KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:32 2014 Check: 00 .. Name: BACU000610/1-889 Len: 971 Check: 5559 Weight: 1.00 Name: ENSP00000301175/1-536 Len: 971 Check: 2295 Weight: 1.00 Name: ENSBTAP00000042469/1-461 Len: 971 Check: 9170 Weight: 1.00 Name: bmy_12301T0/1-376 Len: 971 Check: 8147 Weight: 1.00 Name: ENSTTRP00000016580/1-491 Len: 971 Check: 6930 Weight: 1.00 // 1 50 BACU000610/1-889 ---------- ---------- ---------- ---------- ---------- ENSP00000301175/1-536 MSPRVVSNSS VLASQSVGIT NVRTVFSNVF NNTTAFPILR GSNCHKITAP ENSBTAP00000042469/1-461 ---------- ---------- ---------- ---------- ---------- bmy_12301T0/1-376 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016580/1-491 ---------- ---------- -----FSNLF SSTTLSPILR -SNCNKITAP 51 100 BACU000610/1-889 ---------- ---------- ------MLWT CRALCSQAGP SPGGWKPLSF ENSP00000301175/1-536 GLGKGQLVNL LPPENLPWCG GSQGPRMLRT CYVLCSQAGP PSRGWQSLSF ENSBTAP00000042469/1-461 ---------- ---------- ------MLQT CPVLRSRAGP SPGSWQPLSF bmy_12301T0/1-376 ---------- ---------- ------MLWT CRVLCSQAGP SPGGWKPLSF ENSTTRP00000016580/1-491 G--GKGHVDQ LPPKPPTWCG SGGGVLMLWT CRVLCSQAGP SAGGWKPLCF 101 150 BACU000610/1-889 DGGAFHLKGT GELTRALLVL RLCAWPPLVT HGLALQAWSQ RLLGSQLSGA ENSP00000301175/1-536 DGGAFHLKGT GELTRALLVL RLCAWPPLVT HGLLLQAWSR RLLGSRLSGA ENSBTAP00000042469/1-461 DGGAFHLKST GELTRALLVL RLCAWPPLVT HGLALQAWSQ RLLGSWLSGA bmy_12301T0/1-376 DGGAFHLKGT GELTRALLVL RLCAWPPLVT HGLALQAWSQ RLLGSQLSGA ENSTTRP00000016580/1-491 DGGAFHLKST GELTRALLVL RLCAWPPLVT HGLALQAWSQ RLLGSQLSGA 151 200 BACU000610/1-889 LLRASIYGQF VAGETTEEVR GCVQQLQTLG LRPLLAVPTE EEPDSAVKTG ENSP00000301175/1-536 FLRASVYGQF VAGETAEEVK GCVQQLRTLS LRPLLAVPTE EEPDSAAKSG ENSBTAP00000042469/1-461 LLRASIYGQF VAGETAEEVR SCVLQLQNLG LRPLLAVPTE EEPDSAVKTG bmy_12301T0/1-376 LLRASIYGQF VAGETTEEVR GCVQQLQTLG LRPLLAVPTE EEPDSAVKTG ENSTTRP00000016580/1-491 LLRASVYGQF VAGETTEEVR GCVQQLQSLG LRPLLAVPTE EEPDSAVKTG 201 250 BACU000610/1-889 EAWYEGNLRA MLRCVDLSRG LLETPGPTGN ILMQLKITAL MNTRLC---- ENSP00000301175/1-536 EAWYEGNLGA MLRCVDLSRG LLEPPSLAEA SLMQLKVTAL TSTRLCKELA ENSBTAP00000042469/1-461 EAWYEGNLSA MLRCVDLSRG LLETPDPTGN ALMQLKMTAL MSTRLCKQLT bmy_12301T0/1-376 EAWYEGNLSA MLRCVDLSRG LLETPGPTGN ILMQLKITAL MNTRLC---- ENSTTRP00000016580/1-491 EAWYEGNLSA MLRCVDLSRG LLESPGPTGN ILMQLKITAL MSTRLCKELT 251 300 BACU000610/1-889 --VRDRRGGG GGRGXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301175/1-536 SWVRRP---G ASLELSPERL AEAMDSG--- ----QNLQVS CLNAEQNQHL ENSBTAP00000042469/1-461 SWVLRP---G DSLELSPKRL AEAMDSG--- ----QDLQVS CLNTEQTRHL bmy_12301T0/1-376 --VRDR---Q GPPGLLPQCR ANPASPGLLE PFAPGGTGNT CGRGLAPLHL ENSTTRP00000016580/1-491 SRVRRP---G GSLELSPERL AEAMDSG--- -------RKT AGRVQPT--- 301 350 BACU000610/1-889 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301175/1-536 RASLS----R LHRVAQYARA QHVRLLVDAE YTSLNPALSL LVAALAVRWN ENSBTAP00000042469/1-461 QASLS----R LHRVVQHAQA QRVRLLVDAE YTSLNPALSL LVAALATRWN bmy_12301T0/1-376 LAGHSWGPDH SLSHPQHARA QHVRLLVDAE YTCLNPALSL LVAALATRWN ENSTTRP00000016580/1-491 ---------- ---ALHHARA QHVRLLVDAE YTSLNPALSL LVAALATRWN 351 400 BACU000610/1-889 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301175/1-536 SPGEGGPWVW NTYQACLKDT FERLGRDAEA AHRAGLAFGV KLVRGAYLDK ENSBTAP00000042469/1-461 SSGEGGPWVW NTYQAYLKDT YERLRRDAEA ADRAGLAFGV KLVRGAYLDK bmy_12301T0/1-376 SPREGGPWVW NTYQAYLKDT YEQLRRDAEA ADRAGLAFGV KLVRGAYLDK ENSTTRP00000016580/1-491 GPREGGPWVW NTYQAYLKDT YEQLRRDAEA ADRAGLAFGV KLVRGAYLDK 401 450 BACU000610/1-889 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301175/1-536 ERAVAQLHGM EDPTQPDYEA TSQSYSRCLE LMLTHVARHG PMCHLMVASH ENSBTAP00000042469/1-461 ERETARLQGT EDPTQPDYEA TSQSYSRCLE LMLTQVSHRG PMCHLMVASH bmy_12301T0/1-376 EREVARLQGT EDPTQPDYKA TSQSYSRCLE LMLTQVSHRG PMCPLMVASH ENSTTRP00000016580/1-491 EREVARL-GT EDPTQPDY-A TSQSYSRCLE LMLTQVSHRG PMCPLMVASH 