KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:57 2014 Check: 00 .. Name: BACU008991/1-401 Len: 430 Check: 2482 Weight: 1.00 Name: ENSP00000295228/1-407 Len: 430 Check: 9126 Weight: 1.00 Name: ENSBTAP00000042801/1-408 Len: 430 Check: 8195 Weight: 1.00 Name: bmy_18643T0/1-320 Len: 430 Check: 666 Weight: 1.00 Name: ENSTTRP00000013384/1-407 Len: 430 Check: 6292 Weight: 1.00 // 1 50 BACU008991/1-401 MAGVE----- ---LIVPRSG AKGK------ ---------- -----LNVST ENSP00000295228/1-407 MDGLPGRALG AACLLLLAAG WLGPEAWGSP TPPPTPAAP- PPPPPPGSPG ENSBTAP00000042801/1-408 MDGLPGRALG AACLLMLAVG SLGPGVWGSP TPPPLPAAPQ PPPPPPGAPG bmy_18643T0/1-320 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013384/1-407 MDGLPGRALG AACLLLLAAG WLGPEAWGSP TPPPSPAAP- PPPLPPGAPG 51 100 BACU008991/1-401 DLEDTCTSCG GFRRPEELGR VDGDFLEAVK RHILNRLQMR GRPNITHAVP ENSP00000295228/1-407 GSQDTCTSCG GFRRPEELGR VDGDFLEAVK RHILSRLQMR GRPNITHAVP ENSBTAP00000042801/1-408 GSQDTCTSCG GFRRPEELGR VDGDFLEAVK RHILNRLQMR GRPNITHAVP bmy_18643T0/1-320 ---------- ---------- ---------- --------MR GRPNITHAVP ENSTTRP00000013384/1-407 GSQDTCTSCG GFRRPEELGR VDGDFLEAVK RHILNRLQMR GRPNITHAVP 101 150 BACU008991/1-401 KAAMVTALRK LHAGKVREDG RVEIPHLDGH ASPGADGQER VSEIISFAET ENSP00000295228/1-407 KAAMVTALRK LHAGKVREDG RVEIPHLDGH ASPGADGQER VSEIISFAET ENSBTAP00000042801/1-408 KAAMVTALRK LHAGKVREDG RVEIPHLDGH ASPGADGQER VSEIISFAET bmy_18643T0/1-320 KAAMVTALRK LHAGKVREDG RVEIPHLDGH ASPGADGQER VSEIISFAET ENSTTRP00000013384/1-407 KAAMVTALRK LHAGKVREDG RVEIPHLDGH ASPGADGQER VSEIISFAET 151 200 BACU008991/1-401 DGLASSRVRL YFFISNEGNQ NLFVVQASLW LYLKLLPYVL EKGGRRKVRV ENSP00000295228/1-407 DGLASSRVRL YFFISNEGNQ NLFVVQASLW LYLKLLPYVL EKGSRRKVRV ENSBTAP00000042801/1-408 DGLASSRVRL YFFISNEGNQ NLFVVQASLW LYLKLLPYVL EKGGRRKVRV bmy_18643T0/1-320 DGLASSRVRL YFFISNEGNQ NLFVVQASLW LYLKLLPYVL EKGGRRKVRV ENSTTRP00000013384/1-407 DGLASSRVRL YFFISNEGNQ NLFVVQASLW LYLKLLPYVL EKGGRRKVRV 201 250 BACU008991/1-401 KVYFQEQGPG ERWAAVEKRV DLKRSGWHTF PLTEPVQALF ARGERRLSLD ENSP00000295228/1-407 KVYFQEQGHG DRWNMVEKRV DLKRSGWHTF PLTEAIQALF ERGERRLNLD ENSBTAP00000042801/1-408 KVYFQEQGPG DRWAAVEKRV DLKRSGWHTF PLTEPIQALF SRGERRLSLD bmy_18643T0/1-320 KVYFQEQGPG ERWAAVEKRV DLKRSGWHTF PLTEPIQALF ARGERRLSLD ENSTTRP00000013384/1-407 KVYFREQGPG ERWAAVEKRV DLKRSGWHTF PLTEPIQALF ARGERRLSLD 251 300 BACU008991/1-401 VQCDGCRELA VAPVFVHPGE ESHRPFVVVQ ARLGDSRHRI RKRGLECDGR ENSP00000295228/1-407 VQCDSCQELA VVPVFVDPGE ESHRPFVVVQ ARLGDSRHRI RKRGLECDGR ENSBTAP00000042801/1-408 VQCDSCRELA VVPVFVDPGE ESHRPFVVVQ ARLGDSRHRI RKRGLECDGR bmy_18643T0/1-320 VQCDGCRELA VAPVFVHPGE ESHRPFVVVQ ARLGDSRHRI RKRGLECDGR ENSTTRP00000013384/1-407 VQCDGCRELA VAPVFVHPGE ESHRPFVVVQ ARLGDSRHRI RKRGLECDGR 301 350 BACU008991/1-401 TNLCCRQQFF IDFRLIGWND WIIAPTGYYG NYCEGSCPAY LAGVXXXXXX ENSP00000295228/1-407 TNLCCRQQFF IDFRLIGWND WIIAPTGYYG NYCEGSCPAY LAGVPGSASS ENSBTAP00000042801/1-408 TNLCCRQQFF IDFRLIGWND WIIAPTGYYG NYCEGSCPAY LAGVPGSASS bmy_18643T0/1-320 TNLCCRQQFF IDFRLIGWND WIIAPTGYYG NYCEGSCPAY LAGVPGSASS ENSTTRP00000013384/1-407 TNLCCRQQFF IDFRLIGWND WIIAPTGYYG NYCEGSCPAY LAGVPGSASS 351 400 BACU008991/1-401 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000295228/1-407 FHTAVVNQYR MRGLNPGTVN SCCIPTKLST MSMLYFDDEY NIVKRDVPNM ENSBTAP00000042801/1-408 FHTAVVNQYR MRGLNPGTVN SCCIPTKLST MSMLYFDDEY NIVKRDVPNM bmy_18643T0/1-320 FHTAVVNQYR MRGLNPGTVN SCCIPTKLST MSMLYFDDEY NIVKRDVPNM ENSTTRP00000013384/1-407 FHTAVVNQYR MRGLNPGTVN SCCIPTKLST MSMLYFDDEY NIVKRDVPNM 401 450 BACU008991/1-401 XXXXXXXXXX XXXXXXXXXX XXXXXXXGRT ENSP00000295228/1-407 IVEECGCA-- ---------- ---------- ENSBTAP00000042801/1-408 IVEECGCA-- ---------- ---------- bmy_18643T0/1-320 IVEECGCA-- ---------- ---------- ENSTTRP00000013384/1-407 IVEECGCA-- ---------- ----------