KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:34 2014 Check: 00 .. Name: ENSP00000334876/1-563 Len: 745 Check: 9324 Weight: 1.00 Name: ENSBTAP00000042484/1-561 Len: 745 Check: 5806 Weight: 1.00 Name: ENSTTRP00000004427/1-329 Len: 745 Check: 9584 Weight: 1.00 Name: bmy_20902T0/1-332 Len: 745 Check: 7163 Weight: 1.00 Name: BACU017389/1-745 Len: 745 Check: 757 Weight: 1.00 // 1 50 ENSP00000334876/1-563 MDFGSLETVV ANSAFIAARG SFDGSSSQPS RDKKYLAKLK LPPLSKCESL ENSBTAP00000042484/1-561 MDFGSLETVV ANSAFIAARG SFDASSGPAS RDRKYLARLK LPPLSKCEAL ENSTTRP00000004427/1-329 MDFGSLETVV ANSAFIAART SFDASSGPTS RDRKYLARLK LSPLSKCGAL bmy_20902T0/1-332 MDFGSLETVV ANSAFIAARA SFDASSGPTS RDRKYLARLK LPPLSKCEAL BACU017389/1-745 MDFGSLETVV ANSAFIAARA SFDASSGPTS RDRKYLARLK LPPLSKCEAL 51 100 ENSP00000334876/1-563 RDSLSLEFES VCLEQPIGKK LFQQFLQSAE KHLPALELWK DIEDYDTADN ENSBTAP00000042484/1-561 RESLDLGFEG MCLEQPIGKR LFQQFLRTHE QHGPALQLWK DIEDYDTADD ENSTTRP00000004427/1-329 QASLDLGFES VCSEQPIGKR LFQQFLQAQE QHVPALELWR DIEVYNTAGD bmy_20902T0/1-332 QASLDLGFES VCSEQPIGKR LFQQFLQAHE QHVPALGLWR DIEDYDTADD BACU017389/1-745 QASLDLGFES ACSEQPIGKR LFQQFLQAHE QHVPALGLWR DIEDYDTTDD 101 150 ENSP00000334876/1-563 DLQPQKAQTI LAQYLDPQAK LFCSFLDEGI VAKFKEGPVE IQDGLFQPLL ENSBTAP00000042484/1-561 ALRPQKAQAL RAAYLEPQAQ LFCSFLDAET VARAR---AG AGDGLFQPLL ENSTTRP00000004427/1-329 DLRPQKAQAI RAEYLDPQAK LFCGFLDKEM VAQVREGPAG AGDGLFQPLL bmy_20902T0/1-332 DLRPQKAQAI RAEYLDPQAK LFCGFLDKET AAQAREGPAG AGAGLFQPLL BACU017389/1-745 DLRPQKAQAI RAEYLDPQAK LFCGFLDKET AAQAREGPAG ARDGLFQPLL 151 200 ENSP00000334876/1-563 QATLAHLGQA PFQEYLGSLY FLRFLQWKWL EAQPMGEDWF LDFRVLGKGG ENSBTAP00000042484/1-561 RAVLAHLGQA PFQEFLDSLY FLRFLQWKWL EAQPMGEDWF LDFRVLGRGG ENSTTRP00000004427/1-329 QATLAHLSQA PFQQYLDSLY FQRFLQWKWL EAQPVGEDWF LDFRVLGRGG bmy_20902T0/1-332 RATLAHLSQA PFQQYLDSLY FQRFLQWKWL EAQPVGEDWF LDFRVLGRGG BACU017389/1-745 RATLAHLSQA PFQQYLDSLY FQRFLQWKWL EAQPVGEDWF LDFRVLGRGG 201 250 ENSP00000334876/1-563 FGEVSACQMK ATGKLYACKK LNKKRLKKRK GYQGAMVEKK ILMKVHSRFI ENSBTAP00000042484/1-561 FGEVFACQMK ATGKLYACKK LNKKRLKKRK GYQGAMVEKK ILAKVHSRFI ENSTTRP00000004427/1-329 FGEVSACQMK ATGKMYACKK LNKKRLKKRK GYKGAMVEKK ILAKVHSRFI bmy_20902T0/1-332 FGEVSACQMK ATGKMYACKK LNKKRLKKRK GYKGAMVEKK ILAKVHSRFI BACU017389/1-745 FGEVSACQMK ATGKMYACKK LNKKRLKKRK GYKGAMVEKK ILAKVHSRFI 251 300 ENSP00000334876/1-563 VSLAYAFETK ADLCLVMTIM NGGDIR---- ---------- ---------- ENSBTAP00000042484/1-561 VSLAYAFETK TDLCLVMTIM NGGDIR---- ---------- ---------- ENSTTRP00000004427/1-329 VSLAYAFETK TDLCLVMTVM NGGDIR---- ---------- ---------- bmy_20902T0/1-332 VSLAYAFETK TDLCLVMTIM NGGDIR---- ---------- ---------- BACU017389/1-745 VSLAYAFETK TDLCLVMTIM NGGDIRRYTV LCCTMLHYVT PSYTALYYST 301 350 ENSP00000334876/1-563 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042484/1-561 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004427/1-329 ---------- ---------- ---------- ---------- ---------- bmy_20902T0/1-332 ---------- ---------- ---------- ---------- ---------- BACU017389/1-745 LYVPLYRTAL YYSTPYVPLY RAALYYSTPY