KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:57 2014 Check: 00 .. Name: ENSTTRP00000004836/1-493 Len: 585 Check: 932 Weight: 1.00 Name: ENSP00000324404/1-498 Len: 585 Check: 4858 Weight: 1.00 Name: ENSBTAP00000042791/1-500 Len: 585 Check: 2058 Weight: 1.00 Name: bmy_08294T0/1-566 Len: 585 Check: 5215 Weight: 1.00 Name: BACU008385/1-499 Len: 585 Check: 4788 Weight: 1.00 // 1 50 ENSTTRP00000004836/1-493 ---------- ---------- ---------- ---------- ----MALPTL ENSP00000324404/1-498 ---------- ---------- ---------- ---------- ----MALPTL ENSBTAP00000042791/1-500 ---------- ---------- ---------- ---------- ----MALPTL bmy_08294T0/1-566 NERGNGQCRR SSTREGRCGP GRARLGHAAA RAGTAFENSG AQRNMALPTL BACU008385/1-499 ---------- ---------- ---------- ---------- ----MALPTL 51 100 ENSTTRP00000004836/1-493 PSSWCSRRLP DQQAARQQRR EQEAQLRQQW DQNSRYFKVS DICSSKQAEW ENSP00000324404/1-498 PSYWCSQQRL NQQLARQR-- EQEARLRQQW EQNSRYFRMS DICSSKQAEW ENSBTAP00000042791/1-500 PSSWCSRRLP DQQAARQRRR EQEAHLRQQW DQNSRYFQVS DICSSKQAEW bmy_08294T0/1-566 PSSWCSRRLP DQQAARQRRR EQEAQLRQQW DQNSRYFKVS DVCSSKQAEW BACU008385/1-499 PSSWCSRRLP DQQAARQRHW EQEAQLRQQW DQNSRYFKVS DVCSSKQAEW 101 150 ENSTTRP00000004836/1-493 SSKASYQRSM YAYQREKMKE EGRKRLEARR QRLRQLLAEE QDLLARELEE ENSP00000324404/1-498 SSKTSYQRSM HAYQREKMKE EKRRSLEARR EKLRQLMQEE QDLLARELEE ENSBTAP00000042791/1-500 SSRASYQRSM HAYQREKMKE EGRKRLEARR QRLRQLLVEE QDLLARQLEE bmy_08294T0/1-566 SSKASYQRSM HAYQREKMKE EGRKRLEARR QRLRQLLXEE QDLLARELEE BACU008385/1-499 SSKASYQRSM HAYQREKMKE EGRKRLEARR QRLRQLLVEE QDLLARELEE 151 200 ENSTTRP00000004836/1-493 LRLSMNLRER RIREQHRNLK SAREEQRKLI AEQLLHEHWK KNNPKLRE-- ENSP00000324404/1-498 LRLSMNLQER RIREQHGKLK SAKEEQRKLI AEQLLYEHWK KNNPKLRE-- ENSBTAP00000042791/1-500 LRLSMNLREG RIREQHGNLK AAREEQRKLI AERLLYEHWK KNNPKLRE-- bmy_08294T0/1-566 LRLSMNSRER RIREQHGNLK SAREEQRKLI AEQLLYEHWK KNNPKLREVK BACU008385/1-499 LRLSMNSRER RIREQHGNLK SAREEQRKLI AEQLLYEHWK KNNPKLRE-- 201 250 ENSTTRP00000004836/1-493 ---------- -------IEL ELHKKHVINS RYTQQEEKKQ XXXXXXXXXX ENSP00000324404/1-498 ---------- -------MEL DLHQKHVVNS WEMQKEEKKQ QEATAEQENK ENSBTAP00000042791/1-500 ---------- -------IES DLHKRHVINA WETQKEEKKQ QEAAEEEKEK bmy_08294T0/1-566 TKEILLEEVY SLPSRPQIEL ELHKKHVINS WETQKEEKKQ QEAAEEEKEK BACU008385/1-499 ---------- ---------- ---------- ---------- QEAAEEEKEK 251 300 ENSTTRP00000004836/1-493 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXAT ENSP00000324404/1-498 RYENEYERAR REALERMKAE EERRQLEDKL QAEALLQQME