KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:30 2014 Check: 00 .. Name: ENSP00000342793/1-1074 Len: 1140 Check: 7786 Weight: 1.00 Name: ENSBTAP00000042452/1-1034 Len: 1140 Check: 5961 Weight: 1.00 Name: ENSTTRP00000004926/1-1074 Len: 1140 Check: 298 Weight: 1.00 Name: bmy_17773T0/1-740 Len: 1140 Check: 9218 Weight: 1.00 Name: BACU017817/1-1013 Len: 1140 Check: 8044 Weight: 1.00 // 1 50 ENSP00000342793/1-1074 ---------- ---------- ---------- -----MSLKN EPRVNTSALQ ENSBTAP00000042452/1-1034 ---------- ---------- ---------- -----MSLKN EPRVNTSALQ ENSTTRP00000004926/1-1074 ---------- ---------- ---------- -----MSLKD EPRVNTSALQ bmy_17773T0/1-740 VAANGIIXFF FLFDQNNKSS NPFLLSFAFT LSQANMSLKD EPRLNTSALQ BACU017817/1-1013 ---------- ---------- ---------- -----MSLKK EPRVNTSALQ 51 100 ENSP00000342793/1-1074 KIAADMSNII ENLDTRELHF EGEEVDYDVS PSDPKIQEVY IPFSAIYNTQ ENSBTAP00000042452/1-1034 KIAADMSNLI ENLDTRELHF EGEEVDCDVS PSDPRTQEVY IPFSAVYKTQ ENSTTRP00000004926/1-1074 KIAADMSNLI ENLDTRELHF EGEEVDYEVS PSDPRIREVY IPFSAIYKTQ bmy_17773T0/1-740 KIAADMSNLI ENLDTRELHF EGEEVDYDVS PSDPRIQEVY IPFSAIYKTQ BACU017817/1-1013 KIAADMSNLI ENLDTRELHF EGEEVDYDVS PSDPRIQEVY IPFSAVYKTQ 101 150 ENSP00000342793/1-1074 GFKEPNIQTY LSGCPIKAQV LEVERFTSTT RVPSINLYTI ELTHGEFKWQ ENSBTAP00000042452/1-1034 GFKEPNIQTY LSGCPIKVQV LEVERFTSTK RVPSINLYTI ELTHGEFTWQ ENSTTRP00000004926/1-1074 GFKEPNTQTY LSGCPIKVQV LEVERLTSTK RVPSINLYTI ELTHGEFKWQ bmy_17773T0/1-740 GFKEPNTQTY LSGCPIKVQV LEVERLTSTK RVPSINLYTI ELTHGEFKWQ BACU017817/1-1013 GFKEPNTQTY LSGCPIKVQV LEVERLTSTK RVPSINLYTI ELTHGEFKWQ 151 200 ENSP00000342793/1-1074 VKRKFKHFQE FHRELLKYKA FIRIPIPTRR HTFRRQNVRE EPREMPSLPR ENSBTAP00000042452/1-1034 VKRKFKHFQE FHRELLKYKA FIRIPIPTRR HTFRRQNVKE EPREMPALPR ENSTTRP00000004926/1-1074 VKRKFKHFQE FHRELLKYKA FIRIPIPTKR HTFRRQNVKE EPREMPSLPR bmy_17773T0/1-740 VKRKFKHFQE FHRELLKYKA FIRIPIPTRR HTFRRQNVKE EPREMPSLPR BACU017817/1-1013 VKRKFKHFQE FHRELLKYKA FIRIPIPTRR HTFRRQNVKE EPREMPSLPR 201 250 ENSP00000342793/1-1074 SSENMI-REE QFLGRRKQLE DYLTKILKMP MYRNYHATTE FLDISQLSFI ENSBTAP00000042452/1-1034 TSENMIQQEE QFFSRRKQLE DYLTKLLKMP MYRNYHATTE FLDISQLSFI ENSTTRP00000004926/1-1074 SSENMI-REE QLFGRRKQLE DYLTKLLKMP MYRNYHATTE FLDISQLSFI bmy_17773T0/1-740 SSENTI-QEE QFFGRRKQLE DYLTKLLKMP MYRNYHATAE FLDISQLSFI BACU017817/1-1013 SSENMI-QEE QFFGRR---- ---------- --------AE