KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:31 2014 Check: 00 .. Name: ENSP00000437532/1-331 Len: 378 Check: 4410 Weight: 1.00 Name: ENSBTAP00000042462/1-332 Len: 378 Check: 1340 Weight: 1.00 Name: bmy_00741T0/1-375 Len: 378 Check: 602 Weight: 1.00 Name: BACU020046/1-300 Len: 378 Check: 9496 Weight: 1.00 Name: ENSTTRP00000012467/1-292 Len: 378 Check: 1079 Weight: 1.00 // 1 50 ENSP00000437532/1-331 MLNRKTSHFL GMRVQSELEH LSELRREA-- -GKDRSSVHG SAARTRASVR ENSBTAP00000042462/1-332 MIRRKSSQFQ GLKMQSELVQ HYELRREP-- -EKDLSSLDE SATRMGTGVR bmy_00741T0/1-375 MIRRKSSQFQ GLKMQSELEQ HYELRREP-- -KKDLRSLDE SATRMGTGVH BACU020046/1-300 -MRRQVSAFL G--------- PLEIRNGSRT RGHEQHCLSQ SAFSLQ---- ENSTTRP00000012467/1-292 ----KASRFL G--------- PLEIRNGS-- --RNNSCLSQ CAFSLQ---- 51 100 ENSP00000437532/1-331 TQWTTAAAAK ADEDPGANLF PPPLPRPRIC MWKYLDVHSM HQLEKTTNA- ENSBTAP00000042462/1-332 TESGTVASVD VDNDPSANLF PPPLPQPRIC IWKYLDIHSM HMLEKTASTE bmy_00741T0/1-375 TESGTVASVN ADEDPAANLF PPPLPQPRIC IWKYLDIHSM HRLEKTANVE BACU020046/1-300 ---------- ---------- -PPLPQTRIC IWKYLDIHSM HRLEKTANVE ENSTTRP00000012467/1-292 ---------- ---------- -PPLPQPRIC IWKYLDIHSM HRLEKTANVE 101 150 ENSP00000437532/1-331 EMREVLAELL ELGCPEQSLR DAITLDLFCH ALIFCRQQGF SLEQTSAACA ENSBTAP00000042462/1-332 EMREVLAELL GLGSPEKSLR DAITLDLFSH ALIFCRQQGF SLEQTSTACA bmy_00741T0/1-375 EMREVLAELL GLGSPAQSLR DAITLDLFSH ALIFCRQQGF SLEQTSTACA BACU020046/1-300 EMREVLAELL GLGSPAQSLR DAITLDLFSH ALIFCRQQGF SLEQTSTACA ENSTTRP00000012467/1-292 EMREVLAELL GLGSPAQSLR DAITLDLFSH ALIFCRQQGF SLEQTSTACA 151 200 ENSP00000437532/1-331 LLQDLHKACI ATPLGNVEEC YRYFTSVLFC HGVR------ ---------- ENSBTAP00000042462/1-332 LLQDLHKACI ETPLGNVEEC YRYFTSVLFC HGVR------ ---------- bmy_00741T0/1-375 LLQDLHKACI ATPLGNVEEC YRYFTSVLFC HGIRVRASGG GQSSNYQSSP BACU020046/1-300 LLQDLHKACI ATPLGNVEEC YRYFTSVLFC HGIR------ ---------- ENSTTRP00000012467/1-292 LLQDLHKACI ATPLGNVEEC YRYFTSVLFC HGIR------ ---------- 201 250 ENSP00000437532/1-331 -RPPFSIDLF KEEQLLALED YVVNTYFRHF KLYKYVFTPQ VRLDLSLTYM ENSBTAP00000042462/1-332 -RPPFSINLF KEEQLLALAD YVVNTYFRHF KLYKYVFTPQ VRLDLSLTYM bmy_00741T0/1-375 QRPPFSINLF KEEQLLALAD YVVNTYFRHF KLYKYVFTPQ VRLDLSLTYV BACU020046/1-300 -RPPFSINLF KEEQLLALAD YVVNTYFRHF KLYKYVFTPQ VRLDLSLTYV ENSTTRP00000012467/1-292 -RPPFSINLF KEEQLLALAD YVVNTYFRHF KLYKYVFTPQ VRLDLSLTYM 251 300 ENSP00000437532/1-331 GLQPPKLWPE SET------- ---------- ---------E KEESKEMEEQ ENSBTAP00000042462/1-332 GLKPPSLWSE DET------- ---------- ---------E KEKGGEVEQQ bmy_00741T0/1-375 GLQAPKLWPK DETGKGECQG EGWTALGLGL KPPPAFWLAE KEEGEEVEEQ BACU020046/1-300 GLQAPKLWPK DET------- ---------- ---------E KEEGEEVEEQ ENSTTRP00000012467/1-292 GLQAPKLWPK DET------- ---------- ---------E KEEGEEVEEQ 301 350 ENSP00000437532/1-331 AVTPQKEELE TVAPPEPEPS HIHVLRAYIK TQVNKELEQL QGLVEERLKA ENSBTAP00000042462/1-332 AVIAQEVEPE TVVQPKPEPS QVSILRAYIK NQMNKELRQL QQLVEERLKA bmy_00741T0/1-375 AVTPEEEEPE TVVQPEPEPS QVSVLRAYIK TQMNKELEQL QQLVEERLKA BACU020046/1-300 AVTPEEEEPE TVVQPEPEPS QVSVLRAYIK TQMNKELEQL QQLVEERLKA ENSTTRP00000012467/1-292 ALTPDEEEPE TVVQPEPEPS QVSILRAYIK TQMNKELEQL QQLVEEQLKA 351 400 ENSP00000437532/1-331 SEERLSSKLT ALERPFQLPP GKGKSKTK ENSBTAP00000042462/1-332 SEERLSSKLT TLERPLQLPP GKGKNKTK bmy_00741T0/1-375 SEERLGSKLT ALERPLQLPP GKGKNKTK BACU020046/1-300 SEERLGSKLT ALERPLQLPP GKGKNKTK ENSTTRP00000012467/1-292 SEERLSSKLT ALERPLQLPP GKGKNKT-