VPLYRAALYY STLTPYVPLY 351 400 ENSP00000334876/1-563 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042484/1-561 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004427/1-329 ---------- ---------- ---------- ---------- ---------- bmy_20902T0/1-332 ---------- ---------- ---------- ---------- ---------- BACU017389/1-745 RAALYYSTPY VPLYRAALYY SPPSVPLSRA ALYYSTPYVP LYRAALYYST 401 450 ENSP00000334876/1-563 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042484/1-561 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004427/1-329 ---------- ---------- ---------- ---------- ---------- bmy_20902T0/1-332 ---------- ---------- ---------- ---------- ---------- BACU017389/1-745 PYVPLYRAAL YYSTPYVPLY RAALYYSTPY VPLYRAALYY STPYVPLYRA 451 500 ENSP00000334876/1-563 -------YHI YNVNEENPGF PEPRALFYTA QIICGLEHLH QRRIVYRDLK ENSBTAP00000042484/1-561 -------YHI YNVDEDNPGF QEPRAIFYTA QIVSGLEHLH QRNIIYRDLK ENSTTRP00000004427/1-329 -------YHI YNVDEENPGF PEARALFYTA QIISGLEHLH QRGIIYRDLK bmy_20902T0/1-332 -------YHI YNVDEENPGF QEPRAIFYTA QIISGLEHLH QRGIIYRDLK BACU017389/1-745 ALYYSTLYHI YNVDEENPGF QEPRAVFYTA QIISGLEHLH QRGIIYRDLK 501 550 ENSP00000334876/1-563 PENVLLDNDG NVRISDLGLA VELLDGQSKT KGYAGTPGFM APELLQGEEY ENSBTAP00000042484/1-561 PENVLLDDDG NVRISDLGLA VELKAGQTKT KGYAGTPGFM APELLLGEEY ENSTTRP00000004427/1-329 PENVLLDDDG ---------- ---------- ---------- ---------- bmy_20902T0/1-332 PENVLLDDD- ---------- ---------- ---------- ---------- BACU017389/1-745 PENVLLDDDG NIRISDLGLA VELKEGQTKT KGFAGTPGFM APELLRGEEY 551 600 ENSP00000334876/1-563 DFSVDYFALG VTLYEMIAAR GPFRARGEKV ENKELKHRII SEPVKYPDKF ENSBTAP00000042484/1-561 DFSVDYFALG VTLYEMIAAR GPFRARGEKV ENKELKQRVL EQAVTYPDKF ENSTTRP00000004427/1-329 ---------- ---------- ---------- ---------- ---------- bmy_20902T0/1-332 ---------- ---------- ---------- ---------- ---------- BACU017389/1-745 DFAVDYFSLG VTLYEMIAAR GPFRARGEKV ENKELKQRVL EEVVTYPDKF 601 650 ENSP00000334876/1-563 SQASKDFCEA LLEKDPEKRL GFRDETCDKL RAHPLFKDLN WRQLEAGMLM ENSBTAP00000042484/1-561 SPASKDFCEA LLQKDPEKRL GFRDGSCDGL RTHPLFRDIS WRQLEAGMLT ENSTTRP00000004427/1-329 ---------- ---------- ---------- ---------- ---------- bmy_20902T0/1-332 ---------- ---------- ---------- ---------- ---------- BACU017389/1-745 SQASKDFCEA LLQKDPERRL GFRDGSCDGL RASPLFRDIN WRQLEAGMLT 651 700 ENSP00000334876/1-563 PPFIPDSKTV YAKDIQDVGA FSTVKGVAFD KTDTEFFQEF ATGNCPIPWQ ENSBTAP00000042484/1-561 PPFVPDSRTV YAKNIQDVGA FSTVKGVAFE KADTEFFQEF ASGTCPIPWQ ENSTTRP00000004427/1-329 ---------- ---------- ---------- ---------- ---------- bmy_20902T0/1-332 -----DQRH- ---------- ---------- ---------- ---------- BACU017389/1-745 PPFVPDSRTV YAKNIQDVGA FSTVRGVAFD KEDTEFFQEF ATGTCPIPWQ 701 750 ENSP00000334876/1-563 EEMIETGIFG ELNVWRSDGQ MPDDMKGISG -GSSSSSKSG MCLVS ENSBTAP00000042484/1-561 EEMIETGVFG DLNVWRPDGQ MPDDMKGVSG QEAAPSSKSG MCVLS ENSTTRP00000004427/1-329 ---------- ---------- ---------- ---------- ----- bmy_20902T0/1-332 ---------- ---------- ---------- ---------- ----- BACU017389/1-745 EEMIEKGIFG DLNVWRPDGQ MPDDMKGISV QEAAPSSKSG LCLVC