FLDISQLSFI 251 300 ENSP00000342793/1-1074 HDLGPKGIEG MIMKRSGGHR IPGLNCCGQG RACYRWSKRW LIVKDSFLLY ENSBTAP00000042452/1-1034 HDLGPKGIEG MIMKRSGGHR IPGLNCCGQG RACYRWAKRW LIVKDSFLLY ENSTTRP00000004926/1-1074 HDLGPKGIEG MIMKRSGGHR IPGLNCCGQG RACYRWSKRW LIVKDSFLLY bmy_17773T0/1-740 HDLGPKGIEG MIMKRSGGHR IPGLNCCGQG RACYRWSKRW LIVKDSFLLY BACU017817/1-1013 HDLGPKGM-- ---------- ---------- ---------W LIVKDSFLLY 301 350 ENSP00000342793/1-1074 MKPDSGAIAF VLLVDKEFKI KVGKKETETK YGIRIDNLSR TLILKCNSYR ENSBTAP00000042452/1-1034 MKPDSGAIAF VLLVDKEFRV KVGRKETETK YGLRIDNLSR TLILKCNSYR ENSTTRP00000004926/1-1074 MKPDSGAIAF VLLVDKEFRV KVGKKETETK YGLRIDNLSR TLILKCNSYR bmy_17773T0/1-740 MKPDSGAIAF VLLVDKEFRV KVGKKETETK YGLRIDNLSR TLILKCNSYR BACU017817/1-1013 VKPDSGAIAF VLLVDKEFRV KVGKKETETK YGLRIDNLSR TLILKCNSYR 351 400 ENSP00000342793/1-1074 HARWWGGAIE EFIQKHGTNF LKDHRFGSYA AIQENALAKW YVNAKGYFED ENSBTAP00000042452/1-1034 HARWWGGAIE EFIQKYGPDF LRDHRFGSYA AIQGNTLAKW YVNAKGYFED ENSTTRP00000004926/1-1074 HARWWGGAIE EFIHKHGPNF LKDHRFGSYA AIQENTLAKW YVNAKGYFED bmy_17773T0/1-740 HARWWGGAIE EFIHKHGPNF LKDHRFGSYA AIQENTLAKW YVNAKGYFED BACU017817/1-1013 HARWWGGAIE EFIHKHGPNF LKDHRFGSYA AIQENTLAKW YVNAKGYFED 401 450 ENSP00000342793/1-1074 VANAMEEANE EIFITDWWLS PEIFLKRPVV EGNRWRLDCI LKRKAQQGVR ENSBTAP00000042452/1-1034 VANAMEEAKE EIFITDWWLS PEIFLKRPVV EGNRWRLDCI LKRKA--GVR ENSTTRP00000004926/1-1074 VANAMEEAKE EIFITDWWLS PEIFLKRPVV EGNRWRLDCI LKRKAQQGVR bmy_17773T0/1-740 VANAMEEAKE EIFITDWWLS PEIFLKRPVV EGNRWRLDCI LKRKAQQGVR BACU017817/1-1013 VANAMEEAKE EIFITDWWLS PEIFLKRPVV EGNRWRLDCI LKRKAQQGVR 451 500 ENSP00000342793/1-1074 IFIMLYKEVE LALGINSEYT KRTLMRLHPN IKVMRHPDHV SSTVYLWAHH ENSBTAP00000042452/1-1034 IFIMLYKEVE LALGINSEYS KRTLMRLHPN IKVMRHPDHV SSSVYLWAHH ENSTTRP00000004926/1-1074 IFIMLYKEVE LALGINSEYS KRTLMHLHPN IKVMRHPDHV SSSVYLWAHH bmy_17773T0/1-740 IFIMLYKEVE LALGINSEYS KRTLVHLHPN IKVMRHPDHV SSSVYLWAHH BACU017817/1-1013 IFIMLYKEVE LALGINSEYS KRTLMHLHPN IKVMRHPDHV SSSVYLWAHH 501 550 ENSP00000342793/1-1074 EKLVIIDQSV AFVGGIDLAY GRWDDNEHRL TDVGSVKRVT SGPSLGSLPP ENSBTAP00000042452/1-1034 EKLVIIDQSV AFVGGIDLAY GRWDDNEHRL TDVGSVKRVV GGPSLGSLTA ENSTTRP00000004926/1-1074 EKLIIIDQSV AFVGGIDLAY GRWDDNEHRL TDVGSVKRVI GAPSLVSLTA bmy_17773T0/1-740 EKLIIIDQSM AFVGGIDLAY GRWDDNEHRL TDVGSVTRVT GGPSLGSLTA BACU017817/1-1013 EKLIIIDQSM AFVGGIDLAY GRWDDNEHRL