KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:53:59 2014 Check: 00 .. Name: ENSTTRP00000009930/1-1046 Len: 1070 Check: 2811 Weight: 1.00 Name: BACU015416/1-1046 Len: 1070 Check: 3540 Weight: 1.00 Name: bmy_08427T0/1-1000 Len: 1070 Check: 573 Weight: 1.00 Name: ENSP00000362824/1-1046 Len: 1070 Check: 2688 Weight: 1.00 Name: ENSBTAP00000042834/1-1036 Len: 1070 Check: 6343 Weight: 1.00 // 1 50 ENSTTRP00000009930/1-1046 MASSVGNVAD STEPTKRMLS FQGLAELAHR EYQAGDFEAA ERHCMQLWRQ BACU015416/1-1046 MASSVGNVAD STDPTKRMLS FQGLAELTQR AYQAGDFEAA ERHCMQLWRQ bmy_08427T0/1-1000 MASSVGNVAD STEPTKRMLS FQGLAELAHR EYQAGDFEAA ERHCMQLWRQ ENSP00000362824/1-1046 MASSVGNVAD STEPTKRMLS FQGLAELAHR EYQAGDFEAA ERHCMQLWRQ ENSBTAP00000042834/1-1036 MASSVGNVAD ST-------- --GLAELAHR EYQAGDFEAA ERHCMQLWRQ 51 100 ENSTTRP00000009930/1-1046 EPDNTGVLLL LSSIHFQCRR LDRSAHFSTL AIKQNPLLAE AYSNLGNVYK BACU015416/1-1046 EPDNTGVLLL LSSIHFRCRR LDGSAHFSSL AIKKNPLLAE AYSNLGNVYK bmy_08427T0/1-1000 EPDNTGVLLL LSSIHFQCRR LDRSAHFSTL AIKQNPLLAE AYSNLGNVYK ENSP00000362824/1-1046 EPDNTGVLLL LSSIHFQCRR LDRSAHFSTL AIKQNPLLAE AYSNLGNVYK ENSBTAP00000042834/1-1036 EPDNTGVLLL LSSIHFQCRR LDRSAHFSTL AIKQNPLLAE AYSNLGNVYK 101 150 ENSTTRP00000009930/1-1046 ERGQLQEAIE HYRHALRLKP DFIDGYINLA AALVAAGDME GAVQAYVSAL BACU015416/1-1046 ESGQLQEAIE HYRHALRLKP DFIDGYINLA AALVAAGDME GAVQAYASAL bmy_08427T0/1-1000 ERGQLQEAIE HYRHALRLKP DFIDGYINLA AALVAAGDME GAVQAYVSAL ENSP00000362824/1-1046 ERGQLQEAIE HYRHALRLKP DFIDGYINLA AALVAAGDME GAVQAYVSAL ENSBTAP00000042834/1-1036 ERGQLQEAIE HYRHALRLKP DFIDGYINLA AALVAAGDME GAVQAYVSAL 151 200 ENSTTRP00000009930/1-1046 QYNPDLYCVR SDLGNLLKAL GRLEEAK--- ---------- ---------- BACU015416/1-1046 QYNPDLYCVC SDLGNLLKAL GRLEEAK--- ---------- ---------- bmy_08427T0/1-1000 QYNPDLYCVR SDLGNLLKAL GRLEEAKHSA LLMMRCDPAV AQRLRSVNAQ ENSP00000362824/1-1046 QYNPDLYCVR SDLGNLLKAL GRLEEAK--- ---------- ---------- ENSBTAP00000042834/1-1036 QYNPDLYCVR SDLGNLLKAL GRLEEAK--- ---------- ---------- 201 250 ENSTTRP00000009930/1-1046 -ACYLKAIET QPNFAVAWSN LGCVFNAQGE IWLAIHHFEK AVTLDPNFLD BACU015416/1-1046 -ACYLKAIET QPNFAVAWSN LACVFNAQGE IWLAIHHFEK AVTHDPNFLD bmy_08427T0/1-1000 CACYLKAIET QPNFAVAWSN LGCVFNAQGE IWLAIHHFEK AVTLDPNFLD ENSP00000362824/1-1046 -ACYLKAIET QPNFAVAWSN LGCVFNAQGE IWLAIHHFEK AVTLDPNFLD ENSBTAP00000042834/1-1036 -ACYLKAIET QPNFAVAWSN LGCVFNAQGE IWLAIHHFEK AVTLDPNFLD 251 300 ENSTTRP00000009930/1-1046 AYINLGNVLK EARIFDRAVA AYLRALSLSP NHAVVHGNLA CVYYEQGLID BACU015416/1-1046 AYINLGNVFK EARIFERAVA AYLRALSLSP NHAVVHGSLA CVYYEQGLID bmy_08427T0/1-1000 AYINLGNVLK EARIFDRAVA AYLRALSLSP NHAVVHGNLA CVYYEQGLID ENSP00000362824/1-1046 AYINLGNVLK EARIFDRAVA AYLRALSLSP NHAVVHGNLA CVYYEQGLID ENSBTAP00000042834/1-1036 AYINLGNVLK EARIFDRAVA AYLRALSLSP NHAVVHGNLA CVYYEQGLID 301 350 ENSTTRP00000009930/1-1046 LAIDTYRRAI ELQPHFPDAY CNLANALKEK GSVAEAEDCY NTALRLCPTH BACU015416/1-1046 LAIDTYRRAI ELQPHFPDAY CNLANALKEK GSVAEAEDCY STALWLCPTH bmy_08427T0/1-1000 LAIDTYRRAI ELQPHFPDAY CNLANALKEK GSVAEAEDCY NTALRLCPTH ENSP00000362824/1-1046 LAIDTYRRAI ELQPHFPDAY CNLANALKEK GSVAEAEDCY NTALRLCPTH ENSBTAP00000042834/1-1036 LAIDTYRRAI ELQPHFPDAY CNLANALKEK GSVAEAEDCY NTALRLCPTH 351 400 ENSTTRP00000009930/1-1046 ADSLNNLANI KREQGNIEEA VRLYRKALEV FPEFAAAHSN LASVLQQQGK BACU015416/1-1046 ADSLNNLANT KREQGNTEEA VRLYCKALEV FPEFAAAHSN LASVLQQQGK bmy_08427T0/1-1000 ADSLNNLANI KREQGNIEEA VRLYRKALEV FPEFAAAHSN LASVLQQQGK ENSP00000362824/1-1046 ADSLNNLANI KREQGNIEEA VRLYRKALEV FPEFAAAHSN LASVLQQQGK ENSBTAP00000042834/1-1036 ADSLNNLANI KREQGNIEEA VRLYRKALEV FPEFAAAHSN LASVLQQQGK 401 450 ENSTTRP00000009930/1-1046 LQEALMHYKE AIRISPTFAD AYSNMGNTLK EMQDVQGALQ CYTRAIQINP BACU015416/1-1046 VQEALMHYKE AIRISPTFAE AYCNMGNTLT GMQDVQGALQ CYTRAIQIDP bmy_08427T0/1-1000 LQEALMHYKE AIRISPTFAD AYSNMGNTLK EMQDVQGALQ CYTRAIQINP ENSP00000362824/1-1046 LQEALMHYKE AIRISPTFAD AYSNMGNTLK EMQDVQGALQ CYTRAIQINP ENSBTAP00000042834/1-1036 LQEALMHYKE AIRISPTFAD AYSNMGNTLK EMQDVQGALQ CYTRAIQINP 451 500 ENSTTRP00000009930/1-1046 AFADAHSNLA SIHKDSGNIP EAIASYRTAL KLKPDFPDAY CNLAHCLQIV BACU015416/1-1046 AFAEAHSNLA SIHQDSGNIP EAIASYRTAL KLQPDFPDAY CNLAHCLQIV bmy_08427T0/1-1000 AFADAHSNLA SIHKDSGNIP EAIASYRTAL KLKPDFPDAY CNLAHCLQIV ENSP00000362824/1-1046 AFADAHSNLA SIHKDSGNIP EAIASYRTAL KLKPDFPDAY CNLAHCLQIV ENSBTAP00000042834/1-1036 AFADAHSNLA SIHKDSGNIP EAIASYRTAL KLKPDFPDAY CNLAHCLQIV 501 550 ENSTTRP00000009930/1-1046 CDWTDYDERM KKLVSIVADQ LEKNRLPSVH PHHSMLYPLS HGFRKAIAER BACU015416/1-1046 