KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:53:58 2014 Check: 00 .. Name: ENSBTAP00000042822/1-459 Len: 459 Check: 9126 Weight: 1.00 Name: ENSP00000364677/1-459 Len: 459 Check: 8447 Weight: 1.00 Name: bmy_03127T0/1-281 Len: 459 Check: 8681 Weight: 1.00 Name: BACU015882/1-108 Len: 459 Check: 9515 Weight: 1.00 // 1 50 ENSBTAP00000042822/1-459 MASGVEVLRF QLPGHEAATL RNMNQLRAEE RFCDVTIVAD SLKFRGHKVI ENSP00000364677/1-459 MASGVEVLRF QLPGHEAATL RNMNQLRAEE RFCDVTIVAD SLKFRGHKVI bmy_03127T0/1-281 ---------- ---------- ---------- ---------- ---------- BACU015882/1-108 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000042822/1-459 LAACSPFLRD QFLLNPSSEL QVSLMHSARI VADLLLSCYT GALEFAVRDI ENSP00000364677/1-459 LAACSPFLRD QFLLNPSSEL QVSLMHSARI VADLLLSCYT GALEFAVRDI bmy_03127T0/1-281 ---------- ---------- ---------- ---------- ---------- BACU015882/1-108 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000042822/1-459 VNYLTAASYL QMEHVVEKCR NALSQFIEPK IGLKEDGVSD ASLVSSVSAT ENSP00000364677/1-459 VNYLTAASYL QMEHVVEKCR NALSQFIEPK IGLKEDGVSE ASLVSSISAT bmy_03127T0/1-281 ---------- ---------- ---------- ---------- ---------- BACU015882/1-108 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000042822/1-459 KSLLPPARTP KPAPKPPPPP PLPPPLLRPV KLEFPLDEDL ELKAEEEDED ENSP00000364677/1-459 KSLLPPARTP KPAPKPPPPP PLPPPLLRPV KLEFPLDEDL ELKAEEEDED bmy_03127T0/1-281 ---------- ---------- --------MW GLEFPLDEDL ELKAEEEDED BACU015882/1-108 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000042822/1-459 EDEDVSDICI VKVESALEVA HRLKPPGGLG GGLGIGGSVG SHLGELAQSS ENSP00000364677/1-459 EDEDVSDICI VKVESALEVA HRLKPPGGLG GGLGIGGSVG GHLGELAQSS bmy_03127T0/1-281 EDEDVSDICI VKVESALEVA HRLKPPGGLG GGLGIGGSVG SHLGELAQSS BACU015882/1-108 ---------- ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000042822/1-459 VPPSTVAPPQ GVVKACYSLS EDAEGEGLLL IPGGRASVGA TSGLVEAAAV ENSP00000364677/1-459 VPPSTVAPPQ GVVKACYSLS EDAEGEGLLL IPGGRASVGA TSGLVEAAAV bmy_03127T0/1-281 VPPSTVAPPQ GVVKACYSLS EDAEGEGLLL IPGGRASVGA TSGLVEAAAV BACU015882/1-108 ---------- ---------- ---------- ---------- ---------- 301 350 ENSBTAP00000042822/1-459 AMAARGAGGS LGAGGGRGPL PGGFSSGNPL KNIKCTKCPE VFQGVEKLVF ENSP00000364677/1-459 AMAARGAGGS LGAGGSRGPL PGGFSGGNPL KNIKCTKCPE VFQGVEKLVF bmy_03127T0/1-281 AMAARGAGGS LGAGGSRGPL PGGFSSGNPL KNIKCTKCPE VFQGVEKLVF BACU015882/1-108 ---------- ---------- ---------- ---------- ---------- 351 400 ENSBTAP00000042822/1-459 HMRAQHFIFM CPRCGKQFNH SSNLNRHMNV HRGVKSHSCG ICGKCFTQKS ENSP00000364677/1-459 HMRAQHFIFM CPRCGKQFNH SSNLNRHMNV HRGVKSHSCG ICGKCFTQKS bmy_03127T0/1-281 HMRAQHFIFM CPRCGKQFNH SSNLNRHMNV HRGVKSHSCG ICGKCFTQKS BACU015882/1-108 -MRAQHFIFM CPRCGKQFNH SSNLNRHMNV HRGVKSHSCG ICGKCFTQKS 401 450 ENSBTAP00000042822/1-459 TLHDHLNLHS GARPYRCSYC DVRFAHKPAI RRHLKEQHGK TTAENVLEAS ENSP00000364677/1-459 TLHDHLNLHS GARPYRCSYC DVRFAHKPAI RRHLKEQHGK TTAENVLEAS bmy_03127T0/1-281 TLHDHLNLHS GARPYRCSYC DVRFAHKPAI RRHLKEQHGK TTAENVLEAS BACU015882/1-108 TLHDHLNLHS GARPYRCSYC DVRFAHKPAI RRHLKEQHGK TTAENVLEAS 451 500 ENSBTAP00000042822/1-459 VAEINVLIR ENSP00000364677/1-459 VAEINVLIR bmy_03127T0/1-281 VAEINVLIR BACU015882/1-108 VAEINVLIR