TDVGSVKRVT GGPSLGSLTA 551 600 ENSP00000342793/1-1074 AAMESMESLR LKDKNEPVQN LPIQKSIDDV DSKLKGIGKP RKFSKFSLYK ENSBTAP00000042452/1-1034 ETTESMESLC LRDKNESDKD LPILNSPDDA NSKPKG-KKP SKFSKFSLYR ENSTTRP00000004926/1-1074 ETTESMESLC LKDKNESNKN LPALKTVDDA DSKLKGIGRP RKFSRFSLYR bmy_17773T0/1-740 ETTETMESLS LKDKNESNKN LPVLKTVDDA DSKLKGIGKP RKFSKFSLYR BACU017817/1-1013 ETTESMESLS LKDKNESNKN LPVLKTVDDA DSKLKGIGKP RKFSKFSLYR 601 650 ENSP00000342793/1-1074 QLHRHHLHDA DSISSIDSTS SYFNHYRSHH NLIHGLKPHF KLFHPSSESE ENSBTAP00000042452/1-1034 QLHRHHLHDT DSISSIDSAS ---------- ---------- ---------- ENSTTRP00000004926/1-1074 QLHRHHLRST DSISSIDSAS SDYNHCRSRQ NLIHGLKPHL KFFRSSSESE bmy_17773T0/1-740 QLHRHHLRST DSISSLDSAS ---------- ---------- ---------- BACU017817/1-1013 QLHRHHLRST DSISSLDSAS ---------- ---------- ---------- 651 700 ENSP00000342793/1-1074 QGLTRPHADT GSIRSLQTGV GELHGETRFW HGKDYCNFVF KDWVQLDKPF ENSBTAP00000042452/1-1034 --------NT ASLRSVQTRV GELHGETRFW HGKDYCNFVF KDWVQLDKPF ENSTTRP00000004926/1-1074 QGLTRPNVDT GSIQSLQTGV GELHGETRFW HGKDYCNFVF KDWVQLDKPF bmy_17773T0/1-740 --------NT GSIRSLQTGV GELHGETRFW HGKDYCNFVF KDWVQLDKPF BACU017817/1-1013 --------NT GSIRSLQTGV GELHGETRFW HGKDYCNFVF KDWVQLDKPF 701 750 ENSP00000342793/1-1074 ADFIDRYSTP RMPWHDIASA VHGKAARDVA RHFIQRWNFT KIMKSKYRSL ENSBTAP00000042452/1-1034 ADFIDRHSTP RMPWHDIASA VHGKAARDAA RHFIQRWNFT KIMKPKYRCL ENSTTRP00000004926/1-1074 ADFIDRHSTP RMPWHDIASV VHGKAARDVA RHFIQRWNFT KIMKPKYRSL bmy_17773T0/1-740 ADFIDRHSTP RMPWHDIASA VHGKAARDVA RHFIQRWNFT KIMKPKYRSL BACU017817/1-1013 ADFIDRHSTP RMPWHDISSA VHGKAARDVA RHFIQRWNFT KIMKPKYRSL 751 800 ENSP00000342793/1-1074 SYPFLLPKSQ TTAHELRYQV PGSVHANVQL LRSAADWSAG IKYHEESIHA ENSBTAP00000042452/1-1034 SYPFLLPKSQ TTAHELKYQV PGSVHANVQL LRSAADWSAG IKYHEESIHA ENSTTRP00000004926/1-1074 SYPFLLPKSQ TTAHELKHQV PGSVHANVQL LRSAADWSAG IKYHEESIHA bmy_17773T0/1-740 SYPFLLPKSQ TTAHELKYQV PESVHANVQ- ---------- ---------- BACU017817/1-1013 SYPFLLPKSQ TTAHELKYQV PGSVHANVQL LRSAADWSAG IKYHEESIHA 801 850 ENSP00000342793/1-1074 AYVHVIENSR HYIYIENQFF ISCADDKVVF NKIGDAIAQR ILKAH----- ENSBTAP00000042452/1-1034 AYVYVIENSK HYIYIENQFF ISCSDDRVVF NKIGDAIAQR ILKAH----- ENSTTRP00000004926/1-1074 AYVYVIENSK HYIYIENQFF ISCSDDKVVF NKVGDAIAQR ILKAH----- bmy_17773T0/1-740 ---------- ---------- ---------- ---------- ---------- BACU017817/1-1013 AYIYVIENSK HYIYIENQFF