KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:49 2014 Check: 00 .. Name: ENSP00000356146/1-1271 Len: 1343 Check: 5218 Weight: 1.00 Name: ENSBTAP00000042661/1-1268 Len: 1343 Check: 3915 Weight: 1.00 Name: BACU011775/1-1259 Len: 1343 Check: 2875 Weight: 1.00 Name: bmy_14910T0/1-1296 Len: 1343 Check: 4484 Weight: 1.00 Name: ENSTTRP00000013785/1-1259 Len: 1343 Check: 2341 Weight: 1.00 // 1 50 ENSP00000356146/1-1271 MEAVKTFNSE LYSLNDYKPP ISKAKMTQIT KAAIKAIKFY KHVVQSVEKF ENSBTAP00000042661/1-1268 KSSTFNFTED LYSLNDYKPP ISKAKMTQIT KAAIKAIKFY KHVVQSVEKF BACU011775/1-1259 ---------- ---------- -----MTQIT KAAIKAIKFY KHVVQSVEKF bmy_14910T0/1-1296 ---------- ---------- -----MTQIT KAAIKAIKFY KHVVQSVEKF ENSTTRP00000013785/1-1259 ---------- LYSLNDYKPP ISKAKMTQIT KAAIKAIKFY KHVVQSVEKF 51 100 ENSP00000356146/1-1271 IQKCKPEYKV PGLYVIDSIV RQSRHQFGQE KDVFAPRFSN NIISTFQNLY ENSBTAP00000042661/1-1268 IQKCKPEYKV PGLYVIDSIV RQSRHQFGQE KDVFAPRFSN NIISTFQNLY BACU011775/1-1259 IQKCKPEYKV PGLYVIDSIV RQSRHQFGQE KDVFAPRFSN NIISTFQNLY bmy_14910T0/1-1296 IQKCKPEYKV PGLYVIDSIV RQSRHQFGQE KDVFAPRFSN NIISTFQNLY ENSTTRP00000013785/1-1259 IQKCKPEYKV PGLYVIDSIV RQSRHQFGQE KDVFAPRFSN NIISTFQNLY 101 150 ENSP00000356146/1-1271 RCPGDDKSKI VRVLNLWQKN NVFKSEIIQP LLDMAAGIPP PVVTPVLAST ENSBTAP00000042661/1-1268 RCPGDDKSKI VRVLNLWQKN NVFKSEIIQP LLDMAAGIPP PVVTPVLAST BACU011775/1-1259 RCPGDDKSKI VRVLNLWQKN NVFKSEIIQP LLDMAAGIPP PVVTPVLAST bmy_14910T0/1-1296 RCPGDDKSKI VRVLNLWQKN NVFKSEIIQP LLDMAAGIPP PVVTPVLAST ENSTTRP00000013785/1-1259 RCPGDDKSKI VRVLNLWQKN NVFKSEIIQP LLDMAAGIPP PVVTPVLAST 151 200 ENSP00000356146/1-1271 TTAMSNTPGT PVTPVTPANV VQGLPDPWVS QITNTDTLAA VAQILQSPQG ENSBTAP00000042661/1-1268 TAAMSNTPGT PVTPVTPANV VQGLPDPWVS QITNTDTLAA VAQILQSPQG BACU011775/1-1259 TAAMSNTPGT PVTPVTPANV VQGLPDPWVS QITNTDTLAA VAQILQSPQG bmy_14910T0/1-1296 TAAMSNTPGT PVTPVTPANV VQGLPDPWVS QITNTDTLAA VAQILQSPQG ENSTTRP00000013785/1-1259 TAAMSNTPGT PVTPVTPANV VQGLPDPWVS QITNTDTLAA VAQILQSPQG 201 250 ENSP00000356146/1-1271 QQLQQLIQTL QIQQQKPQPS ILQALDAGLV VQLQALTAQL TAAAAAANTL ENSBTAP00000042661/1-1268 QQLQQLIQTL QIQQQKPQPS ILQALDAGLV VQLQALTAQL TAAAAAANTL BACU011775/1-1259 QQLQQLIQTL QIQQQKPQPS ILQALDAGLV VQLQALTAQL TAAAAAASTL