KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:58 2014 Check: 00 .. Name: BACU004725/1-333 Len: 407 Check: 5801 Weight: 1.00 Name: ENSP00000350549/1-357 Len: 407 Check: 7580 Weight: 1.00 Name: ENSTTRP00000015349/1-357 Len: 407 Check: 7390 Weight: 1.00 Name: bmy_14537T0/1-357 Len: 407 Check: 7650 Weight: 1.00 Name: ENSBTAP00000042816/1-327 Len: 407 Check: 2102 Weight: 1.00 // 1 50 BACU004725/1-333 ---------- ------MWRP SSAPAGKEEA RG-----NGE ASRPGAQ-RP ENSP00000350549/1-357 MPEPGPDAAG TASAQPQPPP PPPPAPKESP FSIKNLLNGD HHRPPPKPQP ENSTTRP00000015349/1-357 MPEPGPDAPG TASAQPPPPP PPPPAPKESP FSIKNLLNGD HHRPPPKPQP bmy_14537T0/1-357 MPEPGPDAPS TASAQPPPPP PPPPAPKESP FSIKNLLNGD HHRPPPKPQP ENSBTAP00000042816/1-327 ---------- --SAQPPPPP PPPPAPKESP FSIKNLLNGD HHRPPPKPQP 51 100 BACU004725/1-333 ARVEPAAPRR QASLKAVSVC VCVRPSV--- ---------- ---------- ENSP00000350549/1-357 PPRTLFAPAS AAAAAAAAAA AAAKGALEGA AGFALSQVGD LAFPRFEIPA ENSTTRP00000015349/1-357 PPRTLFAPAS AAAAAAAAAA AAAKGALEGA AGFALSQVGD LAFPRFEIPA bmy_14537T0/1-357 PPRTLFAPAS AAAAAAAAAA AAAKGALEGA AGFALSQVGD LAFPRFEIPA ENSBTAP00000042816/1-327 PPRTLFAPAS AAAAAAAAAA AAAKGALEGA AGFALSQVGD LAFPRFEIPA 101 150 BACU004725/1-333 ---------- ---------- CLSP------ ---ASEKALL RDSSPASGTD ENSP00000350549/1-357 QRFALPAHYL ERSPAWWYPY TLTPAGGHLP RPEASEKALL RDSSPASGTD ENSTTRP00000015349/1-357 QRFALPAHYL ERSPAWWYPY TLTPAGGHLP RPEASEKALL RDSSPASGTD bmy_14537T0/1-357 QRFALPAHYL ERSPAWWYPY TLTPAGGHLP RPEASEKALL RDSSPASGTD ENSBTAP00000042816/1-327 QRFALPAHYL ERSPAWWYPY TLTPAGSHLP RPEASEKALL RDSSPASGTD 151 200 BACU004725/1-333 RDSPEPLLKA DPDHKELDSK SPDEIILEES DSEEGKKEGE AAPGAAGASV ENSP00000350549/1-357 RDSPEPLLKA DPDHKELDSK SPDEIILEES DSEESKKEGE AAPGAAGASV ENSTTRP00000015349/1-357 RDSPEPLLKA DPDHKELDSK SPDEIILEES DSEEGKKEGE AAPGAAGANV bmy_14537T0/1-357 RDSPEPLLKA DPDHKELDSK SPDEIILEES DSEEGKKEGE AAPGAAGASV ENSBTAP00000042816/1-327 RDSPEPLLKA DPDHKELDSK SPDEIILEES DSEEGKKEA- ---------- 201 250 BACU004725/1-333 GAAAATPGAE DWKKGAESPE KKPACRKKKT RTVFSRSQVF QLESTFDMKR ENSP00000350549/1-357 GAAAATPGAE DWKKGAESPE KKPACRKKKT RTVFSRSQVF QLESTFDMKR ENSTTRP00000015349/1-357 GAAAATPGAE DWKKGAESPE KKPACRKKKT RTVFSRSQVF QLESTFDMKR bmy_14537T0/1-357 GAAAATPGAE DWKKGAESPE KKPACRKKKT RTVFSRSQVF QLESTFDMKR ENSBTAP00000042816/1-327 -------GTE DWKKGAESPE KKPACRKKKT RTVFSRSQVF QLESTFDMKR 251 300 BACU004725/1-333 YLSSSERAGL AASLHLTETQ VKIWFQNRRN KWKRQLAAEL EAANLSHAAA ENSP00000350549/1-357 YLSSSERAGL AASLHLTETQ VKIWFQNRRN KWKRQLAAEL EAANLSHAAA ENSTTRP00000015349/1-357 YLSSSERAGL AASLHLTETQ VKIWFQNRRN KWKRQLAAEL EAANLSHAAA bmy_14537T0/1-357 YLSSSERAGL AASLHLTETQ VKIWFQNRRN KWKRQLAAEL EAANLSHAAA ENSBTAP00000042816/1-327 YLSSSERAGL AASLHLTETQ VKIWFQNRRN KWKRQLAAEL EAANLSHAAA 301 350 BACU004725/1-333 QRIVRVPILY HENSAAEGAA AAAAGAPVAS QPAAAHLPAP RVLLSPGGLV ENSP00000350549/1-357 QRIVRVPILY HENSAAEGAA AAAAGAPVPV SQPLLTFPHP VYYSHP---V ENSTTRP00000015349/1-357 QRIVRVPILY HENSAAEGAA AAAAGAPVPV SQPLLTFPHP VYYSHP---V bmy_14537T0/1-357 QRIVRVPILY HENSAAEGAA AAAAGAPVPV SQPLLTFPHP VYYSHP---V ENSBTAP00000042816/1-327 QRIVRVPILY HENSAAEGAA AAAAGAPVPV SQPLLTFPHP VYYSHP---V 351 400 BACU004725/1-333 RAAAPARLRP ERGGGGSARP PSQTPEETGP GRGHRDLQRP SGTGASARGS ENSP00000350549/1-357 VSSVP----- ---------- ---------- ------LLRP V--------- ENSTTRP00000015349/1-357 VSSVP----- ---------- ---------- ------LLRP V--------- bmy_14537T0/1-357 VSSVP----- ---------- ---------- ------LLRP V--------- ENSBTAP00000042816/1-327 VSSVP----- ---------- ---------- ------LLRP V--------- 401 450 BACU004725/1-333 GLPSPNR ENSP00000350549/1-357 ------- ENSTTRP00000015349/1-357 ------- bmy_14537T0/1-357 ------- ENSBTAP00000042816/1-327 -------