ISCADDKVVF NKVGDAIAQR ILKAHSTLRL 851 900 ENSP00000342793/1-1074 ---------- ---------- -----RENQK YRVYVVIPLL PGFEGDISTG ENSBTAP00000042452/1-1034 ---------- ---------- -----RGSQR YRVYVVIPLL PGFEGDISTG ENSTTRP00000004926/1-1074 ---------- ---------- -----RESQR YRVYVVIPLL PGFEGDISTG bmy_17773T0/1-740 ---------- ---------- ---------- ---------- ---------- BACU017817/1-1013 EGMLRYFLIE HFPVTLGSTG KSDFCRESQR YRVYVVIPLL PGFEGDISTG 901 950 ENSP00000342793/1-1074 GGNALQAIMH FNYRTMCRGE NSILGQLKAE LGNQWINYIS FCGLRTHAEL ENSBTAP00000042452/1-1034 GGNALQAIMH FNYRTMCRGE NSILGQLKAE IGNQWINYIS FCGLRTHAEL ENSTTRP00000004926/1-1074 GGNALQAIMH FNYRTMCRGE NSILGQLKAE IGNQWINYIS FCGLRTHAEL bmy_17773T0/1-740 ---------- ---------- ---------- ---------- ---------- BACU017817/1-1013 GGNALQAIMH FNYRTMCRGE NSILGQLKAE IGNQWINYIS FCGLRTHAEL 951 1000 ENSP00000342793/1-1074 EGNLVTELIY VHSKLLIADD NTVIIGSANI NDRSMLGKRD SEMAVIVQDT ENSBTAP00000042452/1-1034 EGNLVTELIY VHSKLLIADD NTVIIGSANI NDRSMLGKRD SEMAVIVQDT ENSTTRP00000004926/1-1074 EGNLVTELVY VHSKLLIADD NTVIIGSANI NDRSMLGKRD SEMAVIVQDT bmy_17773T0/1-740 ---------- ---------- ---------- ---------- ---------- BACU017817/1-1013 EGNLVTELVY VHSKLLIADD NTVIIGSANI NDRSMLGKRD SEMAVIVQDT 1001 1050 ENSP00000342793/1-1074 ETVPSVMDGK EYQAGRFARG LRLQCFRVVL GYLDDPSEDI QDPVSDKFFK ENSBTAP00000042452/1-1034 ETVPSVMDGK EYQAGRFAQG LRLQCFRVVL GYLSDPSEDI QDPVSDKFFK ENSTTRP00000004926/1-1074 ETVPSVMDGK EYQAGHFALG LRLQCFRVVL GYLSGPSEDI QDPVSDKFFK bmy_17773T0/1-740 ---------- ---------- ---------- ---------- ---------- BACU017817/1-1013 ETVPSVMDGK EYQAGHFALG LRLQCFRVVL GYLSGPSEDI QDPVSDKFFK 1051 1100 ENSP00000342793/1-1074 EVWVSTAARN ATIYDKVFRC LPNDEVHNLI QLRDFINKPV LAKEDPIRAE ENSBTAP00000042452/1-1034 EVWVSTAARN ATIYDKVFRC LPNDEVHNLI QLRDFISKPI LAKEDPIRAE ENSTTRP00000004926/1-1074 EVWVSTAARN ATIYDKVFRC LPNDEVHNLI QLRDFISKPI LAKEDPIRAE bmy_17773T0/1-740 ---------- ---------- ---------- ---------- ---------- BACU017817/1-1013 EVWVSTAARN ATIYDKVFRC LPNDEVHNLI QLRDFISKPI LAKEDPIRAE 1101 1150 ENSP00000342793/1-1074 EELKKIRGFL VQFPFYFLSE ESLLPSVGTK EAIVPMEVWT ENSBTAP00000042452/1-1034 EELKKIRGFL VQFPFYFLSE ENLLPSVGTK EAMVPMEVWT ENSTTRP00000004926/1-1074 EELKKIRGFL VQFPFYFLSE ENLLPSVGTK EAMVPTEVWT bmy_17773T0/1-740 ---------- ---------- ---------- ---------- BACU017817/1-1013 EELKKIRGFL VQFPFYFLSE ENLLPSVGTK EAMVPTEVWT