KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:53:52 2014  Check: 00 ..

 Name: ENSP00000267328/1-234     Len:    234  Check:  7641  Weight:  1.00
 Name: ENSBTAP00000042718/1-231  Len:    234  Check:  5079  Weight:  1.00
 Name: bmy_03976T0/1-208         Len:    234  Check:  4188  Weight:  1.00
 Name: BACU017416/1-164          Len:    234  Check:  7990  Weight:  1.00

//


                          1                                                   50
ENSP00000267328/1-234     MRKPDSKIVL LGDMNVGKTS LLQRYMERRF PDTVSTVGGA FYLKQWRSYN 
ENSBTAP00000042718/1-231  MRKPDGKIVL LGDMNVGKTS LLQRYMERRF PDTVSTVGGA FYLKQWRSYN 
bmy_03976T0/1-208         MPFSSSHTYV WG-------- ---------- RDSMVPPGGP -----WRHGR 
BACU017416/1-164          ---------- ---------- ---------- ---------- ---------- 


                          51                                                 100
ENSP00000267328/1-234     ISIWDTAGRE QFHGLGSMYC RGAAAIILTY DVNHRQSLVE LEDRFLGLTD 
ENSBTAP00000042718/1-231  ISIWDTAGRE QFHGLGSMYC RGAAAVILTY DVNHAQSLLE LENRFLGLTD 
bmy_03976T0/1-208         GALPERRGRE QFHGLGSMYC RGAAAVILTY DVNHAQSLLE LEDRFLGLTD 
BACU017416/1-164          ---------- -------MYC RGAAAVILTY DVNHAQSLLE LEDRFLGLTD 


                          101                                                150
ENSP00000267328/1-234     TASKDCLFAI VGNKVDLTEE GALAGQEKEE CSPNMDAGDR VSPRAPKQVQ 
ENSBTAP00000042718/1-231  TASADCLFAV VGNKVDLSEE APGEGGQGGG RDPGQAGGGS SG---SKQVQ 
bmy_03976T0/1-208         TASADCLFAI VGNKVDLSEE GPGEGGQEGG PA---GGGGC AAPRLPKQVQ 
BACU017416/1-164          TASADCLFAI VGNKVDLSEE GPGEGGQEGG TA---GGGGG AAPRLPKQVQ 


                          151                                                200
ENSP00000267328/1-234     LEDAVALYKK ILKYKMLDEQ DVPAAEQMCF ETSAKTGYNV DLLFETLFDL 
ENSBTAP00000042718/1-231  LEDAMAFYKK ILKYKMLDEK DVPAAEQMCF ETSAKTGKNV DLLFETVFDM 
bmy_03976T0/1-208         PEDAVAFYKK ILKYKMLDEK DVPAAEQMCF ETSAKTGHNV DLLFETLFDM 
BACU017416/1-164          PEDAVAFYKK ILKYKMLDEK DVPAAEQMCF ETSAKTGHNV DLLFETLFDM 


                          201                                                250
ENSP00000267328/1-234     VVPMILQQRA ERPSHTVDIS SHKPPKRTRS GCCA 
ENSBTAP00000042718/1-231  VVPVILRQRA QAPPQTVDIA SAPPPARTRS GCCS 
bmy_03976T0/1-208         VVPVILQQRA QGPPQTVDIA SSRPPARTRS GCCA 
BACU017416/1-164          VVPVILQQRA QGPPQTVDIA SSRPPARTSS GCCA