KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:35 2014 Check: 00 .. Name: ENSTTRP00000008099/1-292 Len: 396 Check: 7211 Weight: 1.00 Name: BACU007856/1-356 Len: 396 Check: 8894 Weight: 1.00 Name: ENSP00000366095/1-252 Len: 396 Check: 9925 Weight: 1.00 Name: bmy_18654T0/1-236 Len: 396 Check: 672 Weight: 1.00 Name: ENSBTAP00000042496/1-246 Len: 396 Check: 341 Weight: 1.00 // 1 50 ENSTTRP00000008099/1-292 MASFLSSFLP SCLPS--LLF LLQLSSSSAG QFRVMGPGQP IRVLVGDEAE BACU007856/1-356 ---MWKDSEK TSW------- -LPMAGRFSR QFRVMGPGQP IRALVGDEAE ENSP00000366095/1-252 MASLSRPSLP SCLCSFLLLL LLQVSSSYAG QFRVIGPRHP IRALVGDEVE bmy_18654T0/1-236 ---MWKDSEK TSW------- -LRMAGRFSR QFRVMGPGQP IRXLVGDEVE ENSBTAP00000042496/1-246 MASLLSSSLP SCLPS-LLFL LLQLTSSSAG QFRVIGPGHP IRALVGDEVE 51 100 ENSTTRP00000008099/1-292 LPCRISPGKN ATGMEVGWYR PPFSRVVHLY RNGKDQDEEQ APEYRGRTEL BACU007856/1-356 LPCRISPGKN ATGMEVGWYR PPFSRVVHLY RNGKDQAEEQ APEYRGRTEL ENSP00000366095/1-252 LPCRISPGKN ATGMEVGWYR PPFSRVVHLY RNGKDQDGDQ APEYRGRTEL bmy_18654T0/1-236 LPCRISPGKN ATGMEVGWYR PPFSRVVHLY RNGKDQDEEQ APEYRGRTEL ENSBTAP00000042496/1-246 LPCRISPGKN ATGMEVGWYR PPFSRVVHLY RNGKDQDEEQ APEYRGRTQL 101 150 ENSTTRP00000008099/1-292 LKETIGEGKV TLRIRNVRFS DEGGFTCFFR DHSYQEEAAI ELKVE----- BACU007856/1-356 LKETIGEGKV TLRIRNVRFS DEGGFTCFFR DHSYQEEAAM ELKVEVLQSV ENSP00000366095/1-252 LKDAIGEGKV TLRIRNVRFS DEGGFTCFFR DHSYQEEAAM ELKVE----- bmy_18654T0/1-236 LKETIGEGKV TLRIRNVRFS DEGGFTCFFR DHSYQEEAAM ELKVE----- ENSBTAP00000042496/1-246 LKETIGEGKV TLRIRNVRFS DEGGFTCFFR DHSYQEEAAM ELKVE----- 151 200 ENSTTRP00000008099/1-292 ---------- DPFYWINPGV LALIAVLPVL LLQITVGLAF LCLQRRLRGK BACU007856/1-356 NQILSLLRMK DPFYWINPGV LVLIAVLPVL LLQITVGLVF LCLQRRLRGK ENSP00000366095/1-252 ---------- DPFYWVSPGV LVLLAVLPVL LLQITVGLIF LCLQYRLRGK bmy_18654T0/1-236 ---------- DPFYWINPGV LVLIAVLPVL LLQITVGLVF LCLQRRLRGK ENSBTAP00000042496/1-246 ---------- DPFYWINPGV LVLIAVLPVL LLQITVGLVF LCLQRRLRGK 201 250 ENSTTRP00000008099/1-292 LPAEMEDL-R TFDYFGTQVK NLPPPPPKKR GQFLELSNRI NFSSVIYFVS BACU007856/1-356 IPAEIENLHR TFGQF---LE ELTP------ -SFL-----C PFTLPTYFCS ENSP00000366095/1-252 LRAEIENLHR TFD------- ---P------ -HFL------ --RVPCWKIT bmy_18654T0/1-236 LPAEIENLHR TFD------- ---P------ -HFL------ --TVPCWKIT ENSBTAP00000042496/1-246 LWAEIENLHR TFD------- ---P------ -HFL------ --MVPCWKIT 251 300 ENSTTRP00000008099/1-292 PFPQLLPSSP PFFYS----- ---------- ------LVSS IWKPSLVTAR BACU007856/1-356 L--VCLPSGN PLWLQPGSRS PLQQRAPVLQ SDTDKRVSAM NWRPGTSSRQ ENSP00000366095/1-252 LF-VIVPVLG PLVAL----- ---------- ------IICY NW-------- bmy_18654T0/1-236 LF-VIVPVLG PLVAL----- ---------- ------IICY NW-------- ENSBTAP00000042496/1-246 LF-VIVPVLG PLVAL----- ---------- ------IICY NW-------- 301 350 ENSTTRP00000008099/1-292 QLLFSPSEGT CAAEHRRVSA MNSSLQII-- ---------- ---------- BACU007856/1-356 II-------- ----AHQLCN GGRFFQDLSP AGKEQEKPKT SKTAPSDLHS ENSP00000366095/1-252 -L-------- ----HRRLA- -GQFLEEL-- ---------- ---------- bmy_18654T0/1-236 -L-------- ----HRRLA- -GQFLEEL-- ---------- ---------- ENSBTAP00000042496/1-246 -L-------- ----HRRLA- -GQFLEEL-- ---------- ---------- 351 400 ENSTTRP00000008099/1-292 ---------- ----AHQ--- ---------- ---------- ------ BACU007856/1-356 EDMASPNQKQ EMGRNPQNTG QSSILPRAAY RGARGARDDN WATHLL ENSP00000366095/1-252 ---------- ---LFHLEAL SG-------- ---------- ------ bmy_18654T0/1-236 ---------- ---RNPF--- ---------- ---------- ------ ENSBTAP00000042496/1-246 ---------- ---RNPF--- ---------- ---------- ------