KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:40 2014 Check: 00 .. Name: ENSTTRP00000008512/1-366 Len: 405 Check: 8335 Weight: 1.00 Name: bmy_17884T0/1-319 Len: 405 Check: 6427 Weight: 1.00 Name: BACU005906/1-373 Len: 405 Check: 3976 Weight: 1.00 Name: ENSP00000377409/1-393 Len: 405 Check: 4243 Weight: 1.00 Name: ENSBTAP00000042549/1-373 Len: 405 Check: 479 Weight: 1.00 // 1 50 ENSTTRP00000008512/1-366 ---------- --MAMSHLLP W-LFLLPALC GPGTAVGTTS SPACAQGPEF bmy_17884T0/1-319 ---------- --MPRES--- ---------- GPGSAA---- ---------- BACU005906/1-373 ---------- --MAKSHLLP W-LFLLAALC GPGTAVGTTP SLACAQGPEF ENSP00000377409/1-393 MHQAGYPGCR GAMAESHLLQ WLLLLLPTLC GPGTAAWTTS SLACAQGPEF ENSBTAP00000042549/1-373 ---------- --MAKSHLLP W-LLLLPILC GPGTAAAITY SLACAQGPEF 51 100 ENSTTRP00000008512/1-366 WCQSLEQALQ CRALGHCLQE VWGHVEAADL CQECEDITHF LIKMAKEVIS bmy_17884T0/1-319 ---HLDLA-- ---------- -----DEDDL CQECEDITYV LTKMAKEVIS BACU005906/1-373 WCQSLEQALQ CRALGHCLKE VWGHVEADDL CQECEDITYV LTKMAKEVIS ENSP00000377409/1-393 WCQSLEQALQ CRALGHCLQE VWGHVGADDL CQECEDIVHI LNKMAKEAIF ENSBTAP00000042549/1-373 WCQSLEQALQ CRALGHCLQE VWGHVEADDL CQECENISRL LTKMAKEAIF 101 150 ENSTTRP00000008512/1-366 QDTIREFLQH KCDVIPLKLL GSQCQLMLDT YFPLVISHFQ SHMNPKAICG bmy_17884T0/1-319 QGTIRELLEH ECDIFPLKLL GSQCHRMLDT YFPLVIHHFQ NQMSPKATCE BACU005906/1-373 QGTIRELLEH ECDIFPLKLL GSQCHRMLDT YFPLVIHHFQ NQMSPKATCE ENSP00000377409/1-393 QDTMRKFLEQ ECNVLPLKLL MPQCNQVLDD YFPLVIDYFQ NQTDSNGICM ENSBTAP00000042549/1-373 QDSVRKFLEQ ECDVLPLKLL APLCRHLLDT YFPLIIEHFQ SHMNPKFICQ 151 200 ENSTTRP00000008512/1-366 SLGLCKRGQP EPGQEP---- -------EP- SGPLQDKLVL SMLPGALQER bmy_17884T0/1-319 HLGLCKRRHP EPGQEP---- -------EP- SGPLQDKLVL SVLPGALQAR BACU005906/1-373 HLGLCKRRHP EPRQEP---- -------EP- SGPLQDKLVL SVLPGALQAR ENSP00000377409/1-393 HLGLCKSRQP EPEQEPGMSD PLPKPLRDPL PDPLLDKLVL PVLPGALQAR ENSBTAP00000042549/1-373 HVGLCKPRHP EPGKGP---- -------EP- WGPLLDKLAL PLLPGVPQAK 201 250 ENSTTRP00000008512/1-366 PGPQTQDLSE QQLSIPMPLP FCWLCRNMIK RIKDKIPKGT L----VQVCH bmy_17884T0/1-319 PGPQTQDLSE QRFPLPIPLP VCWLCRTLIK RIQAVIPKGT LATTVAQVCH BACU005906/1-373 PGPQTQDLSE QRFPLPIPLP VCWLCRTLIK RIQAVIPKGT LATTVAQVCH ENSP00000377409/1-393 PGPHTQDLSE QQF--PIPLP YCWLCRALIK RIQAMIPKGA LAVAVAQVCR ENSBTAP00000042549/1-373 PGPQTQDLSE QLF--PIPIP YCWLCRTLIK RIQAVIPKGV LAMTVAQVCH 251 300 ENSTTRP00000008512/1-366 RIAPVVGGIC QFLSKHYVGT LINTLLDRVL PQLLCGPTLR CSSEDGAGP- bmy_17884T0/1-319 VVPLVVGGIC QCLAERYVAI LLNTLLDRTL PQLVCGLILR CSSEDGAGPA BACU005906/1-373 VVPLVVGGIC QCLAERYVAI LLNTLLDRVL PQLVCGLILR CSSEDGAGPA ENSP00000377409/1-393 VVPLVAGGIC QCLAERYSVI LLDTLLGRML PQLVCRLVLR CSMDDSAGP- ENSBTAP00000042549/1-373 VVPLLVGGIC QCLVERYSVI LLDTLLGRML PQLVCGLVLR CSSEDSAGPA 301 350 ENSTTRP00000008512/1-366 ----GSLPGE WLPQDTECQL CVSVTTQAGK SSEQAMPQAM RQACLGSWLD bmy_17884T0/1-319 LTALGSLPGE WLPQDTECQL CVSVTTQAGK SSEQAMPQAM RQACLGSWLD BACU005906/1-373 LTALGSLPGE WLPQDTECQL CVSVTTQAGK SSEQAMPQAM RQACLGSWLD ENSP00000377409/1-393 ----RSPTGE WLPRDSECHL CMSVTTQAGN SSEQAIPQAM LQACVGSWLD ENSBTAP00000042549/1-373 LPALGSVPGE WLPQDSDCQL CMFVTTQAGN SSEQATPQAM RQACLGTWLD 351 400 ENSTTRP00000008512/1-366 RQKCEQFVEQ YAPQLQTLVS GG---W--DA HTACQAVGMC MTPVSPLQLV bmy_17884T0/1-319 RQKVR----- -GRHIRGLGP RGCRWWRVEP RKGFPARDTL R--------- BACU005906/1-373 RQKCEQFVTQ HAPQVQTLVS GG---W--DA HTACQTGQSL MSPKR--KHM ENSP00000377409/1-393 REKCKQFVEQ HTPQLLTLVP RG---W--DA HTTCQALGVC GTMSSPLQCI ENSBTAP00000042549/1-373 RQKCERFVEE NAPRLQTLVS SG---W--DA HMACQALGTC AAPFSPLQCV 401 450 ENSTTRP00000008512/1-366 HRPDF bmy_17884T0/1-319 YFPRS BACU005906/1-373 LESQL ENSP00000377409/1-393 HSPDL ENSBTAP00000042549/1-373 HSPHF