KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:52 2014 Check: 00 .. Name: ENSBTAP00000042711/1-339 Len: 339 Check: 8492 Weight: 1.00 Name: ENSP00000284674/1-337 Len: 339 Check: 108 Weight: 1.00 Name: ENSTTRP00000014777/1-337 Len: 339 Check: 925 Weight: 1.00 Name: BACU004729/1-322 Len: 339 Check: 9901 Weight: 1.00 Name: bmy_22086T0/1-261 Len: 339 Check: 8525 Weight: 1.00 // 1 50 ENSBTAP00000042711/1-339 MNSWDAGLAG LLVGTMGVSL LSNALVLLCL LHSADIRRQA PALFTLNLTC ENSP00000284674/1-337 MNSWDAGLAG LLVGTMGVSL LSNALVLLCL LHSADIRRQA PALFTLNLTC ENSTTRP00000014777/1-337 KNSWDAGLAG LLVGTMGVSL LSNALVLLCL LHSADIRRQA PALFTLNLTC BACU004729/1-322 ---------- -----MGVSL LSNALVLLCL LHSADIRRQA PALFTLNLTC bmy_22086T0/1-261 MNSWDAGLAG LLVGTMGVSL LSNALVLLCL LHSADIRRQA PALFTLNLTC 51 100 ENSBTAP00000042711/1-339 GNLLCTVVNM PLTLAGVVAQ RPPAGDRLCR LAAFLDTFLA ANSMLSMAAL ENSP00000284674/1-337 GNLLCTVVNM PLTLAGVVAQ RQPAGDRLCR LAAFLDTFLA ANSMLSMAAL ENSTTRP00000014777/1-337 GNLLCTVVNM PLTLAGVVAQ RQPAGDRLCR LAAFLDTFLA ANSMLSMAAL BACU004729/1-322 GNLLCTVVNM PLTLAGVVAQ RQPAGDRLCR LAAFLDTFLA ANSMLSMAAL bmy_22086T0/1-261 GNLLCTVVNM PLTLAGVVAQ RQPAGDRLCR LAAFLDTFLA ANSMLSMAAL 101 150 ENSBTAP00000042711/1-339 SIDRWVAVVF PLSYRAKMRL RDAASRASWS WELGESSPDG ILSLRFSGYK ENSP00000284674/1-337 SIDRWVAVVF PLSYRAKMRL RDAALMVAYT WLHALTFPAA ALALSWLGFH ENSTTRP00000014777/1-337 SIDRWVAVVF PLSYRAKMRL RDAALMVAYT WLHALAFPAA AVVLSWLGFH BACU004729/1-322 SIDRWVAVVF PLSYRAKMRL RDAALMVAYT WLHALAFPAA AVVLSWLGFH bmy_22086T0/1-261 SIDRWVAVVF PLSYRAKMRL RDAALMVAYT WLHALAFPAA AVVLSWLGFH 151 200 ENSBTAP00000042711/1-339 MLRMYQTCQR CYRHPGVNGK IALLFSAFLV VCFRFSDIIE MIAYILNQEI ENSP00000284674/1-337 --QLYASCTL CSRRPDERLR FAVFTGAFHA LSFLLSFVVL CCTYLKVLKV ENSTTRP00000014777/1-337 --QLYASCTL CSRRPDERLR FAVFTGAFHA LSFLLSFVVL CCTYFKVLKV BACU004729/1-322 --QLYASCTL CSRRPDERLR FAVFTGAFHA LSFLLSFVVL CCTYFKVLKV bmy_22086T0/1-261 --QLYASCTL CSRRPDERLR FAVFTGAFHA LSFLLSFVVL CCTYFKVLKV 201 250 ENSBTAP00000042711/1-339 KKCHCSHDSV HSLLPCPLLQ SCHLFVRERC LEEQKRRRQR ATKKISTFIG ENSP00000284674/1-337 ARFHCKRIDV ITMQTLVLLV DLHPSVRERC LEEQKRRRQR ATKKISTFIG ENSTTRP00000014777/1-337 ARFHCRRIDV ITMQTLVLLV DIHPSVRERC LEEQRRRRQR ATKKISTFIG BACU004729/1-322 ARFHCKRIDV ITMQTLVLLV DIHPSVRERC LEEQKRRRQR ATRKISTFIG bmy_22086T0/1-261 ARFHCKRIDV ITMQTLVLLV DIHPSVRERC LEEQKRRRQR ATKKISTFIG 251 300 ENSBTAP00000042711/1-339 TFLVCFAPYV ITRLVELSSA VPISSHWGVL SKCLAYSKAA SDPFVYSLLR ENSP00000284674/1-337 TFLVCFAPYV ITRLVELFST VPIGSHWGVL SKCLAYSKAA SDPFVYSLLR ENSTTRP00000014777/1-337 TFLVCFAPYV ITRLVELSSA VPISSHWGVL SKCLAYSKAA SDPFVYSLLR BACU004729/1-322 TFLVCFAPYV ITRLLELSSA VPISSHWGVL SKCLAYSKAA SDPFVYSLLR bmy_22086T0/1-261 TFLVCFAPYV ITR------- ---------- ---------- ---------- 301 350 ENSBTAP00000042711/1-339 HQYRKSCKEI LNRVLHRRSL RSSGLTGDSH SQNILPVSE ENSP00000284674/1-337 HQYRKSCKEI LNRLLHRRSI HSSGLTGDSH SQNILPVSE ENSTTRP00000014777/1-337 HQYRKSCKEI LNRVLHRRSL RSSGLTRDSH SQNILPASE BACU004729/1-322 HQYRESCKDI LSRVLHRRPL RSSGLTGDSH SQNILPVSE bmy_22086T0/1-261 ---------- ---------- ---------- ---------