ELKLKEVEAT ENSBTAP00000042791/1-500 RFENEYETAR REALERMKAE EERRQLESKL QAEVLRQQME ELKAKEMEAT bmy_08294T0/1-566 RYENEYETAR REALERMKAE EERRQLEGKL QADALRQQME ELKVKEMEAT BACU008385/1-499 RYENEYETAR REALERMKAE EERRQLVGKL QADALRQQME ELKVKEMEAT 301 350 ENSTTRP00000004836/1-493 KLKKEQENLL KQRWELERLE EERKQMAALW QKAELGRFLR HQYNVQLNRR ENSP00000324404/1-498 KLKKEQENLL KQRWELERLE EERKQMEAFR QKAELGRFLR HQYNAQLSRR ENSBTAP00000042791/1-500 KLKKEQENLL KQRWELERLE EERRQMAALR QKAELGRFLR HQYNVKLNRR bmy_08294T0/1-566 KLKKEQENLL KQRWELERLE EERKQVAALW QKAELGRFLR HQYNVQLNRR BACU008385/1-499 KLKKEQENLL KQRWELERLE EERKQMAALW QKAELGRFLR HQYNVQLNRR 351 400 ENSTTRP00000004836/1-493 TQQIQEELEA DRRILQALLK EEDETQRVHL ARREQAQADV AWMKRVIEEQ ENSP00000324404/1-498 TQQIQEELEA DRRILQALLE KEDESQRLHL ARREQVMADV AWMKQAIEEQ ENSBTAP00000042791/1-500 TQQIQEELEA DKRILQALLE EEDENQRVHQ ARREQALADV AWMKRVIEEQ bmy_08294T0/1-566 TQQIQEELEA DGRILQALLE EEDENQRAHL ARREQAQADV AWMKRVIEEQ BACU008385/1-499 TQQIQEELEA DRRILQALLE EEDENQRAHL ARREQAQADV AWMKRVIEEQ 401 450 ENSTTRP00000004836/1-493 LQLERAREA- ------EEAK EMWEKREAEW ARERSARDRL MSEVLTGRQK ENSP00000324404/1-498 LQLERAREAE LQMLLREEAK EMWEKREAEW ARERSARDRL MSEVLTGRQQ ENSBTAP00000042791/1-500 LELERAREAE LQMLLREEAK EVWEKREAEW ARERSARDRL MSEVLTGRQQ bmy_08294T0/1-566 LQLERAREAE LQMLLREEAK EMWEKREAEW ARERSARDRL MSEVLTGRRQ BACU008385/1-499 LQLERAREAE LQMLLREEAK EMWEKREAEW ARERSARDRL MSEVLTGRRQ 451 500 ENSTTRP00000004836/1-493 QIQEKIEQNR REQEESLRHR EQLIRDLEEA RESAHREKKE SEELKSARKQ ENSP00000324404/1-498 QIQEKIEQNR RAQEESLKHR EQLIRNLEEV RELARREKEE SEKLKSARKQ ENSBTAP00000042791/1-500 QIQEKIEQNR RAQEESLRHR EQLIQDLEEA RELARREKEE SEELKSARKQ bmy_08294T0/1-566 QIQEKIEQNR REQEESLRHR EQLIRDLEEA RESAHREKEE SEELKSARKQ BACU008385/1-499 QIQEKIEQNR REQEESLRHR EQLIRDLEEA RESAHREKEE SEELKSARKQ 501 550 ENSTTRP00000004836/1-493 ELEAQVAERQ LQAWEADQQE EEEEEEARQA EQLTDALLQQ EAKMMTEQGY ENSP00000324404/1-498 ELEAQVAERR LQAWEADQQE EEEEEEARRV EQLSDALLQQ EAETMAEQGY ENSBTAP00000042791/1-500 ELEAQVAERQ LQAWEADQQE KEEEEEARRE EQLTAALLQQ EAKMMAKQGY bmy_08294T0/1-566 ELEAQVAERQ LQAWEADQQE EEEEEEARQA EQLTDALLRQ EAKMMAEQGY BACU008385/1-499 ELEAQVAERQ LQAWEADQQE EEEEEEARQA EQLTDALLRQ EAKMMAEQGY 551 600 ENSTTRP00000004836/1-493 RPKPY----- ------GHPR IA----WN-- ----- ENSP00000324404/1-498 RPKPY----- ------GHPK IA----WN-- ----- ENSBTAP00000042791/1-500 RPKPY----- ------GHPR IA----WN-- ----- bmy_08294T0/1-566 RPKDQ----- -----DPNPP LA----YQAP ----- BACU008385/1-499 RPKGTLTQRL FRSFIGPQAA LVATLLWLLP LQPKD