALS HCYPLVSGSS TAEGTGKAWV YRSLTEK