KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:53:44 2014 Check: 00 .. Name: ENSP00000342109/1-414 Len: 415 Check: 4070 Weight: 1.00 Name: BACU007732/1-212 Len: 415 Check: 4648 Weight: 1.00 Name: bmy_17963T0/1-327 Len: 415 Check: 3236 Weight: 1.00 Name: ENSBTAP00000042614/1-414 Len: 415 Check: 6017 Weight: 1.00 // 1 50 ENSP00000342109/1-414 MNPTLGLAIF LAVLLTVKGL LKPSFSPRNY KALSEVQGWK QRMAAKELAR BACU007732/1-212 ----MVMMLM VVIVITLVG- ---------- ---------- ---------- bmy_17963T0/1-327 MNPMLVPGLL LAGLLTVEGL LRPNYSPENH EAVSQGQARK GSTTAQELAK ENSBTAP00000042614/1-414 MNPFLGLGLL LAGLLTVEGL LKSNFSPENH EAVSQGQVEK GKGTAQELAK 51 100 ENSP00000342109/1-414 QNMDLGFKLL KKLAFYNPGR NIFLSPLSIS TAFSMLCLGA QDSTLDEIKQ BACU007732/1-212 ---------- ---------- ---------- ---------- ---------- bmy_17963T0/1-327 RNTDFGLKLF KKLSFNSPDN NILFSPGSIS MAFAMLCLGA QDSTLAEIKE ENSBTAP00000042614/1-414 RNADFGLKLF KKLSFSSPDN NILFSPWSIS MAFSMLSLGA QDSTLAEIKE 101 150 ENSP00000342109/1-414 GFNFRKMPEK DLHEGFHYII HELTQKTQDL KLSIGNTLFI DQRLQPQRKF BACU007732/1-212 ---------- ----AFVFLP HVIDSSS--- ---------- ---------- bmy_17963T0/1-327 AFNFRNIPKK DLHEGFHYLI HRLNQANQDS KMRLGNALFI NQKLKPQKKF ENSBTAP00000042614/1-414 GFNFRNIPEK DLHEAFHYLI HRLNQRNQDQ RLGLGNALFI DQKVKPKQKF 151 200 ENSP00000342109/1-414 LEDAKNFYSA ETILTNFQNL EMAQKQINDF ISQKTHGKIN NLIENIDPGT BACU007732/1-212 ---------- ---------- ---------- ---------- ---------- bmy_17963T0/1-327 LTDVKNLYKA DTVPTNFQNS ENAQ------ ---------- ---------- ENSBTAP00000042614/1-414 LTEVRNMYKA DTIPTNFRNS ENAQKQINNY VSQKTQGKIN NLVKNIDPGT 201 250 ENSP00000342109/1-414 VMLLANYIFF RARWKHEFDP NVTKEEDFFL EKNSSVKVPM MFRSGIYQVG BACU007732/1-212 ---------L RIRWQHEFDP KATKEEEFIL DGNKTVKVPM MFHMGMYEVG bmy_17963T0/1-327 -----NRSMT MSAWQHEFDP KATKEEXFIL DGNKAVKVPM MFHMGMYEVG ENSBTAP00000042614/1-414 VMLLINYIFF RARWQHEFDP KETKEEDFIL DRNKTVKVPM MFHVGMYKVG 251 300 ENSP00000342109/1-414 YDDKLSCTIL EIPYQKNITA IFILPDEGKL KHLEKGLQVD TFSRWKTLLS BACU007732/1-212 HDDQLSCTVL EMPYQGNMMA VFILPDEGKM KHVEEALGMN TFARWKKLLI bmy_17963T0/1-327 HDDQLSCTVL EMPYQGDMTA VFILPDEGKM KH-------- ---------- ENSBTAP00000042614/1-414 HDDQLSCTIL EIPYQSNFTA IFVLPEEGRM KQVEQALGPD TFARWKKLLV 301 350 ENSP00000342109/1-414 RRVVDVSVPR LHMTGTFDLK KTLSYIGVSK IFEEHGDLTK IAPHRSLKVG BACU007732/1-212 RRVTDVFVPR LFITGNHDLK KTLSYLGITK ILEEHGDLTR ISPHRSLKVG bmy_17963T0/1-327 --VTDVFVPR LFITGNHDLK KTLSYLGITK IFEEHGYLTR ISPHRSLKVG ENSBTAP00000042614/1-414 RRVADVFVPR LTITSSYDLK KMLSHLGISK IFEEHGDLTR ISPHRNLKVD 351 400 ENSP00000342109/1-414 EAVHKAELKM DERGTE-GAA GTGAQTLPME TPLVVKIDKP YLLLIYSEKI BACU007732/1-212 EAVHKATLKM DEQVAKIQQQ ARLSSPLPSE ERKSTKAMKE KRL------- bmy_17963T0/1-327 EAVHTATLKM DEKGTE-GPA GSGAQTLPM- ---------- ---------- ENSBTAP00000042614/1-414 EAVHKATLKM DEKGTE-GAA GSGAQTLPME TPIRVKINHR FLLMIWETKM 401 450 ENSP00000342109/1-414 PSVLFLGKIV NPIGK BACU007732/1-212 ---------- ----- bmy_17963T0/1-327 ---------- ----- ENSBTAP00000042614/1-414 NNLLFFGKIV NPSGR