bmy_14910T0/1-1296 QQLQQLIQTL QIQQQKPQPS ILQALDAGLV VQLQALTAQL TAAAAAASTL ENSTTRP00000013785/1-1259 QQLQQLIQTL QIQQQKPQPS ILQALDAGLV VQLQALTAQL TAAAAAASTL 251 300 ENSP00000356146/1-1271 TPLEQGVSFN KKLMDRFDFG EDSEHSEEPK KEIPASQLSH VSESVNNSIF ENSBTAP00000042661/1-1268 NPLEQGVSFN KKLMDRFDFG EDSEHSEEPK KEIPASQLSH VSESVNNSIF BACU011775/1-1259 NPLEQGVSLN KKLMDRFDFG EDSEHSEEPK KEIPASQLSH VSESVNNSIF bmy_14910T0/1-1296 NPLEQGVSFN KKLMDRFDFG EDSEHSEEPK KEIPASQLSH VSESVNNSIF ENSTTRP00000013785/1-1259 NPLEQGVSFN KKLMDRFDFG EDSEHSEEPK KEIPASQLSH VSESVNNSIF 301 350 ENSP00000356146/1-1271 HQIAEQLQQQ NLEHLRQQLL EQQQPQK--- ---------- --ATPQDSQE ENSBTAP00000042661/1-1268 HQIAEQLQQQ NLEHLRQQLL EQQQPQK--- ---------- --ATPQDSQE BACU011775/1-1259 HQIAEQLQQQ NLEHLRQQLL EQQQPQKVYN PILWSLELLL CTATPQDSQE bmy_14910T0/1-1296 HQIAEQLQQQ NLEHLRQQLL EQQQPQK--- ---------- --ATPQDSQE ENSTTRP00000013785/1-1259 HQIAEQLQQQ NLEHLRQQLL EQQQPQK--- ---------- --ATPQDSQE 351 400 ENSP00000356146/1-1271 GTFGSEHSAS PSQGSSQQHF LEPEVNLDDS IDIQQQDMDI DEGQDGVEEE ENSBTAP00000042661/1-1268 GTFGSEHSAS PSQGSSQQHF LEPEANLDDS IDIQQQDMDI DEVQDAVEEE BACU011775/1-1259 GTFGSEHSVS PSQGSSQQHF LEPEANLDDS IDIQQQDMDI DEGQDGV-EE bmy_14910T0/1-1296 GTFGSEHSVS PSQGSSQQHF LEPEANLDDS IDIQQQDMDI DEGQDGVEEE ENSTTRP00000013785/1-1259 GTFGSEHSVS PSQGSSQQHF LEPEANLDDS IDIQQQDMDI DEGQDGVEEE 401 450 ENSP00000356146/1-1271 VFEQEAKKVA VRSRSRTHSR SRS------- ---------- ---------- ENSBTAP00000042661/1-1268 IFEQEAKKVA VRSRSRTHSR SRS------- ---------- ---------- BACU011775/1-1259 IFEQEAKKVA VRSRSRTHSR SRS------- ---------- ---------- bmy_14910T0/1-1296 IFEQEAKKVA VRSRSRTHSR SRSSNTSLLS ILKRVQWHMT DRKKETNVTS ENSTTRP00000013785/1-1259 IFEQEAKKVA VRSRSRTHSR SRS------- ---------- ---------- 451 500 ENSP00000356146/1-1271 ---------- ---------- ---------- RSPRKRRSRS RSGSRKRKHR ENSBTAP00000042661/1-1268 ---------- ---------- ---------- RSPRKRRSRS RSGSRKRKHR BACU011775/1-1259 ---------- ---------- ---------- RSPRKRRSRS RSGSRKRKHR bmy_14910T0/1-1296 LSPKESFCFL PSFIPVLDSC LKNELEDTKR KSPRKRRSRS RSGSRKRKHR ENSTTRP00000013785/1-1259 ---------- ---------- ---------- RSPRKRRSRS RSGSRKRKHR 501 550 ENSP00000356146/1-1271 KRSRSRSRER KRKSSRSYSS ERRAREREKE RQKKGLPPIR