CDWTDYDERM KRLVTVVADQ LEKNRLPSVQ PHHSMLYLLP HGVRKAIAER bmy_08427T0/1-1000 CDWTDYDERM KKLVSIVADQ LEKNRLPS-- ---------- ---------- ENSP00000362824/1-1046 CDWTDYDERM KKLVSIVADQ LEKNRLPSVH PHHSMLYPLS HGFRKAIAER ENSBTAP00000042834/1-1036 CDWTDYDERM KKLVSIVADQ LEKNRLPSVH PHHSMLYPLS HGFRKAIAER 551 600 ENSTTRP00000009930/1-1046 HGNLCLDKIN VLHKPPYEHP KDLKLSDGRL RVGYVSSDFG NHPTSHLMQS BACU015416/1-1046 HGNLCLDNIN VLHKPPYEHP KDLKLSDGRL RVGYVSSDFG NHPTSHLMQS bmy_08427T0/1-1000 --------IN VLHKPPYEHP KDLKLSDGRL RVGYVSSDFG NHPTSHLMQS ENSP00000362824/1-1046 HGNLCLDKIN VLHKPPYEHP KDLKLSDGRL RVGYVSSDFG NHPTSHLMQS ENSBTAP00000042834/1-1036 HGNLCLDKIN VLHKPPYEHP KDLKLSDGRL RVGYVSSDFG NHPTSHLMQS 601 650 ENSTTRP00000009930/1-1046 IPGMHNPDKF EVFCYALSPD DGTNFRVKVM AEANHFIDLS QIPCNGKAAD BACU015416/1-1046 IPGMHNRDKF EVFCYALSPD DGTNFRAKVM AEADHFVDLS QIPCDGKAAD bmy_08427T0/1-1000 IPGMHNPDKF EVFCYALSPD DGTNFRVK-- ---------- -IPCNGKAAD ENSP00000362824/1-1046 IPGMHNPDKF EVFCYALSPD DGTNFRVKVM AEANHFIDLS QIPCNGKAAD ENSBTAP00000042834/1-1036 IPGMHNPDKF EVFCYALSPD DGTNFRVKVM AEANHFIDLS QIPCNGKAAD 651 700 ENSTTRP00000009930/1-1046 RIHQDGIHIL VNMNGYTKGA RNELFALRPA PIQAMWLGYP GTSGALFMDY BACU015416/1-1046 RIHQDGIHIL VNMNGYTRGA RNELFALRPA PLQAMWLGYP GTSGALFMDY bmy_08427T0/1-1000 RIHQDGIHIL VNMNGYTKGA RNELFALRPA PIQAMWLGYP GTSGALFMDY ENSP00000362824/1-1046 RIHQDGIHIL VNMNGYTKGA RNELFALRPA PIQAMWLGYP GTSGALFMDY ENSBTAP00000042834/1-1036 RIHQDGIHIL VNMNGYTKGA RNELFALRPA PIQAMWLGYP GTSGALFMDY 701 750 ENSTTRP00000009930/1-1046 IITDQETSPA EVAEQYSEKL AYMPHTFFIG DHANMFPHLK KKAVIDFKSN BACU015416/1-1046 IITDQETSPA EVAEQYSEKL AYMPHTFFIG DHANMFPHLK EKAVIDFKSN bmy_08427T0/1-1000 IITDQETSPA EVAEQYSEKL AYMPHTFFIG DHANMFPHLK KKAVIDFKSN ENSP00000362824/1-1046 IITDQETSPA EVAEQYSEKL AYMPHTFFIG DHANMFPHLK KKAVIDFKSN ENSBTAP00000042834/1-1036 IITDQETSPA EVAEQYSEKL AYMPHTFFIG DHANMFPHLK KKAVIDFKSN 751 800 ENSTTRP00000009930/1-1046 GHIYDNRIVL NGIDLKAFLD SLPDVKIVKM KCPDGGDNAD SSNTALNMPV BACU015416/1-1046 GHIYDNRIVL NGIDLKAFLD SLPDVKIVKM KCPDGGDKTD SSNIALNMPV bmy_08427T0/1-1000 GHIYDNRIVL NGIDLKAFLD SLPDVKIVKM KCPDGGDNAD SSNIALNMPV ENSP00000362824/1-1046 GHIYDNRIVL NGIDLKAFLD SLPDVKIVKM KCPDGGDNAD SSNTALNMPV ENSBTAP00000042834/1-1036 GHIYDNRIVL NGIDLKAFLD