KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:53 2014 Check: 00 .. Name: ENSP00000326817/1-239 Len: 252 Check: 1525 Weight: 1.00 Name: BACU004939/1-169 Len: 252 Check: 3048 Weight: 1.00 Name: ENSBTAP00000042745/1-214 Len: 252 Check: 3460 Weight: 1.00 Name: bmy_15857T0/1-239 Len: 252 Check: 2246 Weight: 1.00 Name: ENSTTRP00000002404/1-240 Len: 252 Check: 2883 Weight: 1.00 // 1 50 ENSP00000326817/1-239 MGNSALRAHV ETAQKTGVFQ LKDRGLTEFP ADLQKLTSNL RTIDLSNNKI BACU004939/1-169 MGNSALRAHV ETAQKTGVFQ LKDRGLTE-- ---------- ---------- ENSBTAP00000042745/1-214 MGNSALRAHV ETAQKTGVFQ LKDRGLTEFP SELQKLTSNL RTIDLSNNKI bmy_15857T0/1-239 MGNSALRAHV ETAQKTGVFQ LKDRGLTEFP SELQKLTSNL RTIDLSNNKI ENSTTRP00000002404/1-240 MGNSALRAHV ETAQKTGVFQ LKDRGLTEFP SELQKLTSNL RTIDLSNNKI 51 100 ENSP00000326817/1-239 ESLPPLLIGK FTLLKSLSLN NNKLTVLPDE ICNLKKLETL SLNNNHLREL BACU004939/1-169 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000042745/1-214 ENLPPMIIGK FTLLKSLSLN NNKLTALPDE LCNLKKLETL SLNNNQLREL bmy_15857T0/1-239 ESLPPMIIGK FTLLKSLSLN NNKLTVLPDE LCNLKKLETL SLNNNQLREL ENSTTRP00000002404/1-240 ESLPPMIIGK FTLLKSLSLN NNKLTVLPDE LCNLKKLETL SLNNNHLREL 101 150 ENSP00000326817/1-239 PSTFGQLSAL KTLSLSGNQL GALPPQLCSL RHLDVMDLSK NQIRSIPDSV BACU004939/1-169 ---------- -TLSLSGNQL RALPPQLCNL RHLDVVDLSK NQIRSIPDTV ENSBTAP00000042745/1-214 PSTFGQLSAL KTLSLSGNQL RALPPQLCSL RHLDVVDLSK NQIRSILDTV bmy_15857T0/1-239 PSTFGQLSAL KTLSLSGNQL RALPPQLCNL RHLDVVDLSK NQIRSIPDTV ENSTTRP00000002404/1-240 PSTFGQLSAL KTLSLSGNQL RALPSQLCNL RHLDVVDLSK NQIRSIPDTV 151 200 ENSP00000326817/1-239 GELQVIELNL NQNQISQISV KISCCPRLKI LRLEENCLEL SMLPQSILSD BACU004939/1-169 QELQVIELNL NQNQIAQISV KISCCPRLKV LRLEENCLEL SMLPQSILSD ENSBTAP00000042745/1-214 GELQVIELNL NQNQISQISV KISSCPRLKV LRLEENCLEL SMLPQSILSD bmy_15857T0/1-239 RELQVIELNL NQNQIAQISV KISCCPRLKV LRLEENCLEL SMLPQSILSD ENSTTRP00000002404/1-240 QELQVIELNL NQNQIAQISV KISCCPRLKV LRLEENCLEL SMLPQSILSD 201 250 ENSP00000326817/1-239 SQICLLAVEG NLFEIKKLRE LEGYDKYMER FTATK----- -------KKF BACU004939/1-169 SQICLLAVEG NLFEIKKLRE LEGYDKPLKV PMLTLSPPVS GLQFSLINTF ENSBTAP00000042745/1-214 SQICLLAVEG NLFE------ ---------- ---------- ---------- bmy_15857T0/1-239 SQICLLAVEG NLFEIKKLRE LEGYDKYMER FTATK----- -------KKF ENSTTRP00000002404/1-240 SQICLLAVEG NLFEIKKLRE LEGYDKYMER FPATK----- -------NKF 251 300 ENSP00000326817/1-239 A- BACU004939/1-169 SR ENSBTAP00000042745/1-214 -- bmy_15857T0/1-239 A- ENSTTRP00000002404/1-240 AR