KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:53:44 2014  Check: 00 ..

 Name: ENSP00000376553/1-283     Len:    289  Check:  8291  Weight:  1.00
 Name: ENSBTAP00000042582/1-287  Len:    289  Check:  3224  Weight:  1.00
 Name: bmy_08266T0/1-282         Len:    289  Check:  7467  Weight:  1.00
 Name: BACU008371/1-251          Len:    289  Check:  7658  Weight:  1.00

//


                          1                                                   50
ENSP00000376553/1-283     MVSAAAPSLL ILLLLLLGSV PATDARSVPL KATFLEDVAG SGEAEGSSAS 
ENSBTAP00000042582/1-287  MVSAAAPSLA VSLLLLLRVL PTV-SYSVSL QAGFLEDTGG SGEAEGSSAS 
bmy_08266T0/1-282         MVSAKAPSLT VSLLLLLRVL PAA-SYSVSL QATFLEDTGG SGEAEGASAS 
BACU008371/1-251          MVSAAAPSLT VSLLLLLRVL PVA-SYSVSL QATFLEDTGG SGEAEGASAS 


                          51                                                 100
ENSP00000376553/1-283     SPSLPPPWTP ALSPTSMGPQ PITLGGPSPP TNFLDGIVDF FRQYVMLIAV 
ENSBTAP00000042582/1-287  SPSLPPPQTP ALSPTLVGPE PTPLAGPKPP TNFLDGIVDF FRQYVMLIAV 
bmy_08266T0/1-282         SPSLPPPRTP ALSLTSVGPQ LTPLAGPKPP TNFLDGIVDF FRQYVMLIAV 
BACU008371/1-251          SPSLPPPRTP ALSLTSVGPQ LTPLAGPKPP TNFLDGIVDF FRQYVMLIAV 


                          101                                                150
ENSP00000376553/1-283     VGSLAFLLMF IVCAAVITRQ KQKASAYYPS SFPKKKYVDQ SDRAGGPRAF 
ENSBTAP00000042582/1-287  VGSLVFLLMF IVCAAVITRQ KHKASAYYPS SFPKKKYVDQ SDRAGGPRAF 
bmy_08266T0/1-282         VGSLVFLLMF IICAALITRQ KHKASAYYPS SFPKKKYVDQ SDRAGGPRAF 
BACU008371/1-251          VGSL------ ---------- ---------- -----KYVDQ SDRAGGPRAF 


                          151                                                200
ENSP00000376553/1-283     SEVPDRAPDS RPEEALDSSR QLQADILAAT QNLKSPTRAA LGGGDGARMV 
ENSBTAP00000042582/1-287  SEVPDRAPDG RPEETLDSSQ QLQAHILAAT QNLKSPSRAA PSSGDLARAP 
bmy_08266T0/1-282         SEVPDRAPDG RPEEALDSSQ QLQADILAAT QNLKSPARAA PGMGDGARMM 
BACU008371/1-251          SEVPDRAPDG RPEEALDSSQ QLQADILAAT QNLKSPARAA PGMGDGARMM 


                          201                                                250
ENSP00000376553/1-283     EGRGAEEEEK GSQEGDQEVQ GHGVPVETPE A---QEEPCS GVLE---GAV 
ENSBTAP00000042582/1-287  EGR-SEEEEK GPREADLEAQ GRALPADKPE VPPLPEEPCS VEADAAAGAA 
bmy_08266T0/1-282         EGK-SEEEEK GSREADQEAQ GHGVPAEKPE VP--PEEPCS AQAD---GAL 
BACU008371/1-251          EGK-LEEEEE GSREADQEAQ GHGVPAEKPE VP--PEEPCS AQAD---GAL 


                          251                                                300
ENSP00000376553/1-283     VAGEGQGELE GSLLLAQEAQ GPVGPPESPC ACSSVHPSV 
ENSBTAP00000042582/1-287  AADEGQGEPD VAPLLAQEAG GPAGPPENPC VCGSVPPSI 
bmy_08266T0/1-282         AAADGQGEPE AAPSLALEAG GPAGSLENPC ACGSVPPSI 
BACU008371/1-251          AAVEGQGEPE AAPSLALEAG GPAGSLENPC ACGSVPPSI