KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:53:52 2014 Check: 00 .. Name: ENSP00000364349/1-703 Len: 749 Check: 7885 Weight: 1.00 Name: ENSBTAP00000042742/1-707 Len: 749 Check: 9368 Weight: 1.00 Name: bmy_03120T0/1-725 Len: 749 Check: 9577 Weight: 1.00 Name: ENSTTRP00000005636/1-671 Len: 749 Check: 12 Weight: 1.00 // 1 50 ENSP00000364349/1-703 MAELMLLSEI ADPTRFFTDN LLSPEDWG-- ---------- ---------- ENSBTAP00000042742/1-707 MAELMLLSEI ADPTRFFTDN LLSPEDW--- ---------- ---------- bmy_03120T0/1-725 MAELMLLSEI ADPTRFFTDN LLSPEDWGAR MGGRWVWPSR ANEGWVEGFV ENSTTRP00000005636/1-671 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000364349/1-703 ---------- ------LQNS TLYSGLDEVA EEQTQLFRCP EQDVPFDGSS ENSBTAP00000042742/1-707 ---------- --------DS TLYAGLDEVA EEQTELFRCP EQDVPFGSSS bmy_03120T0/1-725 WIRRLRYRKT XRPSAPLADS TLYAGLDEAA EEQTQLFLCP EQDVPFGSSS ENSTTRP00000005636/1-671 ---------- ---------S TLYTGLDEVA EEQTQLFLCP EQDVPFDSSS 101 150 ENSP00000364349/1-703 LDVGMDVSPS EPPWELLPIF PDLQVKSEPS SPCSSSSLSS ESSRLSTEPS ENSBTAP00000042742/1-707 LDLGMDVSPP EPPWDSLPIF PDLQVKSEPS SPCSSSSLSS ESSHLSTEPS bmy_03120T0/1-725 LDLGMDVSPP EPPWDSLPIF PDLQVKSEPS SPCSSSSLSS ESSRLSTEPS ENSTTRP00000005636/1-671 LDLEMDVSPP EPPWDSLPIF PDLQVKSEPS SPSSSSSLSS ESSRLSAEPS 151 200 ENSP00000364349/1-703 SEALGVGEVL HVKTESLAPP LCLLGDDPTS SFETVQINVI PTSDDSSDVQ ENSBTAP00000042742/1-707 NQAPGVGEML VVKSESLAPP LCLLGDDPTS PFETIQINVS TISDDPSDVQ bmy_03120T0/1-725 SQASGVGEVL VVKSESLTPS LCLLGDDPTS PFETVQINVG PTSDDPSDVQ ENSTTRP00000005636/1-671 SQASGVGEVL VVKSESLTPS LCLLGDDPTS PFETVQINVG PTSDDASDVQ 201 250 ENSP00000364349/1-703 TKIEPVSPCS SVNSEASLLS ADSSSQAFIG EEVLEVKTES LSPSGCLLWD ENSBTAP00000042742/1-707 IKIEPASPSS SINSEAPLLS AESPSQAFIG EEVLEVKTES PSPQGCLLRD bmy_03120T0/1-725 IKIEPVSPSS SINSEASLLS AESPSQAFIG EEVLEVKTES PSPQGCLLRD ENSTTRP00000005636/1-671 IKIEPVSPSS SINSEASLLS AESPNQAFIG EEVLEVKTES PSPQGCLLRD 251 300 ENSP00000364349/1-703 VPAPSLGAVQ ISMGPSLDGS SGKALPTRKP PLQPKPVVLT TVPMPSRAVP ENSBTAP00000042742/1-707 VPGPSPGAVQ ISMGLSSDGS SGKALPARKP PLQPKPMLIT TVPIPPRAVP bmy_03120T0/1-725 VSGPPLGAVQ ISMGLSSDGS SGKPLPARKP PLQPKPVVIT TVPMPPRAVP ENSTTRP00000005636/1-671 VSGPPLGAVQ ISMGLSSDGS SGKPLPARKP PLQPKPVVIT TVPMPPRAVP 301 350 ENSP00000364349/1-703 PSTTVLLQSL VQPPPVSPVV LIQGAIRVQP EGPAPSLPRP ERKSIVPAPM ENSBTAP00000042742/1-707 ASTTVLLQPL VQPPPVSPVV LIQGTVRVQP EGPTPPPPRP ERKSIVPAPM bmy_03120T0/1-725 PSTTVLLQPL VQPPPVSPVV LIQGAIRVQP EGLTPPAPRP ERKSIVPAPM ENSTTRP00000005636/1-671 PSTTVLLQPL VQPPPVSPVV LIQGAIRVQP EGLTPPAPRP ERKSIVPAPM 