SKTLSVCSTT ENSBTAP00000042661/1-1268 KRSRSRSRER KRKSSRSYSS ERRAREREKE RQKKGLPPIR SKTLSVCSTT BACU011775/1-1259 KRSRSRSRER KRKSSRSYSS ERRAREREKE RQKKGLPPIR SKTLSVCSTT bmy_14910T0/1-1296 KRSRSRSRER KRKSSRSYSS ERRAREREKE RQKKGLPPIR SKTLSVCSTT ENSTTRP00000013785/1-1259 KRSRSRSRER KRKSSRSYSS ERRAREREKE RQKKGLPPIR SKTLSVCSTT 551 600 ENSP00000356146/1-1271 LWVGQVDKKA TQQDLTNLFE EFGQIESINM IPPRGCAYVC MVHRQDAFRA ENSBTAP00000042661/1-1268 LWVGQVDKKA TQQDLTNLFE EFGQIESINM IPPRGCAYVC MVHRQDAFRA BACU011775/1-1259 LWVGQVDKKA TQQDLTNLFE EFGQIESINM IPPRGCAYVC MVHRQDAFRA bmy_14910T0/1-1296 LWVGQVDKKA TQQDLTNLFE EFGQIESINM IPPRGCAYVC MVHRQDAFRA ENSTTRP00000013785/1-1259 LWVGQVDKKA TQQDLTNV-E EFGQIESINM IPPRGCAYVC MVHRQDAFRA 601 650 ENSP00000356146/1-1271 LQKLSSGSYK IGSKVIKIAW ALNKGVKTEY KQFWDVDLGV TYIPWEKVKV ENSBTAP00000042661/1-1268 LQKLSSGSYK IGSKVIKIAW ALNKGVKTEY KQFWDVDLGV TYIPWEKVKV BACU011775/1-1259 LQKLSSGSYK IGSKVIKIAW ALNKGVKTEY KQFWDVDLGV TYIPWEKVKV bmy_14910T0/1-1296 LQKLSSGSYK IGSKVIKIAW ALNKGVKTEY KQFWDVDLGV TYIPWEKVKV ENSTTRP00000013785/1-1259 LQKLSSGSYK IGSKVIKIAW ALNKGVKTEY KQFWDVDLGV TYIPWEKVKV 651 700 ENSP00000356146/1-1271 DDLEGFAEGG MIDQETVNTE WETVKSSEPV KETVQTTQSP TPVEKETVVT ENSBTAP00000042661/1-1268 DDLEGFAEGG MIDQETVNTE WETVKSSEPV KETVQTTQSP PPAEKETVVT BACU011775/1-1259 DDLEGFAEGG MIDQETVNTE WESVKSSEPV KETVQTAQSP PPAEKETVAT bmy_14910T0/1-1296 DDLEGFAEGG MIDQETVNTE WESVKSSEPV KETVQTTQSP PPVEKETVVT ENSTTRP00000013785/1-1259 DDLEGFAEGG MIDQETVNTE WESVKSSEPV KETVQTTQSP PPVEKETVVT 701 750 ENSP00000356146/1-1271 TQAEVFPPPV AMLQIPVAPA VPTVSLVPPA FPVSMPVPPP GFSPIPPPPF ENSBTAP00000042661/1-1268 TQAEVFPPPV AMLQIPVAPA VPAVNLVPPT FPVSMPVPPP GFSPIPPPPF BACU011775/1-1259 TQAEVFPPPV AMVQIPVAPA VPTVSLVPPA FPVSMPVPPP GFSPIPPPPF bmy_14910T0/1-1296 TQAEVFPPPV AMLQIPVAPA VPTVSLVPPA FPVSMPVPPP GFSPIPPPPF ENSTTRP00000013785/1-1259 TQAEVFPPPV AMLQIPVAPA VHTVSLVPPA FPVSMPVPPP GFSPIPPPPF 751 800 ENSP00000356146/1-1271 LRASFNPSQP PPGFMPPPVP PPVVPPPTIP PVVPTSLVQP SLSMTPETVK ENSBTAP00000042661/1-1268 LRASFNPSQP PPGFMPPPVP PPVVPPPTIP PVVPTSLVQP PLSMTPETVK BACU011775/1-1259 LRASFNPSQP PPGFMPPPVP PPVVPPPTIP PVVPTSLVQP PLSMTPETVK bmy_14910T0/1-1296 LRASFNPSQP PPGFMPPPVP PPVVPPPTIP PVVPTSLVQP