451 500 BACU000610/1-889 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301175/1-536 NEESVRQATK RMWELGIPLD GTVCFGQLLG MCDHVSLALG QAGYVVYKSI ENSBTAP00000042469/1-461 NEDSVRQATK RMWELGIPPD GPVCFGQLLG MCDHVSLALG QAGYAVYKSI bmy_12301T0/1-376 NEDSVHQATE R--------- ---------- ---------- ---------- ENSTTRP00000016580/1-491 NEDSVHQATK RMWELGIPLD GPVCFGQLLG MCDHVSLALG QAGYAVYKSI 501 550 BACU000610/1-889 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301175/1-536 PYGSLEEVIP YLIRRAQENR SVLQGARREQ ELLSQELWRR LLPGCRRI-P ENSBTAP00000042469/1-461 PYGSLEEVIP YLIRRAQENR SVLRGARREQ ELLSQELRRR LLGRSLRVSP bmy_12301T0/1-376 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016580/1-491 PYGSLEEVIP YLIRRAQENQ SVLRGARREQ ELLSQELRRR LLGRGLRV-P 551 600 BACU000610/1-889 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301175/1-536 H--------- ---------- ---------- ---------- ---------- ENSBTAP00000042469/1-461 H--------- ---------- ---------- ---------- ---------- bmy_12301T0/1-376 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016580/1-491 H--------- ---------- ---------- ---------- ---------- 601 650 BACU000610/1-889 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301175/1-536 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042469/1-461 ---------- ---------- ---------- ---------- ---------- bmy_12301T0/1-376 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016580/1-491 ---------- ---------- ---------- ---------- ---------- 651 700 BACU000610/1-889 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301175/1-536 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042469/1-461 ---------- ---------- ---------- ---------- ---------- bmy_12301T0/1-376 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016580/1-491 ---------- ---------- ---------- ---------- ---------- 701 750 BACU000610/1-889 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301175/1-536 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042469/1-461 ---------- ---------- ---------- ---------- ---------- bmy_12301T0/1-376 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016580/1-491 ---------- ---------- ---------- ---------- ---------- 751 800 BACU000610/1-889 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301175/1-536 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042469/1-461 ---------- ---------- ---------- ---------- ---------- bmy_12301T0/1-376 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016580/1-491 ---------- ---------- ---------- ---------- ---------- 801 850 BACU000610/1-889 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301175/1-536 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042469/1-461 ---------- ---------- ---------- ---------- ---------- bmy_12301T0/1-376 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016580/1-491 ---------- ---------- ---------- ---------- ---------- 851 900 BACU000610/1-889 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301175/1-536 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042469/1-461 ---------- ---------- ---------- ---------- ---------- bmy_12301T0/1-376 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016580/1-491 ---------- ---------- ---------- ---------- ---------- 901 950 BACU000610/1-889 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301175/1-536 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042469/1-461 ---------- ---------- ---------- ---------- ---------- bmy_12301T0/1-376 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016580/1-491 ---------- ---------- ---------- ---------- ---------- 951 1000 BACU000610/1-889 XXXXXXXXXK KLKKINVQRE K ENSP00000301175/1-536 ---------- ---------- - ENSBTAP00000042469/1-461 ---------- ---------- - bmy_12301T0/1-376 ---------- ---------- - ENSTTRP00000016580/1-491 ---------- 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