351 400 ENSP00000364349/1-703 PGNSCPPEVD AKLLKRQQRM IKNRESACQS RRKKKEYLQG LEARLQAVLA ENSBTAP00000042742/1-707 PGNSCPPEVD AKLLKRQQRM IKNRESACQS RRKKKEYLQG LEARLQAVLA bmy_03120T0/1-725 PGNSCPPEVD AKLLKRQQRM XKNRESACQS RRKKKEYLQG LEARLQAVLA ENSTTRP00000005636/1-671 PGNSCPPEVD AKLLKRQQRM IKNRESACQS RRKKKEYLQG LEARLQAVLA 401 450 ENSP00000364349/1-703 DNQQLRRENA ALRRRLEALL AENSELKLGS GNRKVVCIMV FLLFIAFNFG ENSBTAP00000042742/1-707 DNQQLRRENA ALRRRLEALL TENSELKLGS GNRKVVCVMV FLLFIAFNFG bmy_03120T0/1-725 DNQQLRRENA ALRRRLEALL AENSELKLGS GNRKVVCIMV FLLFIAFNFG ENSTTRP00000005636/1-671 DNQQLRRENA ALRRRLEALL AENSELKLGS GNRKVVCIMV FLLFIAFNFG 451 500 ENSP00000364349/1-703 PVSISEPPSA PISPRMNKGE PQPRRHLLGF SEQEPVQGVE PLQGSSQGPK ENSBTAP00000042742/1-707 PVSISEPPPA SISPRMSRGE SRPRRHLLEF SAQEPVHGAE PRQHPFQDPE bmy_03120T0/1-725 PVSISEPPPA PISPRMSREE PRPQRHLLEF SAQEPVHGVE HPQHPSQGPK ENSTTRP00000005636/1-671 PVSISEPPPA PISPRMSREE PRPQRHLLEF SAQEPVHRVE HPQHPSQGPK 501 550 ENSP00000364349/1-703 EPQPSPTDQP SFSNLTAFPG GAKELLLRDL DQLFLSSDCR HFNRTESLRL ENSBTAP00000042742/1-707 EPQPSPAGHP SFRNLTAFPG DTRELLLRDL DQLFLSSDCR HFNRTESLRL bmy_03120T0/1-725 ETQPSSTGPP SFRNLTAFPG GTKELLLRDL DQLFLSSDCR HFNRTESLRY ENSTTRP00000005636/1-671 ETQPSSTGQP SFRNLTAFPG GTKELLLRDL DQLFLASDCR HFNRTESLRL 551 600 ENSP00000364349/1-703 ADELSGWVQR HQRGRRKIPQ RAQERQKSQP RKKSPPVKAV PIQPPGPPER ENSBTAP00000042742/1-707 ADELSGWVQR HQRGRRKTPQ RAQEKQKSQF RKKSPPVQAV PTRPPGPPEG bmy_03120T0/1-725 FS-------- ---------- ----FQKSQL WKKSPPVKAV PTQPPGPPER ENSTTRP00000005636/1-671 ADELSGWVQR HQRGRRKMPQ RPQERQKSQL WKKSPPVKAV PTQPPGPPER 601 650 ENSP00000364349/1-703 DSVGQLQLYR HPDRSQPAFL DAIDRREDTF YVVSFRRDHL LLPAISHNKT ENSBTAP00000042742/1-707 DSVGQLQLYR QPDRSQPEFL DAIDRREDTF YVVSFRRDHL LLPAISHNKT bmy_03120T0/1-725 DSVGQLQLYR QPDRSQPEFL DAIDRREDTF YVVSFRRDHL LLPAISHNKT ENSTTRP00000005636/1-671 DAVGQLQLYR QPDRSQPEFL DAIDRREDTF YVVSFRRDHL LLPAISHNKT 651 700 ENSP00000364349/1-703 SRPKMSLVMP AMAPNETLSG RGAPGDYEEM MQIECEVMDT RVIHIKTSTV ENSBTAP00000042742/1-707 SRPKMSLVMP AMAPNETLSG RGPPGDYEEM MQIECEVMDT RVIHIKTSTV bmy_03120T0/1-725 SRPKMSLVMP AMAPNETLSG RGPPGDYEEM MQIECEVMDT RVIHIKTSTV ENSTTRP00000005636/1-671 SRPKMSLVMP AMAPNETLSG RGPPGDYEEM MQIECEVMDT RVIHIKTSTV 701 750 ENSP00000364349/1-703 PPSLRKQPSP TPGNATGGPL PVS-AASQAH QASHQP---- ---LYLNHP ENSBTAP00000042742/1-707 PPSLRKQPSS TPGNATGGPL PASAAASQAH QAAHQPSTSI ISDLYDSH- bmy_03120T0/1-725 PPSLRKQPSS TPGNATGGPL PAS-AASQAH QAARQPSTSI IPDLYDSH- ENSTTRP00000005636/1-671 PPSLRKQPSS SPGNATGGPL PAS-AASQAH QAARQP---- ----YLNHP