PLSMTPETVK ENSTTRP00000013785/1-1259 LRASFNPSQP PPGFMPPPVP PPVVPPPTIP PVVPTSLVQP PLSMTPETVK 801 850 ENSP00000356146/1-1271 DVGFGSLVIP GGSVASNLAT SALPAGNVFN APTKQAEPEE KVPHLIDHQI ENSBTAP00000042661/1-1268 DVGFGSLVLP GGSVASSLAT ATLPAGNVFN PPTKQAEPEE KVPHLIDHQI BACU011775/1-1259 DVGFGSLVLP GGSVASSLAT STLPAGSVFN PPTKQAEPEE KVPHLIDHQI bmy_14910T0/1-1296 DVGF------ GGSVASSLAT STLPAGSVFN PPTKQAEPEE KVPHLIDHQI ENSTTRP00000013785/1-1259 DVGFGSLVLP GGSVASSLAT STLPAGSVFN PPTKQAEPEE KVPHLIDHQI 851 900 ENSP00000356146/1-1271 SSGENTRSVI PNDISSNAAI LGGQPPNVTS NSGILGVQRP NVSSNSEILG ENSBTAP00000042661/1-1268 SSAENTRSVI PNDISSGPAI L-GQPPNVTS NSGILGVQRP NVSSNNEILG BACU011775/1-1259 SSGENTRSVI PNDVSGGSAI LGGQPPNVTN NSGILGVQRP NVSSNNEILG bmy_14910T0/1-1296 SSGENTRSVI PNDVSGGAAI LGGQPPNVTX NSGILGVQRP NVSSNNEILG ENSTTRP00000013785/1-1259 SSGENTRSVI PNDVSGGSAI LGGQPPNVTN NSGILGVQRP NVSSNNEILG 901 950 ENSP00000356146/1-1271 VRPSNVSSSS GIIAAQPPNI LNNSGILGIQ PPSVSNSSGL LGVLPPNIPN ENSBTAP00000042661/1-1268 VRPSNVSSSS GIIGPQPPNI LNNSGILGLQ PPNVSSSSGL LGVLPPNMPN BACU011775/1-1259 VRPSNVSNSS GIIGAQPPNI LNNSGILGIQ PPSVSSSSGL LGMLPPNIPN bmy_14910T0/1-1296 VRPSNVSNSS GIIGAQPPNI LNNSGILGIQ PPSVSSSSGL LGMLPPNIPN ENSTTRP00000013785/1-1259 VRPSNVSNSS GIIGAQPPNI LNNSGILGIQ PPSVSSSSGL LGMLPPNIPN 951 1000 ENSP00000356146/1-1271 NSGLVGVQPP NVPNTPGLLG TQPPAGPQNL PPLSIPNQRM PTMPMLDIRP ENSBTAP00000042661/1-1268 NSGLIGVQPP GIPSTSGLLG TQPPAGPQNL PPLNLPNQRM PAMPMLDIRP BACU011775/1-1259 NSGLIGVQPP GVPNTPGLLG TQPPAGPQNL PPLNLSNQRM PAMPMLDIRP bmy_14910T0/1-1296 NSGLIGVQPP GVPNTSGLLG TQPPAGPQNL PPLNLSNQRM PAMPMLDIRP ENSTTRP00000013785/1-1259 NSGLMGVQPP SVPNTSGLLG TQPPAGPQNL PPLNLSNQRM PAMPMLDIRP 1001 1050 ENSP00000356146/1-1271 GLIPQAPGPR FPLIQPGIPP QRGIPPPSVL DSALHPPPRG PFPPGDIFSQ ENSBTAP00000042661/1-1268 GLIPQTPGPR FPLIQPGIPP QRGLPPPAVL DSALHPPPRG PFPPGDIFSP BACU011775/1-1259 GLIPQTPGPR FPLMQPGIPP QRGLPPPVVL DAALHPPPRG PFAPGDIFSP bmy_14910T0/1-1296 GLIPQTPGPR FPLMQPGIPP QRGLPPPAVL DAALHPPPRG PFAPGDIFSP ENSTTRP00000013785/1-1259 GLIPQTPGPR FPLMQPGIPP QRGLPPPAVL DSALHPPPRG PFAPGDIFSP 1051 1100 ENSP00000356146/1-1271 PERPFLAPGR QSVDNVTNPE KRIPLGNDNI QQEGDRDYRF PPIETRESIS ENSBTAP00000042661/1-1268 PERPFLVPGR QNVDNVPNPE