SLPDVKIVKM KCPDGGDNVD SSNTALNMPV 801 850 ENSTTRP00000009930/1-1046 IPMNTIAEAV IEMINRGQIQ ITINGFSISN GLATTQINNK AATGEEVPRT BACU015416/1-1046 IPMNTIAEAV IEMINRGQIQ ITINGFSISN GLATTQINNK AATGEEVPRT bmy_08427T0/1-1000 IPMNTIAEA- ---------- ---------- ------INNK AATGEEVPRT ENSP00000362824/1-1046 IPMNTIAEAV IEMINRGQIQ ITINGFSISN GLATTQINNK AATGEEVPRT ENSBTAP00000042834/1-1036 IPMNTIAEAV IEMINRGQIQ ITINGFSISN GLATTQINNK AATGEEVPRT 851 900 ENSTTRP00000009930/1-1046 IIVTTRSQYG LPEDAIVYCN FNQLYKIDPS TLQMWANXXX XXXXXXXXXX BACU015416/1-1046 IIVTTRSQYG LPEDAIVYCN FNQLYKIDPS TLQMWANILK RVPNSVLWLL bmy_08427T0/1-1000 IIVTTRSQYG LPEDAIVYCN FNQLYKIDPS TLQMWANILK RVPNSVLWLL ENSP00000362824/1-1046 IIVTTRSQYG LPEDAIVYCN FNQLYKIDPS TLQMWANILK RVPNSVLWLL ENSBTAP00000042834/1-1036 IIVTTRSQYG LPEDAIVYCN FNQLYKIDPS TLQMWANILK RVPNSVLWLL 901 950 ENSTTRP00000009930/1-1046 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU015416/1-1046 RFPAVGEPNI QQYVQNMGLP QNRIIFSPVA PKEEHVRRGQ LADVCLDTPL bmy_08427T0/1-1000 RFPAVGEPNI QQYAQNMGLP QNRIIFSPVA PKEEHVRRGQ LADVCLDTPL ENSP00000362824/1-1046 RFPAVGEPNI QQYAQNMGLP QNRIIFSPVA PKEEHVRRGQ LADVCLDTPL ENSBTAP00000042834/1-1036 RFPAVGEPNI QQYAQNMGLP QNRIIFSPVA PKEEHVRRGQ LADVCLDTPL 951 1000 ENSTTRP00000009930/1-1046 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU015416/1-1046 CNGHTTGMDV LWSGTPMVTM PGETLASRVA ASQLTCLGCL ELIAKNRQEY bmy_08427T0/1-1000 CNGHTTGMDV LWAGTPMVTM PGETLASRVA ASQLTCLGCL ELIAKNRQEY ENSP00000362824/1-1046 CNGHTTGMDV LWAGTPMVTM PGETLASRVA ASQLTCLGCL ELIAKNRQEY ENSBTAP00000042834/1-1036 CNGHTTGMDV LWAGTPMVTM PGETLASRVA ASQLTCLGCL ELIAKNRQEY 1001 1050 ENSTTRP00000009930/1-1046 XXXXXXXXXX XEYLKKIRGK VWKQRISSPL FNTKQYTMEL ERLYLQMWEH BACU015416/1-1046 EDIAVKLGTD LEYLKRIRGK VWKQRISSPL FNTKQYTMEL EQLYLQMWEH bmy_08427T0/1-1000 EDIAVKLGTD LEYLKRIRGK VWKQRISSPL FNTKQYTMEL ERLYLQMWEH ENSP00000362824/1-1046 EDIAVKLGTD LEYLKKVRGK VWKQRISSPL FNTKQYTMEL ERLYLQMWEH ENSBTAP00000042834/1-1036 EDIAVKLGTD LEYLKKIRGK VWKQRISSPL FNTKQYTMEL ERLYLQMWEH 1051 1100 ENSTTRP00000009930/1-1046 YAAGNKPDHM IKPVEVTESA BACU015416/1-1046 YAAGNKPDHM MKPVVVTESA bmy_08427T0/1-1000 YAAGNKPDHM IKPVEVTESA ENSP00000362824/1-1046 YAAGNKPDHM IKPVEVTESA ENSBTAP00000042834/1-1036 YAAGNKPDHM IKPVEVTESA