KRIPLGNDNI QQEGDRDYRF PPIEPREAIS BACU011775/1-1259 PERPFLVPGR QSVDNVANPE KRIPLGNDNI QQEGDRDYRF PPIETRETIS bmy_14910T0/1-1296 PERPFLVPGR QSVDSVANPE KRIPLGNDNI QQEGDRDYRF PPIETRETIS ENSTTRP00000013785/1-1259 PERPFLVPGR QSVDNVANPE KRIPLGNDNI QQEGDRDYRF PPIETRETIS 1101 1150 ENSP00000356146/1-1271 RPPPVDVRDV VGRPIDPREG PGRPPLDGRD HFGRPPVDIR ENLVRPGIDH ENSBTAP00000042661/1-1268 RPPPVDVRDV VGRPVDPREG PGRPPLDARD HFGRPPVDIR ENLVRPGIDH BACU011775/1-1259 RPPPVDVRDV VGRPVDPREG PGRPPLDGRD HFGRPPVDIR ENLVRPGIDH bmy_14910T0/1-1296 RPPPVDVRDV VGRPVDPREG PGRPPLDGRD HFGRPPVDIR ENLVRPGIDH ENSTTRP00000013785/1-1259 RPPPVDVRDV VGRPVDPREG PGRPPLDGRD HFGRPPVDIR ENLVRPGIDH 1151 1200 ENSP00000356146/1-1271 LGRRDHFGFN PEKPWGHRGD FDEREHRVLP VYGGPKGLHE ERGRFRSGNY ENSBTAP00000042661/1-1268 LGRRDHFGFN PEKPWGPR-D FDEREHRVLP VYGGPKGLHE ERGRFRSGNY BACU011775/1-1259 LGRRDHFGFT PEKPWGHR-D FDEREHRVLP VYGGPKGLHE ERGRFRSGNY bmy_14910T0/1-1296 LGRRDHFGFT PEKPWGHR-D FDEREHRVLP VYGGPKGLHE ERGRFRSGNY ENSTTRP00000013785/1-1259 LGRRDHFGFT QEKPWGHR-D FDEREHRVLP VYGGPKGLHE ERGRFRSGNY 1201 1250 ENSP00000356146/1-1271 RFDPRSGPWN RGFGQEVHRD FDDRRRPWER QRDRDDRDFD FCREMNGNRL ENSBTAP00000042661/1-1268 RFDPRSGPWN RGFGQEVHRD FDDRRRPWER QRDRDDRDFD FCREMNGNRL BACU011775/1-1259 RFDPRSGPWN RGFGQEVHRD FDDRRRPWER QRDRDDRDFD FCREINGNRF bmy_14910T0/1-1296 RFDPRSGPWN RGFGQEVHRD FDDRRRPWER QRDRDDRDFD FCREINGNRF ENSTTRP00000013785/1-1259 RFDPRSGPWN RGFGQEVHRD FDDRRRPWER QRDRDDRDFD FCREINGSRF 1251 1300 ENSP00000356146/1-1271 GRDRIQNTWV PPPHARVFDY FEGATSQRKG DNVPQVNGEN TERHAQPPPI ENSBTAP00000042661/1-1268 GRDRIQNTWI PPPHARVFEF FEGATSQRKG DNVPQVNGEN TERHAQPPPL BACU011775/1-1259 GRERIQNTWV PPPHARVFDF FEGATSQRKG DNVPQVNGEN TERHAHPPPL bmy_14910T0/1-1296 GRDRIQNTWV PPPHARVFDF FEGATSQRKG DNVPQVNGEN TERHAQPPPL ENSTTRP00000013785/1-1259 GRDRIQNTWV PPPHARVFDF FEGATSQRKG DNVPQVNGEN TERHAQPPPL 1301 1350 ENSP00000356146/1-1271 PVQNDPELYE KLTSSNEINK EKSDTVADIE SEPVVESTET EGT ENSBTAP00000042661/1-1268 PAQSDPELYE KLASSSEVNK -KSDTVADVE SEPVVESTET EGT BACU011775/1-1259 PAQSDPELYE KLTSSSEINK EKSDTVADIE SEPVVESTET EGT bmy_14910T0/1-1296 PAQSDPELYE KLTSSSEINK EKSDTVADIE SEPVVESTET EGT ENSTTRP00000013785/1-1259 PAQSDPELYE KLTSSSEINK EKSDTVADIE SEPVVESTET EGT